Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000880
CDS Infomation

pacid=37447895 polypeptide=PGSC0003DMP400000649 locus=PGSC0003DMG400000333 ID=PGSC0003DMT400000880.v4.03 annot-version=v4.03
Sequence

ATGGAGTGTGTTGGAGCTCAAAATGTTGGAGCAATGGCGGTTTTTACGCGTCCGAGATTG
AAACCATTAGTTGGGAGGAGAATTATGCCAAGAAAAAAACAATCTTTTTGGCCTATGAGT
AGTATGAAAGTGAAATGTAATAGTAGTAGTGGAAGTGAGAGTTGTGTAGTTGATAAAGAA
GATTTTGCTGATGAAGAAGATTATATAAAAGCCGGTGGTTCGCAACTTGTTTTTGTTCAA
ATGCAGCAGAAAAAAGATATGGATCAGCAGTCTAAGCTTTCTGATGAGTTGCAACAAATA
TCAGCTGGACAAACTGTACTGGATTTAGTGGTTATTGGCTGTGGTCCTGCTGGTCTTGCT
CTTGCCGCGGAGTCTGCTAAATTGGGGTTGAACGTGGGGCTCGTTGGGCCTGATCTTCCT
TTCACAAATAACTATGGCGTATGGGAGGATGAGTTCAAAGATCTTGGTCTTCAAGCCTGC
ATTGAACATGTTTGGCGGGATACCATTGTATATCTTGATGATGATGATCCTATTCTTATT
GGCCGTGCCTATGGAAGAGTTAGTCGCCATTTACTGCATGAGGAGTTACTCAAAAGGTGT
GTGGAGGCAGGTGTTTTGTATCTAAACTCGAAAGTGGATAGGATTGTTGAGGCCACAAAT
GGCCACAGTCTTGTAGAGTGCGAGGGTGATGTTGTGATTCCCTGCAGGTTTGTGACTGTT
GCATCGGGAGCAGCCTCGGGGAAATTCTTGCAGTATGAGTTGGGAGGTCCTAGAGTTTCT
GTTCAAACAGCTTATGGAGTGGAAGTTGAGGTCGATAACAATCCATTTGACCCGAGCCTG
ATGGTTTTCATGGATTATAGAGACTATGTCAGACACGACGCTCAATCTTTAGAAGCTAAA
TATCCAACATTTCTCTATGCCATGCCCATGTCTCCAACACGAGTCTTTTTCGAGGAAACT
TGTTTGGCTTCAAAAGATGCAATGCCATTCGATCTGTTAAAGAAAAAACTGATGTTACGA
TTGAACACCCTCGGTGTAAGAATTAAAGAAATTTACGAGGAGGAATGGTCTTACATACCA
GTTGGAGGATCTTTGCCAAATACAGAACAAAAAACACTTGCATTTGGTGCTGCTGCTAGC
ATGGTTCATCCAGCCACAGGTTATTCAGTCGTCAGATCACTGTCTGAAGCTCCAAAATGC
GCCTTCGTGCTTGCAAATATATTACGACAAAATCATAGCAAGAATATGCTTACTAGTTCA
AGTACCCCGAGTATTTCAACTCAAGCTTGGAACACTCTTTGGCCACAAGAACGAAAACGA
CAAAGATCGTTTTTCCTATTTGGACTGGCTCTGATATTGCAGCTGGATATTGAGGGGATA
AGGTCATTTTTCCGCGCGTTCTTCCGTGTGCCAAAATGGATGTGGCAGGGATTTCTTGGT
TCAAGTCTTTCTTCAGCAGACCTCATGTTATTTGCCTTCTACATGTTTATTATTGCACCA
AATGACATGAGAAGAGGCTTAATCAGACATCTTTTATCTGATCCTACTGGTGCAACATTG
ATAAGAACTTATCTTACTTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400000649
PEP Infomation

pacid=37447895 transcript=PGSC0003DMT400000880 locus=PGSC0003DMG400000333 ID=PGSC0003DMT400000880.v4.03 annot-version=v4.03
Sequence

