Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001087
CDS Infomation

pacid=37464587 polypeptide=PGSC0003DMP400000807 locus=PGSC0003DMG400000412 ID=PGSC0003DMT400001087.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGATGCCAATGGGCAAAAGCCATGAAATTTTGCAATTCACCAATCATGTTATA
CAAGGTAGGTGGTTCTCTCTTTTTGCTTCATTTCTAATCATGGCTGGAGCTGGTGCTACT
TATCTATTTGGTACTTACTCTAAAGAAATAAAATCTTCACTTGGATATGACCAAACAACA
CTTAATCTCTTGGGTTTCTTTAAAGATCTTGGTGCTAATGTTGGTGTTTTCTCTGGTTTA
CTTGCTGAAGTTACTCCAACATGGTTTGTTTTACTAGTTGGTGCATCCATGAATTTCACT
GGCTATTTCATGATATGGTTCTCTGTTGTTGGCAAAATTCAAAAACCAAATGTTTGGCTT
ATGTGTATGTACATATGTCTTGGTGCTAATTCACAGAATTTCGCAAATACTGGTGCTCTT
GTTACATCTGTTAAAAACTTCCCAGAGAGCAGAGGAAATCTGATTGGTTTGTTAAAGGGT
TTTACTGGATTAAGTGGTGCTATAATGACACAATTATACTTAGCTGTATATGGAAATGAT
GCTACATCACTTATTTTGCTTATAGCTTGGTTACCAGCTGCAATATCTCTCATTTTTGTG
TATACCATTCGTGAGATGAGAGTCGTTAAGCAGCCGAATCAGTTGAGAGTTTTCTACTAT
TGTTTGGCTATAGCAATTGTGTTGGCATTGTTTCTTATGGTTGTGACATTGGTTGAGAGG
ACAGTTAGATTTACTCATGGGGCTTATGTTGGTACTGCTACTATAGCTTGTGCTTTGTTG
TTTTTACCTCTTTTGGTTTTCCTTAGAGAAGAGTTAGGTGTTTTTCGTAGAAAGAATGTT
ATCGATCCTCCACGAGTAAGTACCACCGAGCATCCTCCAGTACCAGTAGTAGTAGTAGTG
GAGAATAAAGATACTAACAATTTGAAGTGTTTGTCATTCAATGACATTTTCTTGAATAAA
CCAGAAAGAGGGGAAGATTATAGTATATTGCAAGCACTTTTGAGTACTGATATGTTGATT
TTATTCGTTGCTACGTTCTGTGGACTTGGGACGAGCTTGACTGCTGTCGATAACTTAGGA
CAGATCGGAGAGTCTTTAGGATATCCAACAACAACAATCAAGTCCTTTGTGTCACTTCTT
AGTATATGGAACTTTTTTGGGAGAATTTTCTCAGGATTTGTATCTGAGGCGTTGCTCGTT
AAGTACAAATTCCCAAGGACACTTATGATGACATTAGTCCTGTTGTTATCCTGCATTGGA
CTGCTTCTCATCGCGTTTCCATTCAACGGATCAGTGTACGTTGCATCAGTGATCATCGGG
TTCTCATTTGGTGCACAATTGCCTTTACTCTTCTCAATCATTTCTGAACTTTTCGGATTG
AAGTACTATTCCACATTGTTCAATTGTGGTCAATTGGCTAGCCCTCTTGGTTCATACATA
TTGAATGTGAAGGTAACTGGACCGCTCTACGATAGAGAGGCATTGAAGGATCTCGCGAAA
AAAGGCTTAACTAGATCATCTGTCAAAGAATTGACATGTATTGGGAACCAATGTTATCGA
CAGGCTTTTGTTATCTTGGCTAGTGTCGCGTTTTTTGGGGCGCTAGCCTCGTTGATTTTG
GTTGCAAGAACTAGAAAATTTTATAAAGGTGATATATACAAGAAGTTCAGAGAGCAAGCT
GAGGCAACTGAGGCAGAAATGGCTTCAACAAACAATAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000807
PEP Infomation

pacid=37464587 transcript=PGSC0003DMT400001087 locus=PGSC0003DMG400000412 ID=PGSC0003DMT400001087.v4.03 annot-version=v4.03
Sequence

