Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001133
CDS Infomation

pacid=37466908 polypeptide=PGSC0003DMP400000842 locus=PGSC0003DMG400000427 ID=PGSC0003DMT400001133.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGCTTAAGAGATTTAGCTCAGCTGTAACACCTGCAATTCTCAATTCAAGGAAA
AAATTTCAGCGAGAAGAGAAATTAGTTTCTCTAATAGCTTTACAGAATCCATATCGATGG
ACTTCCAATCGCTTTTTCGATATTTACCAGCTAGGAAACAAGGAGGCAATTGAGAAAGAG
CGTGCTCGGCTTAAAGATGAGATGAACCGTGGTTACTTTGCTGACATAAATGAGTTGAAG
GAACATGGTGGTAAGATTGCAACTGCAAATAAGATTATCATTCCAGCAATGGTGGCGGTG
AAGTTTCCTGCTCTGGAAGTGATTCACTCGGATGGTTCAAACCTTAAGCTTCCCATCACA
TCCACTGGAGATGGCGTTGAGGCAAATAAATTAGAAGCATCAAAGGCGTCGTTGATGTGT
GTTTCTTTCCGTGCAAGCTCACAGGCAATGATAGATTCTTGGAGTAAGCCATTTCTGGAT
ACATTCAAAGATTCCAAAAGGGTTCAGCTCTATGAGATCTCCTTGATAGATTCATGGTTT
TTGACACTCAGTCCTGTGAAGAAACTGCTACTTCGGATGATGAGGAAATCTAACCCTCAT
GAAAGCAAGGATGTCTTGCATAGACAGATTGTTTATTCATTTGGAGACCATTACTATTTC
CGGAAAGAGCTTAAAATACTGAATCTCCTGACTGGGTACATGTTCTTGGTTGACAAATTC
GGTAGAATACGATGGCAAGGTTCTGGATTAGCAACAGAAGAAGAGCTGTCATCACTTCTC
TCCTGTACTTCTTTTCTGCTGAATGAGGAATCAAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000842
PEP Infomation

pacid=37466908 transcript=PGSC0003DMT400001133 locus=PGSC0003DMG400000427 ID=PGSC0003DMT400001133.v4.03 annot-version=v4.03
Sequence

MLKLKRFSSAVTPAILNSRKKFQREEKLVSLIALQNPYRWTSNRFFDIYQLGNKEAIEKE
RARLKDEMNRGYFADINELKEHGGKIATANKIIIPAMVAVKFPALEVIHSDGSNLKLPIT
STGDGVEANKLEASKASLMCVSFRASSQAMIDSWSKPFLDTFKDSKRVQLYEISLIDSWF
LTLSPVKKLLLRMMRKSNPHESKDVLHRQIVYSFGDHYYFRKELKILNLLTGYMFLVDKF
GRIRWQGSGLATEEELSSLLSCTSFLLNEESK*

Transcript Sequence

Transcript ID

PGSC0003DMT400001133
Transcript Infomation

pacid=37466908 locus=PGSC0003DMG400000427 ID=PGSC0003DMT400001133.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGCTTAAGAGATTTAGCTCAGCTGTAACACCTGCAATTCTCAATTCAAGGAAA
AAATTTCAGCGAGAAGAGAAATTAGTTTCTCTAATAGCTTTACAGAATCCATATCGATGG
ACTTCCAATCGCTTTTTCGATATTTACCAGCTAGGAAACAAGGAGGCAATTGAGAAAGAG
CGTGCTCGGCTTAAAGATGAGATGAACCGTGGTTACTTTGCTGACATAAATGAGTTGAAG
GAACATGGTGGTAAGATTGCAACTGCAAATAAGATTATCATTCCAGCAATGGTGGCGGTG
AAGTTTCCTGCTCTGGAAGTGATTCACTCGGATGGTTCAAACCTTAAGCTTCCCATCACA
TCCACTGGAGATGGCGTTGAGGCAAATAAATTAGAAGCATCAAAGGCGTCGTTGATGTGT
GTTTCTTTCCGTGCAAGCTCACAGGCAATGATAGATTCTTGGAGTAAGCCATTTCTGGAT
ACATTCAAAGATTCCAAAAGGGTTCAGCTCTATGAGATCTCCTTGATAGATTCATGGTTT
TTGACACTCAGTCCTGTGAAGAAACTGCTACTTCGGATGATGAGGAAATCTAACCCTCAT
GAAAGCAAGGATGTCTTGCATAGACAGATTGTTTATTCATTTGGAGACCATTACTATTTC
CGGAAAGAGCTTAAAATACTGAATCTCCTGACTGGGTACATGTTCTTGGTTGACAAATTC
GGTAGAATACGATGGCAAGGTTCTGGATTAGCAACAGAAGAAGAGCTGTCATCACTTCTC
TCCTGTACTTCTTTTCTGCTGAATGAGGAATCAAAGTAA