Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000884
CDS Infomation

pacid=37449104 polypeptide=PGSC0003DMP400000653 locus=PGSC0003DMG400000335 ID=PGSC0003DMT400000884.v4.03 annot-version=v4.03
Sequence

ATGTCAATTGATCAAAATTTGCACTCATCTTCTTCATCATCAAGTGAATATTCATCACTT
TTTCACAATGTTGCAAAAACATGTTATGTTACACAAGAAAATCAAACATTAACACAATTC
CCAAAAATAGAAGGCGAGGACGATGTGATAAGACAAGCATATCTTGCTGTCATATCATCG
TCCTCGCCTTCTTCATCATCTCGTGGACAAATTCAAGAGATTTTGACACGAGATCATCGA
TTAGTAACACGAAATACAACTGCATTTACAAGGTTTAGGTCAACCAATTATGCATCAATA
GGTGCAACAAGTTCATGTAGACAAAACATGTTGAAAAGGTCCATTACATTTTTCAAGAAC
TTGTATACGATGAATAGGCAAGAAGGTATTCAAGTGAATCGCGCGATGAGTACACAAGTT
CATCACATGATCTCAGAGAGAAGAAGGCGTGAAAAGCTTAACGAGAACTTTCAACATCTA
AGATCTTTGCTCCCTCCTGAAATTAAGAAGGACAAAGCATCAGTTCTTGCTAGTACAACA
GAGTACTTAAGTTCATTGAAAGATCAAGTGGAGAAACTATGTAAAAGGAATGAAATTTTA
GAAGCAACACTTTTGAGTAAGAAAGAAGTTTCTCAATTTCAACAAAATGGAAGTGGAAGA
GTATATATTTACATAACAAATATAGAAGAAAGAATTGTGGATTTGCAAGTTATAGCCAAG
GGAAAATGCAACACATTGGATTTGGTTATTTGTTTAATGGAATTCTTGAAAATGGCTAGT
TATGTAAACTTAATGGCTATTGATGCAAACACAACAATGGTTCAATCATGTCCACTTACT
CAAATAACCTTAAGACTGAGAATCCAGGGAGATGAATGGGATGAGTCTACTTTCCTGGAA
GCAACAAAAAAGGTTGTTGGGGACATGACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400000653
PEP Infomation

pacid=37449104 transcript=PGSC0003DMT400000884 locus=PGSC0003DMG400000335 ID=PGSC0003DMT400000884.v4.03 annot-version=v4.03
Sequence

MSIDQNLHSSSSSSSEYSSLFHNVAKTCYVTQENQTLTQFPKIEGEDDVIRQAYLAVISS
SSPSSSSRGQIQEILTRDHRLVTRNTTAFTRFRSTNYASIGATSSCRQNMLKRSITFFKN
LYTMNRQEGIQVNRAMSTQVHHMISERRRREKLNENFQHLRSLLPPEIKKDKASVLASTT
EYLSSLKDQVEKLCKRNEILEATLLSKKEVSQFQQNGSGRVYIYITNIEERIVDLQVIAK
GKCNTLDLVICLMEFLKMASYVNLMAIDANTTMVQSCPLTQITLRLRIQGDEWDESTFLE
ATKKVVGDMT*

Transcript Sequence

Transcript ID

PGSC0003DMT400000884
Transcript Infomation

pacid=37449104 locus=PGSC0003DMG400000335 ID=PGSC0003DMT400000884.v4.03 annot-version=v4.03
Sequence

ATGTCAATTGATCAAAATTTGCACTCATCTTCTTCATCATCAAGTGAATATTCATCACTT
TTTCACAATGTTGCAAAAACATGTTATGTTACACAAGAAAATCAAACATTAACACAATTC
CCAAAAATAGAAGGCGAGGACGATGTGATAAGACAAGCATATCTTGCTGTCATATCATCG
TCCTCGCCTTCTTCATCATCTCGTGGACAAATTCAAGAGATTTTGACACGAGATCATCGA
TTAGTAACACGAAATACAACTGCATTTACAAGGTTTAGGTCAACCAATTATGCATCAATA
GGTGCAACAAGTTCATGTAGACAAAACATGTTGAAAAGGTCCATTACATTTTTCAAGAAC
TTGTATACGATGAATAGGCAAGAAGGTATTCAAGTGAATCGCGCGATGAGTACACAAGTT
CATCACATGATCTCAGAGAGAAGAAGGCGTGAAAAGCTTAACGAGAACTTTCAACATCTA
AGATCTTTGCTCCCTCCTGAAATTAAGAAGGACAAAGCATCAGTTCTTGCTAGTACAACA
GAGTACTTAAGTTCATTGAAAGATCAAGTGGAGAAACTATGTAAAAGGAATGAAATTTTA
GAAGCAACACTTTTGAGTAAGAAAGAAGTTTCTCAATTTCAACAAAATGGAAGTGGAAGA
GTATATATTTACATAACAAATATAGAAGAAAGAATTGTGGATTTGCAAGTTATAGCCAAG
GGAAAATGCAACACATTGGATTTGGTTATTTGTTTAATGGAATTCTTGAAAATGGCTAGT
TATGTAAACTTAATGGCTATTGATGCAAACACAACAATGGTTCAATCATGTCCACTTACT
CAAATAACCTTAAGACTGAGAATCCAGGGAGATGAATGGGATGAGTCTACTTTCCTGGAA
GCAACAAAAAAGGTTGTTGGGGACATGACATAA