Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400001020
CDS Infomation

pacid=37449213 polypeptide=PGSC0003DMP400000753 locus=PGSC0003DMG400000377 ID=PGSC0003DMT400001020.v4.03 annot-version=v4.03
Sequence

ATGGTTAGAGAAATATATAAGATTTCAAAGTCAAGATCTTTCAATATTAGGAAGATTTTT
GAAGGAAGACATGGACATAGTCATCATCATGTTGTGTTAGAGAATAATGGACATGGCAAA
GATATGAAATTTAGGAGTCAATTAGGTGCAAAATCATCTTCATCATTAGAATTACAACAA
TTAAGTAGCATTTTAAATAAGTCTGTTGATCATGTTTCGCGATTCGCCAAGGAAGGAGAA
AGATCAAGAAACATCCACAAGGATAAACAAAGTTCAGAAATGGAGAAGATGAAAGAAAGG
TTCGCGAAGCTACTTTTAGGAGAGGACATGTCAGGTGGAGGAAAGGGCGTTTCATCGGCT
CTAGCTTTATCAAATGCCATTACTAATCTTGCAGCTTCTGTTTTTGGAGAACAAAGGAAA
TTGGAGCCAACGTCTGAGGAGAGAAAAGGAAGATGGAAAAAAGAAATCAACTGGCTTTTA
TCTGTATCAGATTACATTGTTGAATTTGTTCCTTCTCAACAAAAATCTAAGGATGGAACA
AATATTGAGGTAATGGTGACACAACAAAGAAGAGATTTGTTCATGAACATCCCAGCCTTG
AAAAAGCTTGATGCAATGCTCATTGATATCTTGGAAAATTTTAAAGATGAGAACGAGTTC
TGGTATGTCTCAAAAGATGCTGATGAATCAGAGAAAGGTGTCCAGAGGGATGATAAATGG
TGGCTACCTACAATCAAGGTTCCACCAGAGGGTCTCTCGGATACATGTCGAAAATGGCTG
CAATATCAGAAAGATTGTGTGAACCAAGTACATAGAGCATCTATGGCTATTAATGCACAA
ATACTCTCAGAAATGGAAATTCCTGAAAACTACATTGAATCTCTTCCTAAGAATGGTAGA
TCAAGTCTTGGTGATTCAATCTACAAGAGCATCACAATTGAGTTCTTTGAACCCGAACAA
TTCCTTTCAACAATGGATTTGTCTACAGAACACAAAGTTCTTGATCTTAAGGACAGAATT
GAGGCATCTATAGTGATTTGGCAGAGGAAAATGCACCTTAAAGATGGAAAATCTACATGG
GGTTTAGCTGTGAGTGCAGAGAAAAGAGAGCTTTTTGAAGAAAGAGCAGAGGCTATCTTA
CTCTTGTTAAAACAAAAATTTCCTGGAATCACTCAATCTTCTCTTGACATCAGCAAAATC
GAATATAACAACGATATAGGACATTCTGTCTTGGAGAGCTATTCAAGGGTGTTAGAAAGC
CTAGCTAACACGGTTATGTCGCGTATCGAAGATGTCCTATACGCTGACTCTCTAACACAA
GATCCATCACTTGCAATCGAAAAGTTGAACCTCTCATCAGCTGATTCCTCACCTCAATTT
CCACTAAGTGGTATGTCAAGTCCTAGGGAACTAGAGGCAGAGGTGTTAAGTTCTGCTGCA
CAAACACCAGCAGCAGAAACACCGACTTTATCTGATTTCATTGGTTGGAGTGAAGAGCTA
GGAGACACAGGAATGAAAAAGAATCGTTCAACGGGTAACTTGGAGGCTTATTTCAAAGGT
GAAAATGACTACAATTGCATAGGGAAACTAGCTAGTATTACTCCCAAGAAACTTTCCTAC
ACTGAAAAGATTGGAAGTGGCCTAAGAAGTCCAACATCTCGACATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000753
PEP Infomation

pacid=37449213 transcript=PGSC0003DMT400001020 locus=PGSC0003DMG400000377 ID=PGSC0003DMT400001020.v4.03 annot-version=v4.03
Sequence

