Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001060
CDS Infomation

pacid=37467574 polypeptide=PGSC0003DMP400000785 locus=PGSC0003DMG400000399 ID=PGSC0003DMT400001060.v4.03 annot-version=v4.03
Sequence

ATGGGGGAAGATTTGATGACAAGTTTGTCAATTGATAATTATCAACTATCTACATTCTTG
TCTATGGACTCAATTGCAATTGCTGCTGCTACCTCTAATGAGGATTCAGACAGGGATATG
AATAGGGAGATTGTGATTTCGAGGCCACCGGATATTAATCTCCCGTTATATATGGAACGT
AGCCCTACTCCTCGTCCTCCACCACCACCTCTATCTTGGAATCACGACTTGTTTGATATG
ATGGAGGTTGGACTTGGAAACCAGATTAATGAATGTTTTGAGCTTCTTGATTTGCCTAAA
GTTGGAAGGAAATGTGATAAGAGATTGGATAGTGTTTGGGGTGCTTGGTTTTTCTTTACT
TTTTACTTTAAGCCTGTTTTGAAGGAGAAATCTAAGTGCAAAGTTGTTCGAGATAGTAAT
GGGGTGTCGGGATTTGATAAGTCTGATCTCCAGCTTGATGTGTTTTTGGCTCAGCATGAT
ATGGAGAATATGTACATGTGGGTTTTCAAGGAGAGGTCTGAAAATGCGTTGGGGGAGATG
CAGTTGAGGAGTTATATGAATGGACATTCGAAGCAGGGCGAGCATTCATTTCCATTTAGT
GTTGACAAGGGGTTCATCTGTTCTCATAAAATGCAGCATAAGCATTATAGAGGCCTCTCC
AATCCGGTGTGTTTGCATGGAATTGAGCTTGTTCCATCACCCAATTTATTGTGTATTGAT
GAGGAAGAGCAGAAGAAGTGGATGGAACTTACTGGTAGGGATCTCAAATTTTCAGTACCA
CCCGAAGCTAGAGACTTCAGTTCATGGCGGAACCTTCCCAACACAGATTTTGAGCTTCAA
AGATCGATCCCTTTGCCAAAGAGCAATTCTCATCTTCCTTCGAAAAAATTGCTTAATGGT
TCTAGTCTTAACTTGTCAACTCGACCATCAAACCATGTGAACAGCAATGGTTTAGAGCTC
TCATCTGATTTTGGTAAGAAAAGGAAAGACTTCTTTTCTCATGGAAGTGATGAAGATTGT
TTCTTGTCGACTAATCCCAGTTTAAACAGACATCAAGATGGACAACCACACACTATTGCA
CCACCTTGGATGAATGAGTTTTCGGGGGTAATGAAGAATGTGTATGGGCCAGCCATTGCT
GCAAAAGTTATATACGAGGACTCGGAAGGATACGTGATTATGATCACTCTACCTTTTGTT
GATCGTGAAAAGGTGAAAGTTCATTGGTGGAACAATACTAATCATGCCATCATAAGAATA
ACATTTGTGAGCACGGCATCCCCCCCATTCATGGTGAGAAATGGTAGAACATTCAAGCTA
ACTGACCCATCTCCAGAGCACTGTCCTTGCGGTGAATTCACAAGGGAAATCTCACTTCCA
ACTCGAATACCTGATGATGCGAAGCTAGAAGCATATTTTGACATAAATGGAGCTGTACTT
GAATTGAAAGTTCCCAAATATGGCACAACTCCAGAAGTGCATGAAGTTCCTGTTTGTCTT
CGACCTCCAAATGAGTTTATGTTGTCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000785
PEP Infomation

pacid=37467574 transcript=PGSC0003DMT400001060 locus=PGSC0003DMG400000399 ID=PGSC0003DMT400001060.v4.03 annot-version=v4.03
Sequence

