Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001332
CDS Infomation

pacid=37427757 polypeptide=PGSC0003DMP400000979 locus=PGSC0003DMG400000502 ID=PGSC0003DMT400001332.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGAATTGGGTAGTCTTATTTCTTGTTGTCTTTCTTCTATTGATTGAATTTTCA
TCAGCCTCAGCAACCCCTGCTGCAAAGATTGTTGGAGGGGTTGTTGCTAATGTTGCGTCT
GTGATGTTTAAGTGGGCGTGGTCACTAAAATCGACGACAAAAACAGCTGTTTCTAGCCGT
TCAATGATTAAGTTTGAGAGTGGATACGTTGTTGAAACTGTGTTTGATGGAAGCAAGATG
GGTATTGAACCTTATTCAGTGGAAGTTTCTTCAACTGGAGAAGTTCTCATTTTGGATTCT
GAGAACAGTAATGTTTATAGAGTTTCAACACCATTGTCTCGATATAGCCGTCCAAAATTG
GTTGCTGGATCTCCTGAAGGGTACTCGGGGCATGTGGATGGGAGGCTACGAGAAGCAAGG
ATGGACCATCCTAAAGGAATTGCCATGGATGATCAAGGAAATATATACGTTGCGGATACC
ATGAATATGGCAATCAGAAAAATCAGTGATGCTGGAGTTGTAACTATTGCTGGAGGAAAG
TCAGCCCGAGGTGGAGGTCATCTTGATGGGCCAAGTGAAGATGCACAATTTTCTGACGAT
TTTGATGTGGTTTTCGTTGGTAGCAGCTGCTCGCTATTAGTTATAGACAGAGGAAACCAG
GCAATTAGAGAGATACAGCTCAATGATGATGACTGTTCACACCAGTATGACGACAACAAT
CTCCAACTTGGTGTGGCACTGCTTTGTGCTGCTGTATTTTTCGGTTACATGCTGGCCTTG
TTACAACGTAGAATTGGAGCCCTTTTTTCATCGAACAGTGATGATCAGCGGGCTCCTGTC
AGAGGCATGCAACATGCACCATATCAGAGAAATATGAAGTCAGTGAGGCCTCCCATAATT
CCGTCAGAGGATGAATACGAGAAACAGGATGAAAACCTGTTTTTATCACTAGGAAGGCTT
GTTATGAACACTGGTTCGACTGTAGTTGAAATATTTGGAGGAATGTTCTCAGGTTTCAGA
AAGAACCCTTACCCCCATCATGTACAGCAGCACTACCATTACAATCACAAACAATCGAGT
ACATGGCCAGTGCAGGAAAGCTATGTAATTCGAGATGAAGATGAGGCCCCGCCCCTTGAT
ACCAGAGACCCTACACCCCGAAAAACCTATCCAATCATGAACAAAGACCCGGAGAAACCA
CGACATATCAGACAAAGTCAAGCACATTATGTAGGATGGAATGGAAATGCTGCACATGGG
CATGGCAATTTTCAGCAACAACAACAGTTTCTTCCACAAGTGTATCAGCATCACGACAAG
CACCAGTCATCAAGTCCTCAGACATACTACGAGGAAAGCTGTGAAACGAAAGAGATTGTG
TTTGGAGCAGTTCAAGAACAGGATGGACGACGTGAAACAGTGGTGATAAAAGCAGTTGAT
TATGGTGATCCTGCTTATAATAATCACAACGTTCGATCCAGGTACAACTACAGCACACGT
TACTCATTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000979
PEP Infomation

pacid=37427757 transcript=PGSC0003DMT400001332 locus=PGSC0003DMG400000502 ID=PGSC0003DMT400001332.v4.03 annot-version=v4.03
Sequence

