Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001216
CDS Infomation

pacid=37467157 polypeptide=PGSC0003DMP400000902 locus=PGSC0003DMG400000457 ID=PGSC0003DMT400001216.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTTCTCTGTTGGTACTATCTCCACTACCAACTCCTCAAATTCTTTCAATTTCA
TCTTCCTTACATTCTTCTCTACCTTCAATCCCTTTCAAACCCCACAATTTTCTTAGAATT
AGAAGGAAAAAAAATAGGCCAATTTCATCTCCTTTTAGAGTAGCTGCACCCCCAACAACA
ACACCTTTTTCAGCTACTGAAGAAGAAGAGGAAGAACAAAACCCAGATTCAAAATCTAGT
GATATTGAAGATACACAAAATGATGAACAAGATTCGTCCTCGAAATTCTCTTGGAGAGAT
CATTGGTACCCAGTTTCATTAGTTGAAGATCTCGACCCGAGTATACCCACACCATTTCAG
CTACTTAATCGTGATATAGTTATCTGGTTTGATAAATCTGGATCTCAGTGGGTTGCTTTA
GATGACAAATGCCCTCATCGTCTTGCTCCTTTATCTGAAGGGAGATTAGATGAAAATGGG
GATTTGCAGTGTTCATATCATGGATGGTCATTTAATGGATGTGGTTCTTGTACAAGGATA
CCTCAAGCTGCATCTCAAGGACCTGAAGCTAAAGCTTTTCAGTCTCCAAGAGCATGTGCT
ACTAGATTTCCAATTATGGTTTCTCAAGGTTTACTCTTTGTTTGGCCTGATGAAAATGGT
TGGGAGAGAGCTCAGGCAACAAAGCCACCTATGTTGCCTGAAGATTTTGATAAGCCTGAG
TTTGCAACAGTGACAATTCAGCGTGATCTGTTTTATGGCTATGACACTCTCATGGAGAAC
GTCTCTGATCCTTCTCACATTGATTTTGCGCATCACAAGGTTACTGGAAGGCGAGACAGA
GCAAAGCCCTTGCCATTCAAGATGGAGGCATCTGGACCTTGGGGTTTTGCTGGTGCAAAC
AATGATAAACCAAAAATTACTGCAAAATTTGTCGCACCTTGTTACTCAATGAATAAAATA
GAGATCGACACAAAGCTTCCAATTGTGGGTGATCAGAAGTGGGTGATATGGATTTGTTCC
TTTAATGTACCTATGGCACCAGGAAAGACCCGGTCAATTGTTTGTAGTGCTCGAAACTTC
TTCCAATTTACAGTGCCTGGGCCTGCTTGGTGGCAGGTTTTTCCAAGATGGCAAGAACAC
TGGACTTCAAATAAGGTATATGATGGGGATATGATTGTTCTTCAAGGTCAAGAAAAAGTC
TTTCTTTCGAAGTCAAAGGAGAATGGTACTGATGTCAACAAGGAGTATACAAAACTCACA
TTTACACCCACTCAAGCTGATCGATTCGTCTTGGCTTTCCGAAATTGGCTTAGGCGGCAT
GGCAATAGTCAACCTGAATGGTTTGGTAGCACAGACGATCAATCACTGCCATCTACAGTC
TTATCCAAACGCCAGATGATGGACAGATTCGAACAACACACACTCAAATGTTCATCTTGC
AAAAATGCTTACTACACATTCGAGAAGTTGCAGAAGTTACTAATTGGTGCAGTAGTGATA
TGTTGTGCAACTGCAGGCATTCCTGCAGAGTTTAACCTACGTATTATCTTGGGTTCATTA
GCAATTATAAGTGCTGGGCTGGCATACGTTATACACGAATTACAGAAGAATTTCATCTTT
GTTGATTATGTACATGCTGAAATTGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000902
PEP Infomation

pacid=37467157 transcript=PGSC0003DMT400001216 locus=PGSC0003DMG400000457 ID=PGSC0003DMT400001216.v4.03 annot-version=v4.03
Sequence

