Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001154
CDS Infomation

pacid=37466775 polypeptide=PGSC0003DMP400000859 locus=PGSC0003DMG400000434 ID=PGSC0003DMT400001154.v4.03 annot-version=v4.03
Sequence

ATGGCACCGGCTGCGAAGGTTACTGGATTCTACCGTGAGGGAAATGACTGGTTTTGCAAT
GCAAGTTTGGTCAGTGATTTTACCTTGGTTGTGGACGGAGTAAACTTCCACCTTCACAAG
TTTCCACTTATGTCGAGATGTGGAAGGATTGACAAAATACTAGGAGCAGCTCAAGGTCCA
CATGAAGGGACTTTCCTGACAACTTTAGAAGACTTCCCTGGTGGGAGTGACATATTTTTA
GTCACAGTTAAGTTCTGCTATGGTATTCGAATAGAATATACCCCAAGGAACATTGTAATG
ATTTATTGTGCAGCAGATTACTTGGAGATGACGGAGGACTATGGTGAAGATAATTTACTG
TTTAAGGCAGATGCTTACTTTCATAAGAATATTCTGAAGAATTGGAAAGATTGCATATTA
ACTCTCCAAAGTTGTGATTCTGTCATACCAAGAGCAGACAAGCTAGAGATCATTAGTAAA
TGCTCGCATGCTCTCTCTGTGATGGTCTGCACAGATCCTAGTTTATTTGGATGGCCTATG
TTGTTGTATGGCTGTTTACAGAGCCCTGGAGGTAGTATATTGTGGAATGGAATTAACACC
GGTGCTAGAATCCAAACCATTGAATCTGACTGGTGGTTCGAAGACATCTCATATCTTTCT
GTGCCATTATTTCAGAGATTAATTCGAACAATGGAAGCCAGAGGTATTAGACATGAAAAT
TTAGCAGGTGCTATGATGTACTACTGTAGGAAGTACCTTCCAGGACTTGGCCGGTGGCAG
AGTGGGCAAATTGGTAAAACTAGAACAGTTGCTAGTTTCAGTATGACACCAGCTGCTGTC
GATCAGAAAGTTCTTCTTGAAAGTGTTGCGAAACAGCTTCCTGAATTGAAGGGCAAATCT
TTTTGCCGTTTCTTGTTGGGACTTCTGCGAGTTGCCTTGATACTTGGTGTGCACCACACA
TGCCTGGACTCGTTGGAGAGGAGAGCAGGAATGCAGTTGGACCTAGCATCCCTAGATGGT
TTGCTGATACCTTCCTACTCAGATTCTGATACATTATATAACACCGACTGTGTTGAACGA
ATGATTCATCATTTTATATCTTCTGAATCTGGGATCACTGCAATACCTGATCCATCTTCA
TTTGAGATAGGAACATCACCATCATCCCATCCTTTAAGGAGAGTGGCGAAGTTGGTTGAC
AGCTATATTGCAGAAGTTGCATCTGATGTGAACCTAAAGCCGGGAAAAGTACGTTCACTT
GCTGAAGCTCTCCCAGAATCTTCAAGATCTCTGCATGATGGGCTATATAGAGCTCTAGAT
ATATACTTCAAGGCGCATCCTTGGCTTTCAGCAAAAGAGAAGGAGCAGCTTTGCAACATC
ATCGACTTTCAGAAGCTCTCTATTGATGCTTGCGCCCATGCATCCCAGAATGACAGATTG
CCTCTTCGAGTTGTTCTCCAAGTTCTTTTCTTCGAGCAATTGCAGCTGAGAACAGCTTTA
GCTGGTTGCTTCCAAGTCTTGGATACAGAAAGTGGCCCTGCAGCTCCTGTCACTGGCCCT
AGTGACATGGCAGGTCAAATTGTACAAAGAGACGGATGGGTGACAGTCGTGCGTGAGAAC
CAGGGTCTAAAGGTGGACTTGGAAAGAATGAAATCTAGGGTTGGTGAACTTGAAGAAGAA
TTCAGCAAAATCAAACAAGAGATGAGAAAGGTCACAAAGTCACATAGTTACCTCAGTTCT
CCGCGCTTTCTTGCCCGAAGGATTGGATGCAAGCTCCTTCCCCAATCCTCAGATACTCAA
CCAGATGTGGTTGAAAGCACAGGTCCAACCCCAAGATCATCAGTTGAGCAACCGAGAAGC
TCAAGACACCATAAAAGCTCCTCTTTGATTTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000859
PEP Infomation

pacid=37466775 transcript=PGSC0003DMT400001154 locus=PGSC0003DMG400000434 ID=PGSC0003DMT400001154.v4.03 annot-version=v4.03
Sequence

