Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001026
CDS Infomation

pacid=37448302 polypeptide=PGSC0003DMP400000757 locus=PGSC0003DMG400000381 ID=PGSC0003DMT400001026.v4.03 annot-version=v4.03
Sequence

ATGGCAACTCTAACACCAGGAATTCTACTGAAGTTACTTCAGTCAATGAACACCGGAGCA
AGAGTCACCGGCGACCACCGTACGCCGTTGTTACAGGTGATTGGAATTGTACCGGCGCTT
TCGACTTCCGATTCCCTGTGGCCTCATAATGGTTTTTTTGTTCAGCTTTCTGATTCTCTC
AACTCTACTTATGTTTCCCTTTCGGAGCGTGACACAGATCTCATCCTCACGAACCGGCTT
CAGCTTGGTCAGTTTGTTCATGTTGACCGGTTCTGTTTTGATTCTCCGCCTGTTCCACGG
GCAGTCAATATTCGGTCTATTGCTGGTCGACACGGGTTTATTGGCTCGCCGGAACCCTTA
ATTGCTCGGATTTCAGGTGGGGGATTTCTCATCCAACCCGTTTCTGATTCGGATCCTATT
GCTGCTTATTTGTCGAAAAATGGAAGAACAGAGACGGGTTCAGGTCCGGGTTTGAAAGAT
GGGAAAGAAAAACTCAGGGTAAGAGAAGTGCTTGCACCAAAAGAAAATGTGGAAATTAAG
GAAGATTCGAGTAAAAATTGTTCTGCTCCGAAGAGATTTTCGTCTCCTGCATCAGTTAAA
CAGAGATCAATATCAGCAGGGAAGAAGAATTTGGTAGCGGAAAGGGATCCATCACCATCA
GGGAAAGTGAAGAGATCAGCATCACCAGCGCCATCAAAGTCCGTGGTGCCAAGTTTGGTA
GCTGCAAAAGAGGAAAATCGGAGGACATCGAAGGAACCAGCTATTATAGTTCCATCAAGG
TATAGGCAGCCATCACCTACATCAGGGAGAAGGCAGGCAAGTCCATCGGTGGCAAGACGG
ATGTCGTTATCACCTGGACGACGATTGTCTAGTGGTCTTAAGGTTTCTCCTGCTGTGGAT
TCTTCTGGAAAGAAGAAGATGACTTCTATTGCTGCTGGAATTTCCAAAGTTTCAGAGGCA
ATTGTGGGGTCTGGTAAATCAAGTAGAAAGAGTTGGGATGAAGGTCCAGCAAATAGTGGT
GATTCTTTGGAACAAACAGAGAAGATTTTTTCGAAGAAAAAACCGGATATTCAGGCAATT
CTGAGAACTCAGGCTGCTATTTCTAGGCGTTTGAGTGATGTAAGCTGTCATGCTGAGGAT
TTTGGAAGTGAGGGAAAATTAAAATCTGGTGCTGTGGAAAATTCCCCTGACGCTGGAAAG
CCTAGTAATGAAGCTCCAGTGATTCCAGTTCATGAGAAGAAGTGGACTGATGGAAGTGTA
CCACTACACTCCGTATCCTCAGAACTTGCGAAGCTTGGAAAGGAGGCAATGCAAAGGAGA
ATAATTGCTTCAACAGCTGCAGCTGAAGCATTGGAAGAGGCCCTTGCCATTGAGACTATT
GTTAGAAATTTGAGTATGTTTGCAGATTTACGCTCAACATCCAACCCTAAAAACCCTCTA
CCAACTATTGATTGTTTCATGTCAATTTACGAAGATGTGGTGAAATCAACATGTGTTGCT
GAATCAATCACCAGCAATCGTGGCGTGCAAAAATCTAATGAGAATATGACTATGATGGAG
CAACCAAAATCATCTCTTCTTTGGGTGGAGGCTGCTCTAGCAACTGATCTTGAAATTGTC
TCTCTCTTGACAAATCAGAACAGTGGAACTCAATCAGCATCAGTGAAAAGCTCTCCGATA
TATCAATCAACAAAACCGTCTAACAAGAATCCTTTGATGGTTTCAGCAGTAACTGGATTT
TGGACAAGGGGTAATGGGATGAATGAGACAGTAGAACTTGCAAAGAAGTTGCAATCTGAG
ATGCAAATGTGGTTCATCACTTTTGTTGAAGAGTCACTAGATGCAGGTTTTCGTGTGTTC
AAGAATTGCTCCCTGGCTTCTGATGGAGCTTCTTCCAACTGTGATTCAATTCAAGCTATT
TTGTCACAACTCAAGCGAGTCAATAACTGGTTGGATCGCGTAGTCTCCAAGAAAGATGAG
CAACTGATACAGAAGATAGAGTGCTTGAGACGAAAAATATATGGATTCGTCATTCAGCAT
GTAGGAACGACTGCTGAAAATTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400000757
PEP Infomation