MGEMPMGKSHEILQFTNHVIQGRWFSLFASFLIMAGAGATYLFGTYSKEIKSSLGYDQTT
LNLLGFFKDLGANVGVFSGLLAEVTPTWFVLLVGASMNFTGYFMIWFSVVGKIQKPNVWL
MCMYICLGANSQNFANTGALVTSVKNFPESRGNLIGLLKGFTGLSGAIMTQLYLAVYGND
ATSLILLIAWLPAAISLIFVYTIREMRVVKQPNQLRVFYYCLAIAIVLALFLMVVTLVER
TVRFTHGAYVGTATIACALLFLPLLVFLREELGVFRRKNVIDPPRVSTTEHPPVPVVVVV
ENKDTNNLKCLSFNDIFLNKPERGEDYSILQALLSTDMLILFVATFCGLGTSLTAVDNLG
QIGESLGYPTTTIKSFVSLLSIWNFFGRIFSGFVSEALLVKYKFPRTLMMTLVLLLSCIG
LLLIAFPFNGSVYVASVIIGFSFGAQLPLLFSIISELFGLKYYSTLFNCGQLASPLGSYI
LNVKVTGPLYDREALKDLAKKGLTRSSVKELTCIGNQCYRQAFVILASVAFFGALASLIL
VARTRKFYKGDIYKKFREQAEATEAEMASTNNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400001087
Transcript Infomation

pacid=37464587 locus=PGSC0003DMG400000412 ID=PGSC0003DMT400001087.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGATGCCAATGGGCAAAAGCCATGAAATTTTGCAATTCACCAATCATGTTATA
CAAGGTAGGTGGTTCTCTCTTTTTGCTTCATTTCTAATCATGGCTGGAGCTGGTGCTACT
TATCTATTTGGTACTTACTCTAAAGAAATAAAATCTTCACTTGGATATGACCAAACAACA
CTTAATCTCTTGGGTTTCTTTAAAGATCTTGGTGCTAATGTTGGTGTTTTCTCTGGTTTA
CTTGCTGAAGTTACTCCAACATGGTTTGTTTTACTAGTTGGTGCATCCATGAATTTCACT
GGCTATTTCATGATATGGTTCTCTGTTGTTGGCAAAATTCAAAAACCAAATGTTTGGCTT
ATGTGTATGTACATATGTCTTGGTGCTAATTCACAGAATTTCGCAAATACTGGTGCTCTT
GTTACATCTGTTAAAAACTTCCCAGAGAGCAGAGGAAATCTGATTGGTTTGTTAAAGGGT
TTTACTGGATTAAGTGGTGCTATAATGACACAATTATACTTAGCTGTATATGGAAATGAT
GCTACATCACTTATTTTGCTTATAGCTTGGTTACCAGCTGCAATATCTCTCATTTTTGTG
TATACCATTCGTGAGATGAGAGTCGTTAAGCAGCCGAATCAGTTGAGAGTTTTCTACTAT
TGTTTGGCTATAGCAATTGTGTTGGCATTGTTTCTTATGGTTGTGACATTGGTTGAGAGG
ACAGTTAGATTTACTCATGGGGCTTATGTTGGTACTGCTACTATAGCTTGTGCTTTGTTG
TTTTTACCTCTTTTGGTTTTCCTTAGAGAAGAGTTAGGTGTTTTTCGTAGAAAGAATGTT
ATCGATCCTCCACGAGTAAGTACCACCGAGCATCCTCCAGTACCAGTAGTAGTAGTAGTG
GAGAATAAAGATACTAACAATTTGAAGTGTTTGTCATTCAATGACATTTTCTTGAATAAA
CCAGAAAGAGGGGAAGATTATAGTATATTGCAAGCACTTTTGAGTACTGATATGTTGATT
TTATTCGTTGCTACGTTCTGTGGACTTGGGACGAGCTTGACTGCTGTCGATAACTTAGGA
CAGATCGGAGAGTCTTTAGGATATCCAACAACAACAATCAAGTCCTTTGTGTCACTTCTT
AGTATATGGAACTTTTTTGGGAGAATTTTCTCAGGATTTGTATCTGAGGCGTTGCTCGTT
AAGTACAAATTCCCAAGGACACTTATGATGACATTAGTCCTGTTGTTATCCTGCATTGGA
CTGCTTCTCATCGCGTTTCCATTCAACGGATCAGTGTACGTTGCATCAGTGATCATCGGG
TTCTCATTTGGTGCACAATTGCCTTTACTCTTCTCAATCATTTCTGAACTTTTCGGATTG
AAGTACTATTCCACATTGTTCAATTGTGGTCAATTGGCTAGCCCTCTTGGTTCATACATA
TTGAATGTGAAGGTAACTGGACCGCTCTACGATAGAGAGGCATTGAAGGATCTCGCGAAA
AAAGGCTTAACTAGATCATCTGTCAAAGAATTGACATGTATTGGGAACCAATGTTATCGA
CAGGCTTTTGTTATCTTGGCTAGTGTCGCGTTTTTTGGGGCGCTAGCCTCGTTGATTTTG
GTTGCAAGAACTAGAAAATTTTATAAAGGTGATATATACAAGAAGTTCAGAGAGCAAGCT
GAGGCAACTGAGGCAGAAATGGCTTCAACAAACAATAAATAG