Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001285
CDS Infomation

pacid=37427021 polypeptide=PGSC0003DMP400000954 locus=PGSC0003DMG400000489 ID=PGSC0003DMT400001285.v4.03 annot-version=v4.03
Sequence

ATGTCGAGTGACGAAAACACAGAGAAGAGCAAAAATCTAGCTGAAGCATTGGACTCTGAA
ACCCTAATGACTGATTCTGTACCTGGGTTGCTTGATGAGGTGCCTAGGGTTTCTGGTGAT
AATGGAAATGTGGATACTGGTGCTATTAGCGAGCCAGTTGTTGCTACTGAGGAGACCTCG
GAAGTGGGTAATGATGCCGATGGTGATGTGGTGGAAGTTCATGGTTCACTGGATAATGTG
AGTGGGGGAGAGCTTGCTAGTCAAGGGGCTGAAGCAGATCAAGGGCCTGGACATTTGGTT
GAGGAAATGAACGGAGAGGAGAATGTAGCTGGTGGTTCTGATGATGAGATGGTTGATGCT
GTTGATGGAGAAACTGCAGAGGATAACTCTGGGGAAGATACAATGAGTGTAAAACATGTT
TATGCAGTTGGTGACTTTGTGTGGGGCAAGATTAAGAGTCATCCGTGGTGGCCAGGGCGT
GTTTACGATGCTTCCGCTGCCTCAGACTTTGCTATGAAGTATAATCAAACAGGTCGATTG
CTAGTGGCATACTTTGGAGATGGGTCATTTTCTTGGTGCCCCCCTTCGCAGTTGTTGCCT
TTTGTTGACAACTTTGAAAAAATGTCAAAACAGAGCACTTCCAAGAGTTTCTTATATGCT
GTTGAAAAGACCTTGGATGAAATTAGTGTGCTTGTGGAGTTTCAAATGACCTGCCAATGC
GTCTCTGAAGAGAGTCGTACTGGCCTTTGTTGGCCATTGGCAGTGAATGCTGGAATCAAA
AAGGGTGTTCAAGTGCCTGTTTCAGAAACTGTCAGTCTTTTACTTTCTCAGTTCGAACCT
GCGGAAAGACTTAAAAGTCTAAAACGTAACGCACTAACCAATTCTAATTCCAATATACTT
GAGTTTACTGTCTTGAAGAGTTGGCTATCTGCTTTTTATCGTGCTAAGTATGGACACCTT
TTGGCTTCATATTGTGAACCCCTGCTAGTTGAAGGACTTGAGGACAAGAAGGAAGATCAA
GTCATTGATGCAAATGACTTCAGTATACCCATTGAGGTTCCTATTCAGGGTCCATCAGAA
GAAGAAATTCCTAATTCTGGATCTTCAAAGTTTCCTATGACTGCTTGCGACAAGATTTAT
CAGAAGAGGAAGCAGAAAAGTGTGGCTGAACTTATGGGAGAGAACGCCAAGCCCAAAGGT
AAGAAGACAACTGAAGACGATTCTACACCTTCATCTGTAGAAACATCCGAGAAGAAAAGG
AAGAAGTCTGGTGAGAAAGCTAAAGGTCACACTGGCAGCTCGAAGAGTGTTGATGAAAAA
ATTGGTAAGAGGGTCAGCAAGAAGTCTGGTGACAGTGACTTGGTGAAAACAAAGAAACTT
AGTGTTTCAATTCCTGAGCGTGATGAACTTGGCGACCAGCAAGACATGAATGCGGGCCCT
CTATCGAGGGAAAGAAAGAAGAGCAAGTATTTGTCACCTCCTTATACAAGCCCTAAGTGG
AATGCAGGAAAATCAAGCTTTAAGAGAGACCTGGAAATAGAATCTCAGAAATTTTCTGAT
ATTTCCAAGATTGGTGAGAGGATGACAAAGGCTGCTCGTCTTCTTTTGTCTTCCCCTGAT
GCAAATGGGAATGAGGCTTTCAAGGATGACCTTGACAAAAGTTCTCGTATCAGAAAGCGA
AGCCCTAAGACTTTTGATACCATGGCTATCAATTCATCTGTGGATGAAGTACTGTCCGAG
GTTCAGTCTACTGCTCTAAACCCTCTTTTATTGAGGAATGGATCTCTTGAGAAGGCCAGA
GGTTTCATTTCCACTTTCAGAAACTCAGTATATTTTGATGGATCAAACTACAAGCAGTAT
CACCAAGTGGAAACAGGAAAGAAGAGAAAATCTGTGGGATCAAGAAATGTAATTTCCCAG
AGTGATTCTAAATCACCAGACTCTGTTCCTTCAAAGAAGAGGAAGACAAATCATGCGAAA
TCAGAAGTTACCAAACTCAAAAAAGAATCTGGTCCTTCTAGTCAGGGAAAAGAAGATGAA
GATGATGGTGGAGAAACTTCATCTGTGATTCTCTTGGTGACATTTTTAACTGGTTTTTCT
TTGCCATCAGAGGATGAAATCATTCGAATATATAACAAGTTTGGAGAGCTGAATGAAGAG
GAAACAAAAGTGCTATGTGATTCGAACTCTGTTCGAATTGTCTACAGGCGTGGTTCAGAT
GCTGCACAGGCCTTCAAAGAATCAGTAAGGCAAAGTCCTTTTGGTGCTGCTAATGTGAAC
TTTACGCTCAGCTATTCCTCTAAATCTGAGAGTCCACTATCCTCGCTGAAAGCTCGTAAG
GGGAAGTCACAGGTACAACTAATCAAGCAGAAGCTGAAGGGGATGTCATCAATACTGGGT
AAGTGTAAGGGTAAGATTACAAGCGAGGAGAAATCAGAGTTGGAGAATGAGATAAAAGGT
TTGCTGGAGAAGGTAAGTGCAGTGATTTCAACGAACCCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000954
PEP Infomation

