Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000952
CDS Infomation

pacid=37446572 polypeptide=PGSC0003DMP400000705 locus=PGSC0003DMG400000356 ID=PGSC0003DMT400000952.v4.03 annot-version=v4.03
Sequence

ATGACAAAGTTAACATTTTTCACCTTCATAGTACTAGCCACTTCAATTTCCTTTATTTTC
TTGGAAACCCCACCAAAATCTTTCTATCACACTTTGTTCATATCTGATTCTTTTTCTGAT
AATTCCTCTATAGCAAATCATCTTTATACCTTAACTAAGAGACCCCATGTTGCTGGTTCT
CAAGCTAATGCTGATGCAGCAGCTTATGTTCTGTCAATTTTCACTTCTTGTAACATACCA
TCACATTTAACATCCTATGATGTGGCCTTAACTTATCCTGTCTCAAGGTCTTTAACCCTA
AAATCTTCAGAAAAAACAATAAAGTTTGGTCTTTTTCAAGAGATTTATGATGGTGATCCA
TATGCAGAGGTGGCTAATGAAGTATTACCTACCTTTCATGCTTATGCTAGATCAGGTACC
GCGACTGGTCCTGTGGTATATGCAAATTACGGGCGTGTAGAGGACTATGCGACATTGAGA
GAAATGGGAGTTAATGTATCTAATACTGTTGTATTGGCAAGATATGGGAAGATATACAGG
GGAGACATTGTACATAATGCTCATGCTGTTGGTGCAATAGGGGTGTTAATTTTTACTGAT
AAAAAGGACTATGGTGGCGAAAAATGGTTTCCGGACGATAAGTGGATGCCACCAAGTGGA
GTTCAAGTTGGATCAGTGTATGATGGAATTGGTGATCCTACAACACCAGGGTGGCCTAGT
ACCGGAGAATGTGAGAGATTATCAGACGAGGAAGTTGACGAGGGAGGAAATGTACCATTG
ATACCATCATTGCCAATTTCTTGGGCTGATGGAGATGCAATCATAAGGACCATTGGTGGA
AAAGTAGCAAATGTGGATTGGCAAGGAGGAAAGGATAGTCCTATTTATAGAGTTGGGCCG
GGACCTGCAATTGCAAATCTCTCTTATGAAGGACAACAAGTCATAAGCACAATCCAAAAT
GTTATTGCAGTTATAGAAGGAGAAGAAGAACCTGATCGGTTTGTTATACTAGGTAATCAT
CGCGATGCGTGGACATTTGGAGCTGTTGATCCAAATAGTGGCACAGCATCCCTACTTGAG
ATTGCACAACGGCTCGAAAAGCTGCAAAAAAGAGGGTGGAGACCGCGAAGAACAATCATC
TTATGCAACTGGGACGCTGAGGAGTATGGCCTGATAGGTTCAACAGAATGGGTTGAAGAA
AATAGGGAAATGCTAGCTGCAAGGGTCGTCGCCTACTTGAACGTTGATTGTGCTGTTCAA
GCAGGAGATTTTCGAGCCTCTGCAACACCACAGCTTGATGAACTAATCATACTAGCTTCT
CAGCAGGTCCAAGACCCCGATAACTCCTCACAAACTATTTACCAATCTTGGCTCGCTTCT
GGCAACGATACAACAGTAAAGCTCGGGAGATTAGGAGGATCTGGATCGGATTATGCGGCA
TTTGTTCAACACATTGGAGCTCCAGCAGTAGACATGTCTTTTGGACAAGGTTACCCAATA
TACCATTCGATGTACGATGACTTTGTTTGGATGAAGAAATTTGGAGACCCGATGTTTCAT
AGGCATGTAGCAGCGGCAAGCATATGGGGTTTGGTAGCTCTTCGACTTGCAGACGATGAA
GTTTTGCCTTTTAATTACCTATCGTACGCGTATGAGCTCCAGAAAAGTGCAGAACACTTG
GAAGCTGAGATATCAGACAAGGGCATTTCACTTGTTCCTTTGTATGCTTCTATTGAAAAA
CTCAGAAAAGCAGCCACAAGAATTAAGAACGACATAAAGGCACTCAAAGCAAAAAGAAGT
CGTGCATCAATGAGAGAGTTGAACGATAGACTAATAATGACAGAACGAGCATTCACAGAC
AGAGACGGGCTTTCTTCAAGGACATGGTACAAACATTTGATTTACGCGCCAGCAAAACAC
GATGACTATGGATCTAAGTCATTTCCCGGTATATCTGACGCTATTGAGAATGCCAAGAGC
CTGAATTCTTCAGACTCCTGGCATTCTGTACAACATGAAGTTTGGCGAGTTGCTCGAGCC
ATCACACAAGCATCACTAGTCCTCAGCGGTCGACTAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000705
PEP Infomation

pacid=37446572 transcript=PGSC0003DMT400000952 locus=PGSC0003DMG400000356 ID=PGSC0003DMT400000952.v4.03 annot-version=v4.03
Sequence

