Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001081
CDS Infomation

pacid=37464300 polypeptide=PGSC0003DMP400000801 locus=PGSC0003DMG401000410 ID=PGSC0003DMT400001081.v4.03 annot-version=v4.03
Sequence

ATGCCAATTCTAGCAATGTCACTACCAAAACCCAATCTTTTCTCTAATCTTCCCACTACC
CCACCCCCTACCCACAACCCCAACTCAACCCCACCACTCCAACCACCCATCCCCATCCCC
AAATACCCAAAGAAACAAAACCCCAATTCCTCAAAACCGCAAAAAAACTCGGTTCCAGCT
TTCAAAACCCACCATCACAACTCCAAATACCACAAACCGGTTAAACCGGGTCAAGTCATC
ACCGAAGACGGCGACCGTTCGGTCGTCGTGAAAGATTCCGGCGTTTCATATCGTCTCCCT
GGTGCCCCTTTTGATTTCCAGTTCAGTTACTCTGAAACTCCGAAAGCTAAACCGTTGGCT
ATTCGTGAACCGGCTTTTTTGCCTTTTGCTCCTCCGACTATGCCTAGACCGTGGACAGGG
AAAGCACCCATGAAGAAATCTAAGAGAAATATTAAGCTTTTTGAGCCATTGTATCCTCAA
ATGGAGAGTGATGATGATGGGGGTAAGCGTTATGAAATGTTGAGGGCATATGAGCTGGGG
ATGTTTGAAGGAAAGCCAAAGAAGGTGTTGGGTCCCCCATTGACAAAGATGGAAATTCAA
GAGCTTTTGAAAGATTGTATAGCTAGTAATCGACAAGTTAACATTGGTCGGGATGGATTG
GTACATAACATGTTAGAGTTAATACATACTCACTGGAGGAGGAATCCTGTTTGTAAAGTT
CGATGCTTAGGAGTCCCTACTGTTGATATGAACAACCTATGCCAATGTCTCGAGGAGAAG
ACTGGCGGAAAGATCATACATAGAGTGGGTGGTGTAGTTTATCTCTTTCGGGGAAGGAAC
TATGACCAGCGTACACGTCCAAAGTACCCACTGATGTTATGGAAACCAGCTACACCAGTT
TACCCGAAACTTATACAGGAAGCACCAGAAGGATTGACCAAAGAAGAGGCTGATGAATTA
CGAATCAAGGGAAAGAAGCTACCCCCTATCTGTAAATTGGCGAAAAATGGAGTTTACCTT
ACGCTAGTGAGAGACGTGAGAAGTGCCTTTGAAGCTTGTCCACTGGTGAAGATTGATTGC
CGGGGTATGCATGCAAGTGATTATAAGAAGCTAGGAGCTAAGTTAAAGGAATTGGTCCCT
TGTGTGCTATTGTCATTCGATGATGAACAGATATTGATGTGGAGAGGAAAAGACTGGAAA
CCTATGTACGGAAATGCCCCGCCGGTTGTGTCCTCCAGAATTGATGCTGTTGCAGATGAA
ATAAATACTTCAGGCCGCTCAGGCACTGCCAAAGATTATTCCAACGCACACTCTAGAACA
CGGAGCACAAGCCCTAAAATGAAGTCCCTGTGGAAGAATGCTATTGATTCAGGCAAGGCA
TTATTGCTAGACGACATTGATCTAAAACCTGATGATCTCTTGAACAAGGTGGAGGAATTC
GCTAGCATTTCCCAGGCCATAGAGCACACATATCCCGCTCTGGTTTTATCCAACAAACGT
TCCCCTGAACAGCCAGGACTGATGTGGAGAGGCAGTTCCGATGATGACAATGACAGCGAC
GATGAGATCAGTGATGATGATGATCATGAAGATAAATATTACATTAACAACTCATTTGAA
GCATTAGAGTCGACAGTTCCTGAAGGATTATTACCAGTTGACTTAATAGTAAAGGAGTTC
AGTGATGATGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000801
PEP Infomation

pacid=37464300 transcript=PGSC0003DMT400001081 locus=PGSC0003DMG401000410 ID=PGSC0003DMT400001081.v4.03 annot-version=v4.03
Sequence

