Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001179
CDS Infomation

pacid=37467501 polypeptide=PGSC0003DMP400000876 locus=PGSC0003DMG400000443 ID=PGSC0003DMT400001179.v4.03 annot-version=v4.03
Sequence

ATGTCATCTTTTAGTGGTTTAGGTATTGGTTTGAGTTTTGTATTTGGTTGTATCCTCATG
GGACTTGTAGCAGAGTTGTATTACTTGTTATGGGTAAGAAAAAGAATCCCAAAGAATGAA
ACAGAGGATCAGTACAACAACAACAACACCCCTTTTGCCACTGAATTTTCTCATCTTTTT
TGTTGGAAGAAGCATAGTTCTGTAAACAATGTTAGCAGCGAACAACGAAGCAACACAGTG
AGAAATCAAGAAATGAATGGTCATGTTCATGATCAAGATCAAGATTTGGAGTTAGGGAAT
AGCAAAGATTTGTTGCTAAAAGGATATGGTGAAGATAGTGTAGAATCAGAGTTAATGAGG
TTACACAATCTTTGTGGACCTCCAAGATTTCTCTTCACAATTAAGGAAGAAACAAAAGAG
GATTTAGAATCTGAAGATGGTAAATCTAGATGTGGTGATAGAAGTAGAACATGTTCAAGA
AACAAAAGCTTTAGTGACCTTATCCTTACACCATTGTCATCACCACCAATTAAGTGTCAA
AATCTTGATTCTTACAATTGTCAAGGATTCAATCCACTCTTTGAATCCTCAAATGAAAAT
GAGTTAAACAAACTCAAATCTTCACCCCCTCCAAAGTTCAAGTTCCTTAGAGACGCCGAG
GAGAAACTTATAAGAAGATTAATAGAATTAGAAGCAGAAAAAAGGGTAATCAAGAATGAA
GTTTGTTCAACAGAGGAAAAAGGGTCATTCATATCTTTTCTTGGAAAGAGCAAAATGAGA
GAGCCTCTTCAACAAATACAAGTACATCAAATGAACTCTACTACTTGTGTAAAGGTACTT
CCATTGGCTTCTTCACCTTCAACCTACAAGCCAATTGATGGAGAGGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000876
PEP Infomation

pacid=37467501 transcript=PGSC0003DMT400001179 locus=PGSC0003DMG400000443 ID=PGSC0003DMT400001179.v4.03 annot-version=v4.03
Sequence

MSSFSGLGIGLSFVFGCILMGLVAELYYLLWVRKRIPKNETEDQYNNNNTPFATEFSHLF
CWKKHSSVNNVSSEQRSNTVRNQEMNGHVHDQDQDLELGNSKDLLLKGYGEDSVESELMR
LHNLCGPPRFLFTIKEETKEDLESEDGKSRCGDRSRTCSRNKSFSDLILTPLSSPPIKCQ
NLDSYNCQGFNPLFESSNENELNKLKSSPPPKFKFLRDAEEKLIRRLIELEAEKRVIKNE
VCSTEEKGSFISFLGKSKMREPLQQIQVHQMNSTTCVKVLPLASSPSTYKPIDGEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400001179
Transcript Infomation

pacid=37467501 locus=PGSC0003DMG400000443 ID=PGSC0003DMT400001179.v4.03 annot-version=v4.03
Sequence

ATGTCATCTTTTAGTGGTTTAGGTATTGGTTTGAGTTTTGTATTTGGTTGTATCCTCATG
GGACTTGTAGCAGAGTTGTATTACTTGTTATGGGTAAGAAAAAGAATCCCAAAGAATGAA
ACAGAGGATCAGTACAACAACAACAACACCCCTTTTGCCACTGAATTTTCTCATCTTTTT
TGTTGGAAGAAGCATAGTTCTGTAAACAATGTTAGCAGCGAACAACGAAGCAACACAGTG
AGAAATCAAGAAATGAATGGTCATGTTCATGATCAAGATCAAGATTTGGAGTTAGGGAAT
AGCAAAGATTTGTTGCTAAAAGGATATGGTGAAGATAGTGTAGAATCAGAGTTAATGAGG
TTACACAATCTTTGTGGACCTCCAAGATTTCTCTTCACAATTAAGGAAGAAACAAAAGAG
GATTTAGAATCTGAAGATGGTAAATCTAGATGTGGTGATAGAAGTAGAACATGTTCAAGA
AACAAAAGCTTTAGTGACCTTATCCTTACACCATTGTCATCACCACCAATTAAGTGTCAA
AATCTTGATTCTTACAATTGTCAAGGATTCAATCCACTCTTTGAATCCTCAAATGAAAAT
GAGTTAAACAAACTCAAATCTTCACCCCCTCCAAAGTTCAAGTTCCTTAGAGACGCCGAG
GAGAAACTTATAAGAAGATTAATAGAATTAGAAGCAGAAAAAAGGGTAATCAAGAATGAA
GTTTGTTCAACAGAGGAAAAAGGGTCATTCATATCTTTTCTTGGAAAGAGCAAAATGAGA
GAGCCTCTTCAACAAATACAAGTACATCAAATGAACTCTACTACTTGTGTAAAGGTACTT
CCATTGGCTTCTTCACCTTCAACCTACAAGCCAATTGATGGAGAGGTTTAA