MTKLTFFTFIVLATSISFIFLETPPKSFYHTLFISDSFSDNSSIANHLYTLTKRPHVAGS
QANADAAAYVLSIFTSCNIPSHLTSYDVALTYPVSRSLTLKSSEKTIKFGLFQEIYDGDP
YAEVANEVLPTFHAYARSGTATGPVVYANYGRVEDYATLREMGVNVSNTVVLARYGKIYR
GDIVHNAHAVGAIGVLIFTDKKDYGGEKWFPDDKWMPPSGVQVGSVYDGIGDPTTPGWPS
TGECERLSDEEVDEGGNVPLIPSLPISWADGDAIIRTIGGKVANVDWQGGKDSPIYRVGP
GPAIANLSYEGQQVISTIQNVIAVIEGEEEPDRFVILGNHRDAWTFGAVDPNSGTASLLE
IAQRLEKLQKRGWRPRRTIILCNWDAEEYGLIGSTEWVEENREMLAARVVAYLNVDCAVQ
AGDFRASATPQLDELIILASQQVQDPDNSSQTIYQSWLASGNDTTVKLGRLGGSGSDYAA
FVQHIGAPAVDMSFGQGYPIYHSMYDDFVWMKKFGDPMFHRHVAAASIWGLVALRLADDE
VLPFNYLSYAYELQKSAEHLEAEISDKGISLVPLYASIEKLRKAATRIKNDIKALKAKRS
RASMRELNDRLIMTERAFTDRDGLSSRTWYKHLIYAPAKHDDYGSKSFPGISDAIENAKS
LNSSDSWHSVQHEVWRVARAITQASLVLSGRLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400000952
Transcript Infomation

pacid=37446572 locus=PGSC0003DMG400000356 ID=PGSC0003DMT400000952.v4.03 annot-version=v4.03
Sequence

ATGACAAAGTTAACATTTTTCACCTTCATAGTACTAGCCACTTCAATTTCCTTTATTTTC
TTGGAAACCCCACCAAAATCTTTCTATCACACTTTGTTCATATCTGATTCTTTTTCTGAT
AATTCCTCTATAGCAAATCATCTTTATACCTTAACTAAGAGACCCCATGTTGCTGGTTCT
CAAGCTAATGCTGATGCAGCAGCTTATGTTCTGTCAATTTTCACTTCTTGTAACATACCA
TCACATTTAACATCCTATGATGTGGCCTTAACTTATCCTGTCTCAAGGTCTTTAACCCTA
AAATCTTCAGAAAAAACAATAAAGTTTGGTCTTTTTCAAGAGATTTATGATGGTGATCCA
TATGCAGAGGTGGCTAATGAAGTATTACCTACCTTTCATGCTTATGCTAGATCAGGTACC
GCGACTGGTCCTGTGGTATATGCAAATTACGGGCGTGTAGAGGACTATGCGACATTGAGA
GAAATGGGAGTTAATGTATCTAATACTGTTGTATTGGCAAGATATGGGAAGATATACAGG
GGAGACATTGTACATAATGCTCATGCTGTTGGTGCAATAGGGGTGTTAATTTTTACTGAT
AAAAAGGACTATGGTGGCGAAAAATGGTTTCCGGACGATAAGTGGATGCCACCAAGTGGA
GTTCAAGTTGGATCAGTGTATGATGGAATTGGTGATCCTACAACACCAGGGTGGCCTAGT
ACCGGAGAATGTGAGAGATTATCAGACGAGGAAGTTGACGAGGGAGGAAATGTACCATTG
ATACCATCATTGCCAATTTCTTGGGCTGATGGAGATGCAATCATAAGGACCATTGGTGGA
AAAGTAGCAAATGTGGATTGGCAAGGAGGAAAGGATAGTCCTATTTATAGAGTTGGGCCG
GGACCTGCAATTGCAAATCTCTCTTATGAAGGACAACAAGTCATAAGCACAATCCAAAAT
GTTATTGCAGTTATAGAAGGAGAAGAAGAACCTGATCGGTTTGTTATACTAGGTAATCAT
CGCGATGCGTGGACATTTGGAGCTGTTGATCCAAATAGTGGCACAGCATCCCTACTTGAG
ATTGCACAACGGCTCGAAAAGCTGCAAAAAAGAGGGTGGAGACCGCGAAGAACAATCATC
TTATGCAACTGGGACGCTGAGGAGTATGGCCTGATAGGTTCAACAGAATGGGTTGAAGAA
AATAGGGAAATGCTAGCTGCAAGGGTCGTCGCCTACTTGAACGTTGATTGTGCTGTTCAA
GCAGGAGATTTTCGAGCCTCTGCAACACCACAGCTTGATGAACTAATCATACTAGCTTCT
CAGCAGGTCCAAGACCCCGATAACTCCTCACAAACTATTTACCAATCTTGGCTCGCTTCT
GGCAACGATACAACAGTAAAGCTCGGGAGATTAGGAGGATCTGGATCGGATTATGCGGCA
TTTGTTCAACACATTGGAGCTCCAGCAGTAGACATGTCTTTTGGACAAGGTTACCCAATA
TACCATTCGATGTACGATGACTTTGTTTGGATGAAGAAATTTGGAGACCCGATGTTTCAT
AGGCATGTAGCAGCGGCAAGCATATGGGGTTTGGTAGCTCTTCGACTTGCAGACGATGAA
GTTTTGCCTTTTAATTACCTATCGTACGCGTATGAGCTCCAGAAAAGTGCAGAACACTTG
GAAGCTGAGATATCAGACAAGGGCATTTCACTTGTTCCTTTGTATGCTTCTATTGAAAAA
CTCAGAAAAGCAGCCACAAGAATTAAGAACGACATAAAGGCACTCAAAGCAAAAAGAAGT
CGTGCATCAATGAGAGAGTTGAACGATAGACTAATAATGACAGAACGAGCATTCACAGAC
AGAGACGGGCTTTCTTCAAGGACATGGTACAAACATTTGATTTACGCGCCAGCAAAACAC
GATGACTATGGATCTAAGTCATTTCCCGGTATATCTGACGCTATTGAGAATGCCAAGAGC
CTGAATTCTTCAGACTCCTGGCATTCTGTACAACATGAAGTTTGGCGAGTTGCTCGAGCC
ATCACACAAGCATCACTAGTCCTCAGCGGTCGACTAACATGA