MVSSLLVLSPLPTPQILSISSSLHSSLPSIPFKPHNFLRIRRKKNRPISSPFRVAAPPTT
TPFSATEEEEEEQNPDSKSSDIEDTQNDEQDSSSKFSWRDHWYPVSLVEDLDPSIPTPFQ
LLNRDIVIWFDKSGSQWVALDDKCPHRLAPLSEGRLDENGDLQCSYHGWSFNGCGSCTRI
PQAASQGPEAKAFQSPRACATRFPIMVSQGLLFVWPDENGWERAQATKPPMLPEDFDKPE
FATVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMEASGPWGFAGAN
NDKPKITAKFVAPCYSMNKIEIDTKLPIVGDQKWVIWICSFNVPMAPGKTRSIVCSARNF
FQFTVPGPAWWQVFPRWQEHWTSNKVYDGDMIVLQGQEKVFLSKSKENGTDVNKEYTKLT
FTPTQADRFVLAFRNWLRRHGNSQPEWFGSTDDQSLPSTVLSKRQMMDRFEQHTLKCSSC
KNAYYTFEKLQKLLIGAVVICCATAGIPAEFNLRIILGSLAIISAGLAYVIHELQKNFIF
VDYVHAEID*

Transcript Sequence

Transcript ID

PGSC0003DMT400001216
Transcript Infomation

pacid=37467157 locus=PGSC0003DMG400000457 ID=PGSC0003DMT400001216.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTTCTCTGTTGGTACTATCTCCACTACCAACTCCTCAAATTCTTTCAATTTCA
TCTTCCTTACATTCTTCTCTACCTTCAATCCCTTTCAAACCCCACAATTTTCTTAGAATT
AGAAGGAAAAAAAATAGGCCAATTTCATCTCCTTTTAGAGTAGCTGCACCCCCAACAACA
ACACCTTTTTCAGCTACTGAAGAAGAAGAGGAAGAACAAAACCCAGATTCAAAATCTAGT
GATATTGAAGATACACAAAATGATGAACAAGATTCGTCCTCGAAATTCTCTTGGAGAGAT
CATTGGTACCCAGTTTCATTAGTTGAAGATCTCGACCCGAGTATACCCACACCATTTCAG
CTACTTAATCGTGATATAGTTATCTGGTTTGATAAATCTGGATCTCAGTGGGTTGCTTTA
GATGACAAATGCCCTCATCGTCTTGCTCCTTTATCTGAAGGGAGATTAGATGAAAATGGG
GATTTGCAGTGTTCATATCATGGATGGTCATTTAATGGATGTGGTTCTTGTACAAGGATA
CCTCAAGCTGCATCTCAAGGACCTGAAGCTAAAGCTTTTCAGTCTCCAAGAGCATGTGCT
ACTAGATTTCCAATTATGGTTTCTCAAGGTTTACTCTTTGTTTGGCCTGATGAAAATGGT
TGGGAGAGAGCTCAGGCAACAAAGCCACCTATGTTGCCTGAAGATTTTGATAAGCCTGAG
TTTGCAACAGTGACAATTCAGCGTGATCTGTTTTATGGCTATGACACTCTCATGGAGAAC
GTCTCTGATCCTTCTCACATTGATTTTGCGCATCACAAGGTTACTGGAAGGCGAGACAGA
GCAAAGCCCTTGCCATTCAAGATGGAGGCATCTGGACCTTGGGGTTTTGCTGGTGCAAAC
AATGATAAACCAAAAATTACTGCAAAATTTGTCGCACCTTGTTACTCAATGAATAAAATA
GAGATCGACACAAAGCTTCCAATTGTGGGTGATCAGAAGTGGGTGATATGGATTTGTTCC
TTTAATGTACCTATGGCACCAGGAAAGACCCGGTCAATTGTTTGTAGTGCTCGAAACTTC
TTCCAATTTACAGTGCCTGGGCCTGCTTGGTGGCAGGTTTTTCCAAGATGGCAAGAACAC
TGGACTTCAAATAAGGTATATGATGGGGATATGATTGTTCTTCAAGGTCAAGAAAAAGTC
TTTCTTTCGAAGTCAAAGGAGAATGGTACTGATGTCAACAAGGAGTATACAAAACTCACA
TTTACACCCACTCAAGCTGATCGATTCGTCTTGGCTTTCCGAAATTGGCTTAGGCGGCAT
GGCAATAGTCAACCTGAATGGTTTGGTAGCACAGACGATCAATCACTGCCATCTACAGTC
TTATCCAAACGCCAGATGATGGACAGATTCGAACAACACACACTCAAATGTTCATCTTGC
AAAAATGCTTACTACACATTCGAGAAGTTGCAGAAGTTACTAATTGGTGCAGTAGTGATA
TGTTGTGCAACTGCAGGCATTCCTGCAGAGTTTAACCTACGTATTATCTTGGGTTCATTA
GCAATTATAAGTGCTGGGCTGGCATACGTTATACACGAATTACAGAAGAATTTCATCTTT
GTTGATTATGTACATGCTGAAATTGACTGA