Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001049
CDS Infomation

pacid=37466659 polypeptide=PGSC0003DMP400000776 locus=PGSC0003DMG400000396 ID=PGSC0003DMT400001049.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGAAGATAAAGGAGAAGTAGCTAAAAAGTTGATTGAAATAGTTAATGATATA
TCAAACATATCGGATTATAAAATTTCGGTGAAGAAACAGTTCTGTAATTTAGCTAGAAGG
CTCAAGTTGTTGACTCCAATGTTCGAAGAGATTCGTGATAACAAAGAGAAATTACCAGTT
GAATCTATGAAATCGTTGATTTCATTAAAAGAAACTCTTGAATCTGCTAAGGAATTGCTC
AAATTTGGTAGCGAAGGCAGCAAGATTTATCTGGTGCTAGAAATGGAGCATATCATGAAT
AAATTTCAAGAGCTGACATCCCAGCTTGAACAAGCTTTGAATGGAATTTATTATGAAAAG
CTTGAAATATCCGACGAAGTTAAAGAACAGGTTGCACTTGTCCTTTCTCAGTTCCAAAGA
GCCAAAGGAAGGGTTGAAACACCTGATGCTGAACTGCATGAAGATTTGCTGTCTCTTTAT
AGCAGGAGTAATGACGCCGCTGTAGATCAAGATGTCCTAAGGAGGTTAGTTGATAAGCTA
CAGCTGACCGAGTTAGATGACCTTAAACAAGAATCACTAGCTTTGCATGAAATGGTCATT
GCTACTGATGGAGATCCCGAGGAGAGAATAGAGAAGATGTCAATGCTACTGAAGAAAATC
AAGGACTTTGTACAGACTGAGAATCCAAACATTGATGCTTATGGAAGAGATAAGTCTTCA
AATTTTAGTGGACAAGTATCTGCAGACGGAAGCCAGAAGGCCCCAGTTATACCGGATGAT
TTTCGTTGCCCTATTTCCTTGGAGTTGATGACAGATCCCGTCATTGTTTCAACTGGACAG
ACCTATGAACGATCTTGTATTGAGAAGTGGCTGGAAGCTGGACATAGCACTTGTCCCAAG
ACTCAACAAGCCCTCACAAGCAAATCTCTGACACCCAACTATGTATTGCGTAGCCTTATA
GCACAGTGGTGTGAAGCGAATGGGATTGAACCACCTAAAAGACCAGGCAGTTCTCCACCC
AAAAAGTCTGCATCTGCATGCACTCCTGCTGAACACTCGATGATAGAGAATCTCCTGAGA
AAGCTCAAATCTGGTAGCCCCGAAGAGGCGCGTTCTGCTGCAGGTGAAATCCGCCTTCTT
GCTAAGCGTAATACTGATAACCGTGTTGCAATAGCTGAAGCTGGTGCCATTCCTCTGCTA
GTCCATCTTCTATCCACACCTGATTCTCGAACTCAAGAGCATGCTGTTACAGCACTTCTC
AACCTTTCCATATGTGAGAATAATAAAGGACACATCGTAACTTCAAGGGCAGTGCCTGGT
ATTGTTCATGTACTCAGGAAGGGGAGCATGGAAGCACGTGAAAATGCAGCAGCCACCCTT
TTCAGCCTTTCAGTTATCGATGAAAATAAGGTCACCATTGGTTCTTCAGGAGCGATTCCT
CCGCTTGTGGCGTTACTAAGTGAAGGTACACAAAGGGGAAAGAAAGACGCGGCTACAGCA
CTTTTCAATCTATGCATTTATCAAGGGAACAAGGGCAGGGCAATAAGGGCTGGAGTTGTA
CCTACATTGATGCAGCTGCTCACAAAACCTCAAGGTGGTATGGTTGATGAAGCACTTGCT
ATATTAGCAATCTTGTCAAGTCATCCAGAAGGGAAGGCAGCTATCGGAGCTGCAGACGCG
GTTCCTGTTTTGGTAGACGTGATCTCAAATGGTTCTCCCAGAAACAAAGAAAATGCTGCT
GCAGTTTTAGTACACCTCTGCTCTGGGGACCAACATCATCTGGTCGAAGCACAGCGACTT
GGTTTGATAGGTCCTTTGACGGATTTAGTACAAAATGGAACCGAAAGAGGCAGACGAAAA
GCAACCCAACTGCTTGAAAGAATGAACAGACTTGCCGAGCAGACAAAACAGCCCCAGGCG
CAGGCCGAGTCTCAAACTCAAAACCAGGTCTCGCGGTCACCACCGGCCTCATCAACTAAT
GCCATTGAGAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000776
PEP Infomation

pacid=37466659 transcript=PGSC0003DMT400001049 locus=PGSC0003DMG400000396 ID=PGSC0003DMT400001049.v4.03 annot-version=v4.03
Sequence

