Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000989
CDS Infomation

pacid=37446901 polypeptide=PGSC0003DMP400000730 locus=PGSC0003DMG400000366 ID=PGSC0003DMT400000989.v4.03 annot-version=v4.03
Sequence

ATGAAGTACAGCTCGGAGTTTCAATCTGTGTGTCAAATTGATAAAAGGAAATGGATTTTG
GTAGTGGTTTTGGTGGCTGTGACTCATTTATTTTGTCAGACCTTGATGCTTCCGTATGGA
AATGCTCTTCATTCTCTGTTATCTGAGAGCAATATTCAGCTACCTGAAAAGGTAAGCCTG
TCGAGTAAAGAATCTTCTGTTGTTGAATCAACTAAGGTTGGCGAAAGCTTTTCAGGAACG
CTTTCAAGCTTTGATGATGTACATATGTTGGCTCATCGCTTGAAAACTGTGGATAACGGT
GATGTGAGTGAAGATGGTGAAATCGATGAGAGCGTAAATGAGAAGGATGAGGTAAAACCA
CATAGCAATCATTCAGTTGTCAAAACCATGGAAAATGACTCTGATTTTGTTGAAGATGCA
ATTCTTGAGAATGATAATCTATTTGATGAAGTGGTGGACATGGACGAGGAAACTACAACG
CAGAAGAACAATGAATCTAGACGGGACCTTTCTTTAGAGCAAGTTGTAAAAACAAATGGT
GAACTTTCAGCTGACTCTGAGTTAGATGCAAATAGAAATAGTGTGCTTAATGATACTAAA
GCTGCAAGTGTGACTAACTCGTCGTCTGTGGTTGCTTCAAACCAGCTAGATAACTTGCCA
TTGGTTACTATAGGTGAAATAAACTTCATTCGTACTACTAGTAACAACTCTTCAACAGGA
GATTTGACTCAACTTCTCCCAAATCATGGAAATCATTCGTTGGTGCAAAGTACAGTAAAA
AAGAAGATGAGATGCATGTTGCCGCCAAAAACAGTAACTTCAATCTCTCAGATGGAAAGG
TTACTAGTTAGGCATCGTGCTCGTTCACGTGCTATGAGACCTAGGTGGTCCTCGGAACGT
GACAAGGAAATTCTGGCTGCTAGGTTACAGATTGAGAATGCTCCACTTCTGAGGAATGAT
CGAGAACTTTATGCTCCTGCCTTTCGAAATATGTCCATGTTCAAAAGGAGCTATGAACTC
ATGGAGCGGATTCTCAAAGTTTATGTCTACAAGGAAGGGGAGAAGCCCATTTTTCATCAA
CCAATAATGAAAGGATTGTATGCATCCGAGGGATGGTTCATGAAACTAATGGAGGGAAAT
AATAGGTTTGTTGTGAAGGATCCCCGAAAAGCTCACTTGTTCTACCTGCCCTTTAGTTCA
AGAATGCTGGAGCATTCTCTATACGTTCATAATTCTCATAATCGAACAAACCTACGCCAA
TATTTGAAGGACTACTCAGAGAAGATTGCAGCAAAATACCGTTTCTGGAACAGAACTGGC
GGGGCTGATCATTTTCTCGTTGCATGCCATGACTGGGCTCCATATGAAACGAGGCATCAC
ATGGAACACTGTATCAAGGCCCTGTGCAATGCTGATGTAACCTTAGGCTTCAAAATAGGA
AGGGACGTATCCCTTCCGGAAACATATGTTCGTTCTGCCAGAAATCCTCTTAGAGATCTC
GGAGGAAAACCACCATCTCAAAGAAAAGTTCTTGCATTCTATGCTGGGAATATGCACGGA
TACTTGCGTCCGATCTTGCTCGAGCATTGGAAAGACAAAGATCCCGATATGGAGATCTTT
GGTCCCATGCCAAGTGGTGTTGCTAGCAAAATGAATTATATCCAGCATATGAAGAGCAGT
AAGTTCTGCATCTGTCCAAAGGGCTATGAAGTCAACAGCCCGAGAGTAGTAGAGGCCATA
TTTTACGAATGTGTGCCAGTGATCATATCGGATAATTTCGTGCCTCCCTTTTTCGGAGTC
TTGAATTGGGATACGTTCTCGTTAATCCTAGCTGAGAAGGATATTCCGAACTTGAAAAGC
ATACTTCTCTCCATACCGGAAAATAAGTATCTCGAAATGCAGCTAGCTGTCAGGAAGGTT
CAGCGCCATTTCCTTTGGCACGCGAAGCCGGTAAAATACGACTTATTTCATATGACACTT
CATTCAATTTGGTACAATAGAGTTTTTCAAACAAAAGCTAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000730
PEP Infomation

pacid=37446901 transcript=PGSC0003DMT400000989 locus=PGSC0003DMG400000366 ID=PGSC0003DMT400000989.v4.03 annot-version=v4.03
Sequence