MAPAAKVTGFYREGNDWFCNASLVSDFTLVVDGVNFHLHKFPLMSRCGRIDKILGAAQGP
HEGTFLTTLEDFPGGSDIFLVTVKFCYGIRIEYTPRNIVMIYCAADYLEMTEDYGEDNLL
FKADAYFHKNILKNWKDCILTLQSCDSVIPRADKLEIISKCSHALSVMVCTDPSLFGWPM
LLYGCLQSPGGSILWNGINTGARIQTIESDWWFEDISYLSVPLFQRLIRTMEARGIRHEN
LAGAMMYYCRKYLPGLGRWQSGQIGKTRTVASFSMTPAAVDQKVLLESVAKQLPELKGKS
FCRFLLGLLRVALILGVHHTCLDSLERRAGMQLDLASLDGLLIPSYSDSDTLYNTDCVER
MIHHFISSESGITAIPDPSSFEIGTSPSSHPLRRVAKLVDSYIAEVASDVNLKPGKVRSL
AEALPESSRSLHDGLYRALDIYFKAHPWLSAKEKEQLCNIIDFQKLSIDACAHASQNDRL
PLRVVLQVLFFEQLQLRTALAGCFQVLDTESGPAAPVTGPSDMAGQIVQRDGWVTVVREN
QGLKVDLERMKSRVGELEEEFSKIKQEMRKVTKSHSYLSSPRFLARRIGCKLLPQSSDTQ
PDVVESTGPTPRSSVEQPRSSRHHKSSSLIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400001154
Transcript Infomation

pacid=37466775 locus=PGSC0003DMG400000434 ID=PGSC0003DMT400001154.v4.03 annot-version=v4.03
Sequence

ATGGCACCGGCTGCGAAGGTTACTGGATTCTACCGTGAGGGAAATGACTGGTTTTGCAAT
GCAAGTTTGGTCAGTGATTTTACCTTGGTTGTGGACGGAGTAAACTTCCACCTTCACAAG
TTTCCACTTATGTCGAGATGTGGAAGGATTGACAAAATACTAGGAGCAGCTCAAGGTCCA
CATGAAGGGACTTTCCTGACAACTTTAGAAGACTTCCCTGGTGGGAGTGACATATTTTTA
GTCACAGTTAAGTTCTGCTATGGTATTCGAATAGAATATACCCCAAGGAACATTGTAATG
ATTTATTGTGCAGCAGATTACTTGGAGATGACGGAGGACTATGGTGAAGATAATTTACTG
TTTAAGGCAGATGCTTACTTTCATAAGAATATTCTGAAGAATTGGAAAGATTGCATATTA
ACTCTCCAAAGTTGTGATTCTGTCATACCAAGAGCAGACAAGCTAGAGATCATTAGTAAA
TGCTCGCATGCTCTCTCTGTGATGGTCTGCACAGATCCTAGTTTATTTGGATGGCCTATG
TTGTTGTATGGCTGTTTACAGAGCCCTGGAGGTAGTATATTGTGGAATGGAATTAACACC
GGTGCTAGAATCCAAACCATTGAATCTGACTGGTGGTTCGAAGACATCTCATATCTTTCT
GTGCCATTATTTCAGAGATTAATTCGAACAATGGAAGCCAGAGGTATTAGACATGAAAAT
TTAGCAGGTGCTATGATGTACTACTGTAGGAAGTACCTTCCAGGACTTGGCCGGTGGCAG
AGTGGGCAAATTGGTAAAACTAGAACAGTTGCTAGTTTCAGTATGACACCAGCTGCTGTC
GATCAGAAAGTTCTTCTTGAAAGTGTTGCGAAACAGCTTCCTGAATTGAAGGGCAAATCT
TTTTGCCGTTTCTTGTTGGGACTTCTGCGAGTTGCCTTGATACTTGGTGTGCACCACACA
TGCCTGGACTCGTTGGAGAGGAGAGCAGGAATGCAGTTGGACCTAGCATCCCTAGATGGT
TTGCTGATACCTTCCTACTCAGATTCTGATACATTATATAACACCGACTGTGTTGAACGA
ATGATTCATCATTTTATATCTTCTGAATCTGGGATCACTGCAATACCTGATCCATCTTCA
TTTGAGATAGGAACATCACCATCATCCCATCCTTTAAGGAGAGTGGCGAAGTTGGTTGAC
AGCTATATTGCAGAAGTTGCATCTGATGTGAACCTAAAGCCGGGAAAAGTACGTTCACTT
GCTGAAGCTCTCCCAGAATCTTCAAGATCTCTGCATGATGGGCTATATAGAGCTCTAGAT
ATATACTTCAAGGCGCATCCTTGGCTTTCAGCAAAAGAGAAGGAGCAGCTTTGCAACATC
ATCGACTTTCAGAAGCTCTCTATTGATGCTTGCGCCCATGCATCCCAGAATGACAGATTG
CCTCTTCGAGTTGTTCTCCAAGTTCTTTTCTTCGAGCAATTGCAGCTGAGAACAGCTTTA
GCTGGTTGCTTCCAAGTCTTGGATACAGAAAGTGGCCCTGCAGCTCCTGTCACTGGCCCT
AGTGACATGGCAGGTCAAATTGTACAAAGAGACGGATGGGTGACAGTCGTGCGTGAGAAC
CAGGGTCTAAAGGTGGACTTGGAAAGAATGAAATCTAGGGTTGGTGAACTTGAAGAAGAA
TTCAGCAAAATCAAACAAGAGATGAGAAAGGTCACAAAGTCACATAGTTACCTCAGTTCT
CCGCGCTTTCTTGCCCGAAGGATTGGATGCAAGCTCCTTCCCCAATCCTCAGATACTCAA
CCAGATGTGGTTGAAAGCACAGGTCCAACCCCAAGATCATCAGTTGAGCAACCGAGAAGC
TCAAGACACCATAAAAGCTCCTCTTTGATTTCATGA