MVREIYKISKSRSFNIRKIFEGRHGHSHHHVVLENNGHGKDMKFRSQLGAKSSSSLELQQ
LSSILNKSVDHVSRFAKEGERSRNIHKDKQSSEMEKMKERFAKLLLGEDMSGGGKGVSSA
LALSNAITNLAASVFGEQRKLEPTSEERKGRWKKEINWLLSVSDYIVEFVPSQQKSKDGT
NIEVMVTQQRRDLFMNIPALKKLDAMLIDILENFKDENEFWYVSKDADESEKGVQRDDKW
WLPTIKVPPEGLSDTCRKWLQYQKDCVNQVHRASMAINAQILSEMEIPENYIESLPKNGR
SSLGDSIYKSITIEFFEPEQFLSTMDLSTEHKVLDLKDRIEASIVIWQRKMHLKDGKSTW
GLAVSAEKRELFEERAEAILLLLKQKFPGITQSSLDISKIEYNNDIGHSVLESYSRVLES
LANTVMSRIEDVLYADSLTQDPSLAIEKLNLSSADSSPQFPLSGMSSPRELEAEVLSSAA
QTPAAETPTLSDFIGWSEELGDTGMKKNRSTGNLEAYFKGENDYNCIGKLASITPKKLSY
TEKIGSGLRSPTSRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400001020
Transcript Infomation

pacid=37449213 locus=PGSC0003DMG400000377 ID=PGSC0003DMT400001020.v4.03 annot-version=v4.03
Sequence

ATGGTTAGAGAAATATATAAGATTTCAAAGTCAAGATCTTTCAATATTAGGAAGATTTTT
GAAGGAAGACATGGACATAGTCATCATCATGTTGTGTTAGAGAATAATGGACATGGCAAA
GATATGAAATTTAGGAGTCAATTAGGTGCAAAATCATCTTCATCATTAGAATTACAACAA
TTAAGTAGCATTTTAAATAAGTCTGTTGATCATGTTTCGCGATTCGCCAAGGAAGGAGAA
AGATCAAGAAACATCCACAAGGATAAACAAAGTTCAGAAATGGAGAAGATGAAAGAAAGG
TTCGCGAAGCTACTTTTAGGAGAGGACATGTCAGGTGGAGGAAAGGGCGTTTCATCGGCT
CTAGCTTTATCAAATGCCATTACTAATCTTGCAGCTTCTGTTTTTGGAGAACAAAGGAAA
TTGGAGCCAACGTCTGAGGAGAGAAAAGGAAGATGGAAAAAAGAAATCAACTGGCTTTTA
TCTGTATCAGATTACATTGTTGAATTTGTTCCTTCTCAACAAAAATCTAAGGATGGAACA
AATATTGAGGTAATGGTGACACAACAAAGAAGAGATTTGTTCATGAACATCCCAGCCTTG
AAAAAGCTTGATGCAATGCTCATTGATATCTTGGAAAATTTTAAAGATGAGAACGAGTTC
TGGTATGTCTCAAAAGATGCTGATGAATCAGAGAAAGGTGTCCAGAGGGATGATAAATGG
TGGCTACCTACAATCAAGGTTCCACCAGAGGGTCTCTCGGATACATGTCGAAAATGGCTG
CAATATCAGAAAGATTGTGTGAACCAAGTACATAGAGCATCTATGGCTATTAATGCACAA
ATACTCTCAGAAATGGAAATTCCTGAAAACTACATTGAATCTCTTCCTAAGAATGGTAGA
TCAAGTCTTGGTGATTCAATCTACAAGAGCATCACAATTGAGTTCTTTGAACCCGAACAA
TTCCTTTCAACAATGGATTTGTCTACAGAACACAAAGTTCTTGATCTTAAGGACAGAATT
GAGGCATCTATAGTGATTTGGCAGAGGAAAATGCACCTTAAAGATGGAAAATCTACATGG
GGTTTAGCTGTGAGTGCAGAGAAAAGAGAGCTTTTTGAAGAAAGAGCAGAGGCTATCTTA
CTCTTGTTAAAACAAAAATTTCCTGGAATCACTCAATCTTCTCTTGACATCAGCAAAATC
GAATATAACAACGATATAGGACATTCTGTCTTGGAGAGCTATTCAAGGGTGTTAGAAAGC
CTAGCTAACACGGTTATGTCGCGTATCGAAGATGTCCTATACGCTGACTCTCTAACACAA
GATCCATCACTTGCAATCGAAAAGTTGAACCTCTCATCAGCTGATTCCTCACCTCAATTT
CCACTAAGTGGTATGTCAAGTCCTAGGGAACTAGAGGCAGAGGTGTTAAGTTCTGCTGCA
CAAACACCAGCAGCAGAAACACCGACTTTATCTGATTTCATTGGTTGGAGTGAAGAGCTA
GGAGACACAGGAATGAAAAAGAATCGTTCAACGGGTAACTTGGAGGCTTATTTCAAAGGT
GAAAATGACTACAATTGCATAGGGAAACTAGCTAGTATTACTCCCAAGAAACTTTCCTAC
ACTGAAAAGATTGGAAGTGGCCTAAGAAGTCCAACATCTCGACATTAA