Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001155
CDS Infomation

pacid=37466008 polypeptide=PGSC0003DMP400000860 locus=PGSC0003DMG400000435 ID=PGSC0003DMT400001155.v4.03 annot-version=v4.03
Sequence

ATGGCTCTGTTTCAATCATCACTTTCTCATATATCAATTCTTTCGATTTCTTCAAACAAC
ACTCAAATTCCACAATTCAAATGCTTAAATCTCTCAAAGTTTGTATCTTTACAACAATCA
ATTACGAAAACTGATCGAATTTTCAGAATTACGTGTACTGGACAAGAATCCATCGTTAGA
ACTGTTGACGGAGGTGATGGGGGTAACGGAAAAGGTGGGTTTCCATCTGACAACAACGGT
GGCGGAGATGATGGTGACGGCGGTGGTGGTTTTGATGAAAAAGAGTTTGGACCGATAGTG
AAGTTTGATGAGGTGGTTAAAGAGGCCGAAAAATTAGGGGCGAAATTGCCTATTGATATG
TTGGAAGCTGCTAAGACTACAGGGATTCGGAGATTGATTCTTAGTCGTTACTTGGATATG
CAGGGTTCAGCTTGGCCGCTGGGATTTTTGATGAGACATTGCTCAATGCTGAGAAATCGA
ATGCTTGCTGATCCGTCGTTTTTGTTTAAAGTCGGAACAGAGATTGTCATAGACTCCTGT
TGTGCAACATTTGCAGAGGTTCAGAAAAGGGGAAAGGATTTCTGGGCAGAATTTGAGTTG
TATGCAGCAGATCTTCTTGTTGGAATTGTTGTTGACATCGCATTGGTAGGCATGTTGGCT
CCTTATGTCCGAATAGGCAAGCAGTCCATTTCAAGCAGCTCTTTTGGACGCTTTCGACAT
GCTTGTGGAGCTCTTCCCAGCAGTGTTTTTGAAGCTGAGAGGCCAGGGTGTAAATTTACA
TTGCAGCAGCGTATTTCAACATTCTTTTACAAGGGATTTTTGTATGGCTCAGTTGGATTT
GGGTGTGGCCTCGTTGGTCAGGGCATTGCAAATTTGATAATGACTGCTAAGAGGAGCATC
AAGAAGTCAGAAGAGGACATACCTGTCCCTCCTTTAATAGGAAGTGCTGCACTCTGGGGA
TTCTTTCTGGCAGTCTCTTCGAATACCCGATACCAAATTATAAATGGATTAGAGCGTTTA
GTTGAAGCATCACCTGTAGCCAAACGCGTCCCCCCTGTTGCCATGGCCTTCACTGTGGGT
GTACGATTTGCTAACAATATTTACGGTGGTATGCAGTTTGTGGAATGGGCTAAGCTGAGT
GGGGTGCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400000860
PEP Infomation

pacid=37466008 transcript=PGSC0003DMT400001155 locus=PGSC0003DMG400000435 ID=PGSC0003DMT400001155.v4.03 annot-version=v4.03
Sequence

MALFQSSLSHISILSISSNNTQIPQFKCLNLSKFVSLQQSITKTDRIFRITCTGQESIVR
TVDGGDGGNGKGGFPSDNNGGGDDGDGGGGFDEKEFGPIVKFDEVVKEAEKLGAKLPIDM
LEAAKTTGIRRLILSRYLDMQGSAWPLGFLMRHCSMLRNRMLADPSFLFKVGTEIVIDSC
CATFAEVQKRGKDFWAEFELYAADLLVGIVVDIALVGMLAPYVRIGKQSISSSSFGRFRH
ACGALPSSVFEAERPGCKFTLQQRISTFFYKGFLYGSVGFGCGLVGQGIANLIMTAKRSI
KKSEEDIPVPPLIGSAALWGFFLAVSSNTRYQIINGLERLVEASPVAKRVPPVAMAFTVG
VRFANNIYGGMQFVEWAKLSGVQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400001155
Transcript Infomation

pacid=37466008 locus=PGSC0003DMG400000435 ID=PGSC0003DMT400001155.v4.03 annot-version=v4.03
Sequence

ATGGCTCTGTTTCAATCATCACTTTCTCATATATCAATTCTTTCGATTTCTTCAAACAAC
ACTCAAATTCCACAATTCAAATGCTTAAATCTCTCAAAGTTTGTATCTTTACAACAATCA
ATTACGAAAACTGATCGAATTTTCAGAATTACGTGTACTGGACAAGAATCCATCGTTAGA
ACTGTTGACGGAGGTGATGGGGGTAACGGAAAAGGTGGGTTTCCATCTGACAACAACGGT
GGCGGAGATGATGGTGACGGCGGTGGTGGTTTTGATGAAAAAGAGTTTGGACCGATAGTG
AAGTTTGATGAGGTGGTTAAAGAGGCCGAAAAATTAGGGGCGAAATTGCCTATTGATATG
TTGGAAGCTGCTAAGACTACAGGGATTCGGAGATTGATTCTTAGTCGTTACTTGGATATG
CAGGGTTCAGCTTGGCCGCTGGGATTTTTGATGAGACATTGCTCAATGCTGAGAAATCGA
ATGCTTGCTGATCCGTCGTTTTTGTTTAAAGTCGGAACAGAGATTGTCATAGACTCCTGT
TGTGCAACATTTGCAGAGGTTCAGAAAAGGGGAAAGGATTTCTGGGCAGAATTTGAGTTG
TATGCAGCAGATCTTCTTGTTGGAATTGTTGTTGACATCGCATTGGTAGGCATGTTGGCT
CCTTATGTCCGAATAGGCAAGCAGTCCATTTCAAGCAGCTCTTTTGGACGCTTTCGACAT
GCTTGTGGAGCTCTTCCCAGCAGTGTTTTTGAAGCTGAGAGGCCAGGGTGTAAATTTACA
TTGCAGCAGCGTATTTCAACATTCTTTTACAAGGGATTTTTGTATGGCTCAGTTGGATTT
GGGTGTGGCCTCGTTGGTCAGGGCATTGCAAATTTGATAATGACTGCTAAGAGGAGCATC
AAGAAGTCAGAAGAGGACATACCTGTCCCTCCTTTAATAGGAAGTGCTGCACTCTGGGGA
TTCTTTCTGGCAGTCTCTTCGAATACCCGATACCAAATTATAAATGGATTAGAGCGTTTA
GTTGAAGCATCACCTGTAGCCAAACGCGTCCCCCCTGTTGCCATGGCCTTCACTGTGGGT
GTACGATTTGCTAACAATATTTACGGTGGTATGCAGTTTGTGGAATGGGCTAAGCTGAGT
GGGGTGCAATAA