MPILAMSLPKPNLFSNLPTTPPPTHNPNSTPPLQPPIPIPKYPKKQNPNSSKPQKNSVPA
FKTHHHNSKYHKPVKPGQVITEDGDRSVVVKDSGVSYRLPGAPFDFQFSYSETPKAKPLA
IREPAFLPFAPPTMPRPWTGKAPMKKSKRNIKLFEPLYPQMESDDDGGKRYEMLRAYELG
MFEGKPKKVLGPPLTKMEIQELLKDCIASNRQVNIGRDGLVHNMLELIHTHWRRNPVCKV
RCLGVPTVDMNNLCQCLEEKTGGKIIHRVGGVVYLFRGRNYDQRTRPKYPLMLWKPATPV
YPKLIQEAPEGLTKEEADELRIKGKKLPPICKLAKNGVYLTLVRDVRSAFEACPLVKIDC
RGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKPMYGNAPPVVSSRIDAVADE
INTSGRSGTAKDYSNAHSRTRSTSPKMKSLWKNAIDSGKALLLDDIDLKPDDLLNKVEEF
ASISQAIEHTYPALVLSNKRSPEQPGLMWRGSSDDDNDSDDEISDDDDHEDKYYINNSFE
ALESTVPEGLLPVDLIVKEFSDDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400001081
Transcript Infomation

pacid=37464300 locus=PGSC0003DMG401000410 ID=PGSC0003DMT400001081.v4.03 annot-version=v4.03
Sequence

ATGCCAATTCTAGCAATGTCACTACCAAAACCCAATCTTTTCTCTAATCTTCCCACTACC
CCACCCCCTACCCACAACCCCAACTCAACCCCACCACTCCAACCACCCATCCCCATCCCC
AAATACCCAAAGAAACAAAACCCCAATTCCTCAAAACCGCAAAAAAACTCGGTTCCAGCT
TTCAAAACCCACCATCACAACTCCAAATACCACAAACCGGTTAAACCGGGTCAAGTCATC
ACCGAAGACGGCGACCGTTCGGTCGTCGTGAAAGATTCCGGCGTTTCATATCGTCTCCCT
GGTGCCCCTTTTGATTTCCAGTTCAGTTACTCTGAAACTCCGAAAGCTAAACCGTTGGCT
ATTCGTGAACCGGCTTTTTTGCCTTTTGCTCCTCCGACTATGCCTAGACCGTGGACAGGG
AAAGCACCCATGAAGAAATCTAAGAGAAATATTAAGCTTTTTGAGCCATTGTATCCTCAA
ATGGAGAGTGATGATGATGGGGGTAAGCGTTATGAAATGTTGAGGGCATATGAGCTGGGG
ATGTTTGAAGGAAAGCCAAAGAAGGTGTTGGGTCCCCCATTGACAAAGATGGAAATTCAA
GAGCTTTTGAAAGATTGTATAGCTAGTAATCGACAAGTTAACATTGGTCGGGATGGATTG
GTACATAACATGTTAGAGTTAATACATACTCACTGGAGGAGGAATCCTGTTTGTAAAGTT
CGATGCTTAGGAGTCCCTACTGTTGATATGAACAACCTATGCCAATGTCTCGAGGAGAAG
ACTGGCGGAAAGATCATACATAGAGTGGGTGGTGTAGTTTATCTCTTTCGGGGAAGGAAC
TATGACCAGCGTACACGTCCAAAGTACCCACTGATGTTATGGAAACCAGCTACACCAGTT
TACCCGAAACTTATACAGGAAGCACCAGAAGGATTGACCAAAGAAGAGGCTGATGAATTA
CGAATCAAGGGAAAGAAGCTACCCCCTATCTGTAAATTGGCGAAAAATGGAGTTTACCTT
ACGCTAGTGAGAGACGTGAGAAGTGCCTTTGAAGCTTGTCCACTGGTGAAGATTGATTGC
CGGGGTATGCATGCAAGTGATTATAAGAAGCTAGGAGCTAAGTTAAAGGAATTGGTCCCT
TGTGTGCTATTGTCATTCGATGATGAACAGATATTGATGTGGAGAGGAAAAGACTGGAAA
CCTATGTACGGAAATGCCCCGCCGGTTGTGTCCTCCAGAATTGATGCTGTTGCAGATGAA
ATAAATACTTCAGGCCGCTCAGGCACTGCCAAAGATTATTCCAACGCACACTCTAGAACA
CGGAGCACAAGCCCTAAAATGAAGTCCCTGTGGAAGAATGCTATTGATTCAGGCAAGGCA
TTATTGCTAGACGACATTGATCTAAAACCTGATGATCTCTTGAACAAGGTGGAGGAATTC
GCTAGCATTTCCCAGGCCATAGAGCACACATATCCCGCTCTGGTTTTATCCAACAAACGT
TCCCCTGAACAGCCAGGACTGATGTGGAGAGGCAGTTCCGATGATGACAATGACAGCGAC
GATGAGATCAGTGATGATGATGATCATGAAGATAAATATTACATTAACAACTCATTTGAA
GCATTAGAGTCGACAGTTCCTGAAGGATTATTACCAGTTGACTTAATAGTAAAGGAGTTC
AGTGATGATGAGTAA