MKYSSEFQSVCQIDKRKWILVVVLVAVTHLFCQTLMLPYGNALHSLLSESNIQLPEKVSL
SSKESSVVESTKVGESFSGTLSSFDDVHMLAHRLKTVDNGDVSEDGEIDESVNEKDEVKP
HSNHSVVKTMENDSDFVEDAILENDNLFDEVVDMDEETTTQKNNESRRDLSLEQVVKTNG
ELSADSELDANRNSVLNDTKAASVTNSSSVVASNQLDNLPLVTIGEINFIRTTSNNSSTG
DLTQLLPNHGNHSLVQSTVKKKMRCMLPPKTVTSISQMERLLVRHRARSRAMRPRWSSER
DKEILAARLQIENAPLLRNDRELYAPAFRNMSMFKRSYELMERILKVYVYKEGEKPIFHQ
PIMKGLYASEGWFMKLMEGNNRFVVKDPRKAHLFYLPFSSRMLEHSLYVHNSHNRTNLRQ
YLKDYSEKIAAKYRFWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTLGFKIG
RDVSLPETYVRSARNPLRDLGGKPPSQRKVLAFYAGNMHGYLRPILLEHWKDKDPDMEIF
GPMPSGVASKMNYIQHMKSSKFCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFGV
LNWDTFSLILAEKDIPNLKSILLSIPENKYLEMQLAVRKVQRHFLWHAKPVKYDLFHMTL
HSIWYNRVFQTKAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400000989
Transcript Infomation

pacid=37446901 locus=PGSC0003DMG400000366 ID=PGSC0003DMT400000989.v4.03 annot-version=v4.03
Sequence

ATGAAGTACAGCTCGGAGTTTCAATCTGTGTGTCAAATTGATAAAAGGAAATGGATTTTG
GTAGTGGTTTTGGTGGCTGTGACTCATTTATTTTGTCAGACCTTGATGCTTCCGTATGGA
AATGCTCTTCATTCTCTGTTATCTGAGAGCAATATTCAGCTACCTGAAAAGGTAAGCCTG
TCGAGTAAAGAATCTTCTGTTGTTGAATCAACTAAGGTTGGCGAAAGCTTTTCAGGAACG
CTTTCAAGCTTTGATGATGTACATATGTTGGCTCATCGCTTGAAAACTGTGGATAACGGT
GATGTGAGTGAAGATGGTGAAATCGATGAGAGCGTAAATGAGAAGGATGAGGTAAAACCA
CATAGCAATCATTCAGTTGTCAAAACCATGGAAAATGACTCTGATTTTGTTGAAGATGCA
ATTCTTGAGAATGATAATCTATTTGATGAAGTGGTGGACATGGACGAGGAAACTACAACG
CAGAAGAACAATGAATCTAGACGGGACCTTTCTTTAGAGCAAGTTGTAAAAACAAATGGT
GAACTTTCAGCTGACTCTGAGTTAGATGCAAATAGAAATAGTGTGCTTAATGATACTAAA
GCTGCAAGTGTGACTAACTCGTCGTCTGTGGTTGCTTCAAACCAGCTAGATAACTTGCCA
TTGGTTACTATAGGTGAAATAAACTTCATTCGTACTACTAGTAACAACTCTTCAACAGGA
GATTTGACTCAACTTCTCCCAAATCATGGAAATCATTCGTTGGTGCAAAGTACAGTAAAA
AAGAAGATGAGATGCATGTTGCCGCCAAAAACAGTAACTTCAATCTCTCAGATGGAAAGG
TTACTAGTTAGGCATCGTGCTCGTTCACGTGCTATGAGACCTAGGTGGTCCTCGGAACGT
GACAAGGAAATTCTGGCTGCTAGGTTACAGATTGAGAATGCTCCACTTCTGAGGAATGAT
CGAGAACTTTATGCTCCTGCCTTTCGAAATATGTCCATGTTCAAAAGGAGCTATGAACTC
ATGGAGCGGATTCTCAAAGTTTATGTCTACAAGGAAGGGGAGAAGCCCATTTTTCATCAA
CCAATAATGAAAGGATTGTATGCATCCGAGGGATGGTTCATGAAACTAATGGAGGGAAAT
AATAGGTTTGTTGTGAAGGATCCCCGAAAAGCTCACTTGTTCTACCTGCCCTTTAGTTCA
AGAATGCTGGAGCATTCTCTATACGTTCATAATTCTCATAATCGAACAAACCTACGCCAA
TATTTGAAGGACTACTCAGAGAAGATTGCAGCAAAATACCGTTTCTGGAACAGAACTGGC
GGGGCTGATCATTTTCTCGTTGCATGCCATGACTGGGCTCCATATGAAACGAGGCATCAC
ATGGAACACTGTATCAAGGCCCTGTGCAATGCTGATGTAACCTTAGGCTTCAAAATAGGA
AGGGACGTATCCCTTCCGGAAACATATGTTCGTTCTGCCAGAAATCCTCTTAGAGATCTC
GGAGGAAAACCACCATCTCAAAGAAAAGTTCTTGCATTCTATGCTGGGAATATGCACGGA
TACTTGCGTCCGATCTTGCTCGAGCATTGGAAAGACAAAGATCCCGATATGGAGATCTTT
GGTCCCATGCCAAGTGGTGTTGCTAGCAAAATGAATTATATCCAGCATATGAAGAGCAGT
AAGTTCTGCATCTGTCCAAAGGGCTATGAAGTCAACAGCCCGAGAGTAGTAGAGGCCATA
TTTTACGAATGTGTGCCAGTGATCATATCGGATAATTTCGTGCCTCCCTTTTTCGGAGTC
TTGAATTGGGATACGTTCTCGTTAATCCTAGCTGAGAAGGATATTCCGAACTTGAAAAGC
ATACTTCTCTCCATACCGGAAAATAAGTATCTCGAAATGCAGCTAGCTGTCAGGAAGGTT
CAGCGCCATTTCCTTTGGCACGCGAAGCCGGTAAAATACGACTTATTTCATATGACACTT
CATTCAATTTGGTACAATAGAGTTTTTCAAACAAAAGCTAGATGA