pacid=37427021 transcript=PGSC0003DMT400001285 locus=PGSC0003DMG400000489 ID=PGSC0003DMT400001285.v4.03 annot-version=v4.03
Sequence

MSSDENTEKSKNLAEALDSETLMTDSVPGLLDEVPRVSGDNGNVDTGAISEPVVATEETS
EVGNDADGDVVEVHGSLDNVSGGELASQGAEADQGPGHLVEEMNGEENVAGGSDDEMVDA
VDGETAEDNSGEDTMSVKHVYAVGDFVWGKIKSHPWWPGRVYDASAASDFAMKYNQTGRL
LVAYFGDGSFSWCPPSQLLPFVDNFEKMSKQSTSKSFLYAVEKTLDEISVLVEFQMTCQC
VSEESRTGLCWPLAVNAGIKKGVQVPVSETVSLLLSQFEPAERLKSLKRNALTNSNSNIL
EFTVLKSWLSAFYRAKYGHLLASYCEPLLVEGLEDKKEDQVIDANDFSIPIEVPIQGPSE
EEIPNSGSSKFPMTACDKIYQKRKQKSVAELMGENAKPKGKKTTEDDSTPSSVETSEKKR
KKSGEKAKGHTGSSKSVDEKIGKRVSKKSGDSDLVKTKKLSVSIPERDELGDQQDMNAGP
LSRERKKSKYLSPPYTSPKWNAGKSSFKRDLEIESQKFSDISKIGERMTKAARLLLSSPD
ANGNEAFKDDLDKSSRIRKRSPKTFDTMAINSSVDEVLSEVQSTALNPLLLRNGSLEKAR
GFISTFRNSVYFDGSNYKQYHQVETGKKRKSVGSRNVISQSDSKSPDSVPSKKRKTNHAK
SEVTKLKKESGPSSQGKEDEDDGGETSSVILLVTFLTGFSLPSEDEIIRIYNKFGELNEE
ETKVLCDSNSVRIVYRRGSDAAQAFKESVRQSPFGAANVNFTLSYSSKSESPLSSLKARK
GKSQVQLIKQKLKGMSSILGKCKGKITSEEKSELENEIKGLLEKVSAVISTNP*

Transcript Sequence

Transcript ID

PGSC0003DMT400001285
Transcript Infomation

pacid=37427021 locus=PGSC0003DMG400000489 ID=PGSC0003DMT400001285.v4.03 annot-version=v4.03
Sequence