MGEDLMTSLSIDNYQLSTFLSMDSIAIAAATSNEDSDRDMNREIVISRPPDINLPLYMER
SPTPRPPPPPLSWNHDLFDMMEVGLGNQINECFELLDLPKVGRKCDKRLDSVWGAWFFFT
FYFKPVLKEKSKCKVVRDSNGVSGFDKSDLQLDVFLAQHDMENMYMWVFKERSENALGEM
QLRSYMNGHSKQGEHSFPFSVDKGFICSHKMQHKHYRGLSNPVCLHGIELVPSPNLLCID
EEEQKKWMELTGRDLKFSVPPEARDFSSWRNLPNTDFELQRSIPLPKSNSHLPSKKLLNG
SSLNLSTRPSNHVNSNGLELSSDFGKKRKDFFSHGSDEDCFLSTNPSLNRHQDGQPHTIA
PPWMNEFSGVMKNVYGPAIAAKVIYEDSEGYVIMITLPFVDREKVKVHWWNNTNHAIIRI
TFVSTASPPFMVRNGRTFKLTDPSPEHCPCGEFTREISLPTRIPDDAKLEAYFDINGAVL
ELKVPKYGTTPEVHEVPVCLRPPNEFMLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400001060
Transcript Infomation

pacid=37467574 locus=PGSC0003DMG400000399 ID=PGSC0003DMT400001060.v4.03 annot-version=v4.03
Sequence

ATGGGGGAAGATTTGATGACAAGTTTGTCAATTGATAATTATCAACTATCTACATTCTTG
TCTATGGACTCAATTGCAATTGCTGCTGCTACCTCTAATGAGGATTCAGACAGGGATATG
AATAGGGAGATTGTGATTTCGAGGCCACCGGATATTAATCTCCCGTTATATATGGAACGT
AGCCCTACTCCTCGTCCTCCACCACCACCTCTATCTTGGAATCACGACTTGTTTGATATG
ATGGAGGTTGGACTTGGAAACCAGATTAATGAATGTTTTGAGCTTCTTGATTTGCCTAAA
GTTGGAAGGAAATGTGATAAGAGATTGGATAGTGTTTGGGGTGCTTGGTTTTTCTTTACT
TTTTACTTTAAGCCTGTTTTGAAGGAGAAATCTAAGTGCAAAGTTGTTCGAGATAGTAAT
GGGGTGTCGGGATTTGATAAGTCTGATCTCCAGCTTGATGTGTTTTTGGCTCAGCATGAT
ATGGAGAATATGTACATGTGGGTTTTCAAGGAGAGGTCTGAAAATGCGTTGGGGGAGATG
CAGTTGAGGAGTTATATGAATGGACATTCGAAGCAGGGCGAGCATTCATTTCCATTTAGT
GTTGACAAGGGGTTCATCTGTTCTCATAAAATGCAGCATAAGCATTATAGAGGCCTCTCC
AATCCGGTGTGTTTGCATGGAATTGAGCTTGTTCCATCACCCAATTTATTGTGTATTGAT
GAGGAAGAGCAGAAGAAGTGGATGGAACTTACTGGTAGGGATCTCAAATTTTCAGTACCA
CCCGAAGCTAGAGACTTCAGTTCATGGCGGAACCTTCCCAACACAGATTTTGAGCTTCAA
AGATCGATCCCTTTGCCAAAGAGCAATTCTCATCTTCCTTCGAAAAAATTGCTTAATGGT
TCTAGTCTTAACTTGTCAACTCGACCATCAAACCATGTGAACAGCAATGGTTTAGAGCTC
TCATCTGATTTTGGTAAGAAAAGGAAAGACTTCTTTTCTCATGGAAGTGATGAAGATTGT
TTCTTGTCGACTAATCCCAGTTTAAACAGACATCAAGATGGACAACCACACACTATTGCA
CCACCTTGGATGAATGAGTTTTCGGGGGTAATGAAGAATGTGTATGGGCCAGCCATTGCT
GCAAAAGTTATATACGAGGACTCGGAAGGATACGTGATTATGATCACTCTACCTTTTGTT
GATCGTGAAAAGGTGAAAGTTCATTGGTGGAACAATACTAATCATGCCATCATAAGAATA
ACATTTGTGAGCACGGCATCCCCCCCATTCATGGTGAGAAATGGTAGAACATTCAAGCTA
ACTGACCCATCTCCAGAGCACTGTCCTTGCGGTGAATTCACAAGGGAAATCTCACTTCCA
ACTCGAATACCTGATGATGCGAAGCTAGAAGCATATTTTGACATAAATGGAGCTGTACTT
GAATTGAAAGTTCCCAAATATGGCACAACTCCAGAAGTGCATGAAGTTCCTGTTTGTCTT
CGACCTCCAAATGAGTTTATGTTGTCGTGA