pacid=37448302 transcript=PGSC0003DMT400001026 locus=PGSC0003DMG400000381 ID=PGSC0003DMT400001026.v4.03 annot-version=v4.03
Sequence

MATLTPGILLKLLQSMNTGARVTGDHRTPLLQVIGIVPALSTSDSLWPHNGFFVQLSDSL
NSTYVSLSERDTDLILTNRLQLGQFVHVDRFCFDSPPVPRAVNIRSIAGRHGFIGSPEPL
IARISGGGFLIQPVSDSDPIAAYLSKNGRTETGSGPGLKDGKEKLRVREVLAPKENVEIK
EDSSKNCSAPKRFSSPASVKQRSISAGKKNLVAERDPSPSGKVKRSASPAPSKSVVPSLV
AAKEENRRTSKEPAIIVPSRYRQPSPTSGRRQASPSVARRMSLSPGRRLSSGLKVSPAVD
SSGKKKMTSIAAGISKVSEAIVGSGKSSRKSWDEGPANSGDSLEQTEKIFSKKKPDIQAI
LRTQAAISRRLSDVSCHAEDFGSEGKLKSGAVENSPDAGKPSNEAPVIPVHEKKWTDGSV
PLHSVSSELAKLGKEAMQRRIIASTAAAEALEEALAIETIVRNLSMFADLRSTSNPKNPL
PTIDCFMSIYEDVVKSTCVAESITSNRGVQKSNENMTMMEQPKSSLLWVEAALATDLEIV
SLLTNQNSGTQSASVKSSPIYQSTKPSNKNPLMVSAVTGFWTRGNGMNETVELAKKLQSE
MQMWFITFVEESLDAGFRVFKNCSLASDGASSNCDSIQAILSQLKRVNNWLDRVVSKKDE
QLIQKIECLRRKIYGFVIQHVGTTAENS*

Transcript Sequence

Transcript ID

PGSC0003DMT400001026
Transcript Infomation

pacid=37448302 locus=PGSC0003DMG400000381 ID=PGSC0003DMT400001026.v4.03 annot-version=v4.03
Sequence