ATGTCGAGTGACGAAAACACAGAGAAGAGCAAAAATCTAGCTGAAGCATTGGACTCTGAA
ACCCTAATGACTGATTCTGTACCTGGGTTGCTTGATGAGGTGCCTAGGGTTTCTGGTGAT
AATGGAAATGTGGATACTGGTGCTATTAGCGAGCCAGTTGTTGCTACTGAGGAGACCTCG
GAAGTGGGTAATGATGCCGATGGTGATGTGGTGGAAGTTCATGGTTCACTGGATAATGTG
AGTGGGGGAGAGCTTGCTAGTCAAGGGGCTGAAGCAGATCAAGGGCCTGGACATTTGGTT
GAGGAAATGAACGGAGAGGAGAATGTAGCTGGTGGTTCTGATGATGAGATGGTTGATGCT
GTTGATGGAGAAACTGCAGAGGATAACTCTGGGGAAGATACAATGAGTGTAAAACATGTT
TATGCAGTTGGTGACTTTGTGTGGGGCAAGATTAAGAGTCATCCGTGGTGGCCAGGGCGT
GTTTACGATGCTTCCGCTGCCTCAGACTTTGCTATGAAGTATAATCAAACAGGTCGATTG
CTAGTGGCATACTTTGGAGATGGGTCATTTTCTTGGTGCCCCCCTTCGCAGTTGTTGCCT
TTTGTTGACAACTTTGAAAAAATGTCAAAACAGAGCACTTCCAAGAGTTTCTTATATGCT
GTTGAAAAGACCTTGGATGAAATTAGTGTGCTTGTGGAGTTTCAAATGACCTGCCAATGC
GTCTCTGAAGAGAGTCGTACTGGCCTTTGTTGGCCATTGGCAGTGAATGCTGGAATCAAA
AAGGGTGTTCAAGTGCCTGTTTCAGAAACTGTCAGTCTTTTACTTTCTCAGTTCGAACCT
GCGGAAAGACTTAAAAGTCTAAAACGTAACGCACTAACCAATTCTAATTCCAATATACTT
GAGTTTACTGTCTTGAAGAGTTGGCTATCTGCTTTTTATCGTGCTAAGTATGGACACCTT
TTGGCTTCATATTGTGAACCCCTGCTAGTTGAAGGACTTGAGGACAAGAAGGAAGATCAA
GTCATTGATGCAAATGACTTCAGTATACCCATTGAGGTTCCTATTCAGGGTCCATCAGAA
GAAGAAATTCCTAATTCTGGATCTTCAAAGTTTCCTATGACTGCTTGCGACAAGATTTAT
CAGAAGAGGAAGCAGAAAAGTGTGGCTGAACTTATGGGAGAGAACGCCAAGCCCAAAGGT
AAGAAGACAACTGAAGACGATTCTACACCTTCATCTGTAGAAACATCCGAGAAGAAAAGG
AAGAAGTCTGGTGAGAAAGCTAAAGGTCACACTGGCAGCTCGAAGAGTGTTGATGAAAAA
ATTGGTAAGAGGGTCAGCAAGAAGTCTGGTGACAGTGACTTGGTGAAAACAAAGAAACTT
AGTGTTTCAATTCCTGAGCGTGATGAACTTGGCGACCAGCAAGACATGAATGCGGGCCCT
CTATCGAGGGAAAGAAAGAAGAGCAAGTATTTGTCACCTCCTTATACAAGCCCTAAGTGG
AATGCAGGAAAATCAAGCTTTAAGAGAGACCTGGAAATAGAATCTCAGAAATTTTCTGAT
ATTTCCAAGATTGGTGAGAGGATGACAAAGGCTGCTCGTCTTCTTTTGTCTTCCCCTGAT
GCAAATGGGAATGAGGCTTTCAAGGATGACCTTGACAAAAGTTCTCGTATCAGAAAGCGA
AGCCCTAAGACTTTTGATACCATGGCTATCAATTCATCTGTGGATGAAGTACTGTCCGAG
GTTCAGTCTACTGCTCTAAACCCTCTTTTATTGAGGAATGGATCTCTTGAGAAGGCCAGA
GGTTTCATTTCCACTTTCAGAAACTCAGTATATTTTGATGGATCAAACTACAAGCAGTAT
CACCAAGTGGAAACAGGAAAGAAGAGAAAATCTGTGGGATCAAGAAATGTAATTTCCCAG
AGTGATTCTAAATCACCAGACTCTGTTCCTTCAAAGAAGAGGAAGACAAATCATGCGAAA
TCAGAAGTTACCAAACTCAAAAAAGAATCTGGTCCTTCTAGTCAGGGAAAAGAAGATGAA
GATGATGGTGGAGAAACTTCATCTGTGATTCTCTTGGTGACATTTTTAACTGGTTTTTCT
TTGCCATCAGAGGATGAAATCATTCGAATATATAACAAGTTTGGAGAGCTGAATGAAGAG
GAAACAAAAGTGCTATGTGATTCGAACTCTGTTCGAATTGTCTACAGGCGTGGTTCAGAT
GCTGCACAGGCCTTCAAAGAATCAGTAAGGCAAAGTCCTTTTGGTGCTGCTAATGTGAAC
TTTACGCTCAGCTATTCCTCTAAATCTGAGAGTCCACTATCCTCGCTGAAAGCTCGTAAG
GGGAAGTCACAGGTACAACTAATCAAGCAGAAGCTGAAGGGGATGTCATCAATACTGGGT
AAGTGTAAGGGTAAGATTACAAGCGAGGAGAAATCAGAGTTGGAGAATGAGATAAAAGGT
TTGCTGGAGAAGGTAAGTGCAGTGATTTCAACGAACCCATAG