MGEEDKGEVAKKLIEIVNDISNISDYKISVKKQFCNLARRLKLLTPMFEEIRDNKEKLPV
ESMKSLISLKETLESAKELLKFGSEGSKIYLVLEMEHIMNKFQELTSQLEQALNGIYYEK
LEISDEVKEQVALVLSQFQRAKGRVETPDAELHEDLLSLYSRSNDAAVDQDVLRRLVDKL
QLTELDDLKQESLALHEMVIATDGDPEERIEKMSMLLKKIKDFVQTENPNIDAYGRDKSS
NFSGQVSADGSQKAPVIPDDFRCPISLELMTDPVIVSTGQTYERSCIEKWLEAGHSTCPK
TQQALTSKSLTPNYVLRSLIAQWCEANGIEPPKRPGSSPPKKSASACTPAEHSMIENLLR
KLKSGSPEEARSAAGEIRLLAKRNTDNRVAIAEAGAIPLLVHLLSTPDSRTQEHAVTALL
NLSICENNKGHIVTSRAVPGIVHVLRKGSMEARENAAATLFSLSVIDENKVTIGSSGAIP
PLVALLSEGTQRGKKDAATALFNLCIYQGNKGRAIRAGVVPTLMQLLTKPQGGMVDEALA
ILAILSSHPEGKAAIGAADAVPVLVDVISNGSPRNKENAAAVLVHLCSGDQHHLVEAQRL
GLIGPLTDLVQNGTERGRRKATQLLERMNRLAEQTKQPQAQAESQTQNQVSRSPPASSTN
AIES*

Transcript Sequence

Transcript ID

PGSC0003DMT400001049
Transcript Infomation

pacid=37466659 locus=PGSC0003DMG400000396 ID=PGSC0003DMT400001049.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGAAGATAAAGGAGAAGTAGCTAAAAAGTTGATTGAAATAGTTAATGATATA
TCAAACATATCGGATTATAAAATTTCGGTGAAGAAACAGTTCTGTAATTTAGCTAGAAGG
CTCAAGTTGTTGACTCCAATGTTCGAAGAGATTCGTGATAACAAAGAGAAATTACCAGTT
GAATCTATGAAATCGTTGATTTCATTAAAAGAAACTCTTGAATCTGCTAAGGAATTGCTC
AAATTTGGTAGCGAAGGCAGCAAGATTTATCTGGTGCTAGAAATGGAGCATATCATGAAT
AAATTTCAAGAGCTGACATCCCAGCTTGAACAAGCTTTGAATGGAATTTATTATGAAAAG
CTTGAAATATCCGACGAAGTTAAAGAACAGGTTGCACTTGTCCTTTCTCAGTTCCAAAGA
GCCAAAGGAAGGGTTGAAACACCTGATGCTGAACTGCATGAAGATTTGCTGTCTCTTTAT
AGCAGGAGTAATGACGCCGCTGTAGATCAAGATGTCCTAAGGAGGTTAGTTGATAAGCTA
CAGCTGACCGAGTTAGATGACCTTAAACAAGAATCACTAGCTTTGCATGAAATGGTCATT
GCTACTGATGGAGATCCCGAGGAGAGAATAGAGAAGATGTCAATGCTACTGAAGAAAATC
AAGGACTTTGTACAGACTGAGAATCCAAACATTGATGCTTATGGAAGAGATAAGTCTTCA
AATTTTAGTGGACAAGTATCTGCAGACGGAAGCCAGAAGGCCCCAGTTATACCGGATGAT
TTTCGTTGCCCTATTTCCTTGGAGTTGATGACAGATCCCGTCATTGTTTCAACTGGACAG
ACCTATGAACGATCTTGTATTGAGAAGTGGCTGGAAGCTGGACATAGCACTTGTCCCAAG
ACTCAACAAGCCCTCACAAGCAAATCTCTGACACCCAACTATGTATTGCGTAGCCTTATA
GCACAGTGGTGTGAAGCGAATGGGATTGAACCACCTAAAAGACCAGGCAGTTCTCCACCC
AAAAAGTCTGCATCTGCATGCACTCCTGCTGAACACTCGATGATAGAGAATCTCCTGAGA
AAGCTCAAATCTGGTAGCCCCGAAGAGGCGCGTTCTGCTGCAGGTGAAATCCGCCTTCTT
GCTAAGCGTAATACTGATAACCGTGTTGCAATAGCTGAAGCTGGTGCCATTCCTCTGCTA
GTCCATCTTCTATCCACACCTGATTCTCGAACTCAAGAGCATGCTGTTACAGCACTTCTC
AACCTTTCCATATGTGAGAATAATAAAGGACACATCGTAACTTCAAGGGCAGTGCCTGGT
ATTGTTCATGTACTCAGGAAGGGGAGCATGGAAGCACGTGAAAATGCAGCAGCCACCCTT
TTCAGCCTTTCAGTTATCGATGAAAATAAGGTCACCATTGGTTCTTCAGGAGCGATTCCT
CCGCTTGTGGCGTTACTAAGTGAAGGTACACAAAGGGGAAAGAAAGACGCGGCTACAGCA
CTTTTCAATCTATGCATTTATCAAGGGAACAAGGGCAGGGCAATAAGGGCTGGAGTTGTA
CCTACATTGATGCAGCTGCTCACAAAACCTCAAGGTGGTATGGTTGATGAAGCACTTGCT
ATATTAGCAATCTTGTCAAGTCATCCAGAAGGGAAGGCAGCTATCGGAGCTGCAGACGCG
GTTCCTGTTTTGGTAGACGTGATCTCAAATGGTTCTCCCAGAAACAAAGAAAATGCTGCT
GCAGTTTTAGTACACCTCTGCTCTGGGGACCAACATCATCTGGTCGAAGCACAGCGACTT
GGTTTGATAGGTCCTTTGACGGATTTAGTACAAAATGGAACCGAAAGAGGCAGACGAAAA
GCAACCCAACTGCTTGAAAGAATGAACAGACTTGCCGAGCAGACAAAACAGCCCCAGGCG
CAGGCCGAGTCTCAAACTCAAAACCAGGTCTCGCGGTCACCACCGGCCTCATCAACTAAT
GCCATTGAGAGTTGA