ATGGCAACTCTAACACCAGGAATTCTACTGAAGTTACTTCAGTCAATGAACACCGGAGCA
AGAGTCACCGGCGACCACCGTACGCCGTTGTTACAGGTGATTGGAATTGTACCGGCGCTT
TCGACTTCCGATTCCCTGTGGCCTCATAATGGTTTTTTTGTTCAGCTTTCTGATTCTCTC
AACTCTACTTATGTTTCCCTTTCGGAGCGTGACACAGATCTCATCCTCACGAACCGGCTT
CAGCTTGGTCAGTTTGTTCATGTTGACCGGTTCTGTTTTGATTCTCCGCCTGTTCCACGG
GCAGTCAATATTCGGTCTATTGCTGGTCGACACGGGTTTATTGGCTCGCCGGAACCCTTA
ATTGCTCGGATTTCAGGTGGGGGATTTCTCATCCAACCCGTTTCTGATTCGGATCCTATT
GCTGCTTATTTGTCGAAAAATGGAAGAACAGAGACGGGTTCAGGTCCGGGTTTGAAAGAT
GGGAAAGAAAAACTCAGGGTAAGAGAAGTGCTTGCACCAAAAGAAAATGTGGAAATTAAG
GAAGATTCGAGTAAAAATTGTTCTGCTCCGAAGAGATTTTCGTCTCCTGCATCAGTTAAA
CAGAGATCAATATCAGCAGGGAAGAAGAATTTGGTAGCGGAAAGGGATCCATCACCATCA
GGGAAAGTGAAGAGATCAGCATCACCAGCGCCATCAAAGTCCGTGGTGCCAAGTTTGGTA
GCTGCAAAAGAGGAAAATCGGAGGACATCGAAGGAACCAGCTATTATAGTTCCATCAAGG
TATAGGCAGCCATCACCTACATCAGGGAGAAGGCAGGCAAGTCCATCGGTGGCAAGACGG
ATGTCGTTATCACCTGGACGACGATTGTCTAGTGGTCTTAAGGTTTCTCCTGCTGTGGAT
TCTTCTGGAAAGAAGAAGATGACTTCTATTGCTGCTGGAATTTCCAAAGTTTCAGAGGCA
ATTGTGGGGTCTGGTAAATCAAGTAGAAAGAGTTGGGATGAAGGTCCAGCAAATAGTGGT
GATTCTTTGGAACAAACAGAGAAGATTTTTTCGAAGAAAAAACCGGATATTCAGGCAATT
CTGAGAACTCAGGCTGCTATTTCTAGGCGTTTGAGTGATGTAAGCTGTCATGCTGAGGAT
TTTGGAAGTGAGGGAAAATTAAAATCTGGTGCTGTGGAAAATTCCCCTGACGCTGGAAAG
CCTAGTAATGAAGCTCCAGTGATTCCAGTTCATGAGAAGAAGTGGACTGATGGAAGTGTA
CCACTACACTCCGTATCCTCAGAACTTGCGAAGCTTGGAAAGGAGGCAATGCAAAGGAGA
ATAATTGCTTCAACAGCTGCAGCTGAAGCATTGGAAGAGGCCCTTGCCATTGAGACTATT
GTTAGAAATTTGAGTATGTTTGCAGATTTACGCTCAACATCCAACCCTAAAAACCCTCTA
CCAACTATTGATTGTTTCATGTCAATTTACGAAGATGTGGTGAAATCAACATGTGTTGCT
GAATCAATCACCAGCAATCGTGGCGTGCAAAAATCTAATGAGAATATGACTATGATGGAG
CAACCAAAATCATCTCTTCTTTGGGTGGAGGCTGCTCTAGCAACTGATCTTGAAATTGTC
TCTCTCTTGACAAATCAGAACAGTGGAACTCAATCAGCATCAGTGAAAAGCTCTCCGATA
TATCAATCAACAAAACCGTCTAACAAGAATCCTTTGATGGTTTCAGCAGTAACTGGATTT
TGGACAAGGGGTAATGGGATGAATGAGACAGTAGAACTTGCAAAGAAGTTGCAATCTGAG
ATGCAAATGTGGTTCATCACTTTTGTTGAAGAGTCACTAGATGCAGGTTTTCGTGTGTTC
AAGAATTGCTCCCTGGCTTCTGATGGAGCTTCTTCCAACTGTGATTCAATTCAAGCTATT
TTGTCACAACTCAAGCGAGTCAATAACTGGTTGGATCGCGTAGTCTCCAAGAAAGATGAG
CAACTGATACAGAAGATAGAGTGCTTGAGACGAAAAATATATGGATTCGTCATTCAGCAT
GTAGGAACGACTGCTGAAAATTCATAA