MKRNWVVLFLVVFLLLIEFSSASATPAAKIVGGVVANVASVMFKWAWSLKSTTKTAVSSR
SMIKFESGYVVETVFDGSKMGIEPYSVEVSSTGEVLILDSENSNVYRVSTPLSRYSRPKL
VAGSPEGYSGHVDGRLREARMDHPKGIAMDDQGNIYVADTMNMAIRKISDAGVVTIAGGK
SARGGGHLDGPSEDAQFSDDFDVVFVGSSCSLLVIDRGNQAIREIQLNDDDCSHQYDDNN
LQLGVALLCAAVFFGYMLALLQRRIGALFSSNSDDQRAPVRGMQHAPYQRNMKSVRPPII
PSEDEYEKQDENLFLSLGRLVMNTGSTVVEIFGGMFSGFRKNPYPHHVQQHYHYNHKQSS
TWPVQESYVIRDEDEAPPLDTRDPTPRKTYPIMNKDPEKPRHIRQSQAHYVGWNGNAAHG
HGNFQQQQQFLPQVYQHHDKHQSSSPQTYYEESCETKEIVFGAVQEQDGRRETVVIKAVD
YGDPAYNNHNVRSRYNYSTRYSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400001332
Transcript Infomation

pacid=37427757 locus=PGSC0003DMG400000502 ID=PGSC0003DMT400001332.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGAATTGGGTAGTCTTATTTCTTGTTGTCTTTCTTCTATTGATTGAATTTTCA
TCAGCCTCAGCAACCCCTGCTGCAAAGATTGTTGGAGGGGTTGTTGCTAATGTTGCGTCT
GTGATGTTTAAGTGGGCGTGGTCACTAAAATCGACGACAAAAACAGCTGTTTCTAGCCGT
TCAATGATTAAGTTTGAGAGTGGATACGTTGTTGAAACTGTGTTTGATGGAAGCAAGATG
GGTATTGAACCTTATTCAGTGGAAGTTTCTTCAACTGGAGAAGTTCTCATTTTGGATTCT
GAGAACAGTAATGTTTATAGAGTTTCAACACCATTGTCTCGATATAGCCGTCCAAAATTG
GTTGCTGGATCTCCTGAAGGGTACTCGGGGCATGTGGATGGGAGGCTACGAGAAGCAAGG
ATGGACCATCCTAAAGGAATTGCCATGGATGATCAAGGAAATATATACGTTGCGGATACC
ATGAATATGGCAATCAGAAAAATCAGTGATGCTGGAGTTGTAACTATTGCTGGAGGAAAG
TCAGCCCGAGGTGGAGGTCATCTTGATGGGCCAAGTGAAGATGCACAATTTTCTGACGAT
TTTGATGTGGTTTTCGTTGGTAGCAGCTGCTCGCTATTAGTTATAGACAGAGGAAACCAG
GCAATTAGAGAGATACAGCTCAATGATGATGACTGTTCACACCAGTATGACGACAACAAT
CTCCAACTTGGTGTGGCACTGCTTTGTGCTGCTGTATTTTTCGGTTACATGCTGGCCTTG
TTACAACGTAGAATTGGAGCCCTTTTTTCATCGAACAGTGATGATCAGCGGGCTCCTGTC
AGAGGCATGCAACATGCACCATATCAGAGAAATATGAAGTCAGTGAGGCCTCCCATAATT
CCGTCAGAGGATGAATACGAGAAACAGGATGAAAACCTGTTTTTATCACTAGGAAGGCTT
GTTATGAACACTGGTTCGACTGTAGTTGAAATATTTGGAGGAATGTTCTCAGGTTTCAGA
AAGAACCCTTACCCCCATCATGTACAGCAGCACTACCATTACAATCACAAACAATCGAGT
ACATGGCCAGTGCAGGAAAGCTATGTAATTCGAGATGAAGATGAGGCCCCGCCCCTTGAT
ACCAGAGACCCTACACCCCGAAAAACCTATCCAATCATGAACAAAGACCCGGAGAAACCA
CGACATATCAGACAAAGTCAAGCACATTATGTAGGATGGAATGGAAATGCTGCACATGGG
CATGGCAATTTTCAGCAACAACAACAGTTTCTTCCACAAGTGTATCAGCATCACGACAAG
CACCAGTCATCAAGTCCTCAGACATACTACGAGGAAAGCTGTGAAACGAAAGAGATTGTG
TTTGGAGCAGTTCAAGAACAGGATGGACGACGTGAAACAGTGGTGATAAAAGCAGTTGAT
TATGGTGATCCTGCTTATAATAATCACAACGTTCGATCCAGGTACAACTACAGCACACGT
TACTCATTCTGA