Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001169
CDS Infomation

pacid=37466599 polypeptide=PGSC0003DMP400000868 locus=PGSC0003DMG400000439 ID=PGSC0003DMT400001169.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGGTGAGGATATTCAGCCACTGGTCTGTGATAATGGAACAGGAATGGTGAAG
GCTGGATTTGCTGGAGACGATGCTCCACGAGCAGTGTTTCCGAGCATTGTTGGTCGGCCA
CGACACACAGGTGTGATGGTTGGTATGGGGCAAAAAGATGCATATGTTGGTGATGAAGCT
CAATCGAAACGTGGTATTCTATCATTGAAATATCCAATTGAGCATGGTATTGTGAGCAAT
TGGGATGACATGGAGAAAATCTGGCATCATACATTTTACAATGAACTTCGTGTTGCTCCA
GAGGAACACCCTGTTCTACTCACCGAAGCACCTCTCAATCCTAAGGCTAATCGTGAGAAG
ATGACTCAAATCATGTTTGAGACATTTAACACTCCTGCTATGTATGTCGCCATTCAAGCT
GTTCTCTCTCTTTATGCTAGTGGTCGTACAACTGGTATTGTCATGGACTCTGGTGATGGT
GTTAGTCACACTGTCCCAATCTATGAGGGATATGCTCTCCCACATGCTATCCTTCGTCTC
AATTTAGCAGGACGTGACCTAACTGATCACCTAATGAAGATCTTGACAGAGCGCGGTTAC
TCATTCACCACCACTGCTGAACGAGAAATCGTCAGGGATGTTAAGGAAAAGCTCTCCTAC
ATTGCTCTTGACTATGAACAAGAGATCATAGACACCACTTCCTCCTCAAAAACTGTTGAG
AAGACCTATGAGTTGCCTGATGGTCAAGTCATCACTATTGGTGCTGAACGTTTCCGATGC
CCTGAAGTGCTTTTCCAACCTTCAATTATCGGAATGGAAGCTGCTGGAATCCATGAAACA
ACCTACAACTCCATCATGAAGTGTGACGTCGATATCAGGAAGGATCTTTATGGAAACATT
GTACTTAGTGGCGGAACCACTATGTTTCCTGGAATTGCTGATAGAATGAGCAAAGAAATC
ACAGCATTGGCTCCAAGTAGCATGAAAATTAAGGTCGTTGCACCACCAGAAAGGAAGTAT
AGTGTTTGGATTGGAGGTTCAATCTTGGCTTCTTTAAGTACCTTCCAACAGATGTGGATT
GCAAAGGCAGAATATGATGAATCTGGTCCATCCATTGTGCATAGAAAATGCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000868
PEP Infomation

pacid=37466599 transcript=PGSC0003DMT400001169 locus=PGSC0003DMG400000439 ID=PGSC0003DMT400001169.v4.03 annot-version=v4.03
Sequence

MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
QSKRGILSLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRL
NLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIIDTTSSSKTVE
KTYELPDGQVITIGAERFRCPEVLFQPSIIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI
VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI
AKAEYDESGPSIVHRKCF*

Transcript Sequence

Transcript ID

PGSC0003DMT400001169
Transcript Infomation

pacid=37466599 locus=PGSC0003DMG400000439 ID=PGSC0003DMT400001169.v4.03 annot-version=v4.03
Sequence

ATGGCAGATGGTGAGGATATTCAGCCACTGGTCTGTGATAATGGAACAGGAATGGTGAAG
GCTGGATTTGCTGGAGACGATGCTCCACGAGCAGTGTTTCCGAGCATTGTTGGTCGGCCA
CGACACACAGGTGTGATGGTTGGTATGGGGCAAAAAGATGCATATGTTGGTGATGAAGCT
CAATCGAAACGTGGTATTCTATCATTGAAATATCCAATTGAGCATGGTATTGTGAGCAAT
TGGGATGACATGGAGAAAATCTGGCATCATACATTTTACAATGAACTTCGTGTTGCTCCA
GAGGAACACCCTGTTCTACTCACCGAAGCACCTCTCAATCCTAAGGCTAATCGTGAGAAG
ATGACTCAAATCATGTTTGAGACATTTAACACTCCTGCTATGTATGTCGCCATTCAAGCT
GTTCTCTCTCTTTATGCTAGTGGTCGTACAACTGGTATTGTCATGGACTCTGGTGATGGT
GTTAGTCACACTGTCCCAATCTATGAGGGATATGCTCTCCCACATGCTATCCTTCGTCTC
AATTTAGCAGGACGTGACCTAACTGATCACCTAATGAAGATCTTGACAGAGCGCGGTTAC
TCATTCACCACCACTGCTGAACGAGAAATCGTCAGGGATGTTAAGGAAAAGCTCTCCTAC
ATTGCTCTTGACTATGAACAAGAGATCATAGACACCACTTCCTCCTCAAAAACTGTTGAG
AAGACCTATGAGTTGCCTGATGGTCAAGTCATCACTATTGGTGCTGAACGTTTCCGATGC
CCTGAAGTGCTTTTCCAACCTTCAATTATCGGAATGGAAGCTGCTGGAATCCATGAAACA
ACCTACAACTCCATCATGAAGTGTGACGTCGATATCAGGAAGGATCTTTATGGAAACATT
GTACTTAGTGGCGGAACCACTATGTTTCCTGGAATTGCTGATAGAATGAGCAAAGAAATC
ACAGCATTGGCTCCAAGTAGCATGAAAATTAAGGTCGTTGCACCACCAGAAAGGAAGTAT
AGTGTTTGGATTGGAGGTTCAATCTTGGCTTCTTTAAGTACCTTCCAACAGATGTGGATT
GCAAAGGCAGAATATGATGAATCTGGTCCATCCATTGTGCATAGAAAATGCTTCTAA