MECVGAQNVGAMAVFTRPRLKPLVGRRIMPRKKQSFWPMSSMKVKCNSSSGSESCVVDKE
DFADEEDYIKAGGSQLVFVQMQQKKDMDQQSKLSDELQQISAGQTVLDLVVIGCGPAGLA
LAAESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDDPILI
GRAYGRVSRHLLHEELLKRCVEAGVLYLNSKVDRIVEATNGHSLVECEGDVVIPCRFVTV
ASGAASGKFLQYELGGPRVSVQTAYGVEVEVDNNPFDPSLMVFMDYRDYVRHDAQSLEAK
YPTFLYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIP
VGGSLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCAFVLANILRQNHSKNMLTSS
STPSISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFLG
SSLSSADLMLFAFYMFIIAPNDMRRGLIRHLLSDPTGATLIRTYLTF*

Transcript Sequence

Transcript ID

PGSC0003DMT400000880
Transcript Infomation

pacid=37447895 locus=PGSC0003DMG400000333 ID=PGSC0003DMT400000880.v4.03 annot-version=v4.03
Sequence

ATGGAGTGTGTTGGAGCTCAAAATGTTGGAGCAATGGCGGTTTTTACGCGTCCGAGATTG
AAACCATTAGTTGGGAGGAGAATTATGCCAAGAAAAAAACAATCTTTTTGGCCTATGAGT
AGTATGAAAGTGAAATGTAATAGTAGTAGTGGAAGTGAGAGTTGTGTAGTTGATAAAGAA
GATTTTGCTGATGAAGAAGATTATATAAAAGCCGGTGGTTCGCAACTTGTTTTTGTTCAA
ATGCAGCAGAAAAAAGATATGGATCAGCAGTCTAAGCTTTCTGATGAGTTGCAACAAATA
TCAGCTGGACAAACTGTACTGGATTTAGTGGTTATTGGCTGTGGTCCTGCTGGTCTTGCT
CTTGCCGCGGAGTCTGCTAAATTGGGGTTGAACGTGGGGCTCGTTGGGCCTGATCTTCCT
TTCACAAATAACTATGGCGTATGGGAGGATGAGTTCAAAGATCTTGGTCTTCAAGCCTGC
ATTGAACATGTTTGGCGGGATACCATTGTATATCTTGATGATGATGATCCTATTCTTATT
GGCCGTGCCTATGGAAGAGTTAGTCGCCATTTACTGCATGAGGAGTTACTCAAAAGGTGT
GTGGAGGCAGGTGTTTTGTATCTAAACTCGAAAGTGGATAGGATTGTTGAGGCCACAAAT
GGCCACAGTCTTGTAGAGTGCGAGGGTGATGTTGTGATTCCCTGCAGGTTTGTGACTGTT
GCATCGGGAGCAGCCTCGGGGAAATTCTTGCAGTATGAGTTGGGAGGTCCTAGAGTTTCT
GTTCAAACAGCTTATGGAGTGGAAGTTGAGGTCGATAACAATCCATTTGACCCGAGCCTG
ATGGTTTTCATGGATTATAGAGACTATGTCAGACACGACGCTCAATCTTTAGAAGCTAAA
TATCCAACATTTCTCTATGCCATGCCCATGTCTCCAACACGAGTCTTTTTCGAGGAAACT
TGTTTGGCTTCAAAAGATGCAATGCCATTCGATCTGTTAAAGAAAAAACTGATGTTACGA
TTGAACACCCTCGGTGTAAGAATTAAAGAAATTTACGAGGAGGAATGGTCTTACATACCA
GTTGGAGGATCTTTGCCAAATACAGAACAAAAAACACTTGCATTTGGTGCTGCTGCTAGC
ATGGTTCATCCAGCCACAGGTTATTCAGTCGTCAGATCACTGTCTGAAGCTCCAAAATGC
GCCTTCGTGCTTGCAAATATATTACGACAAAATCATAGCAAGAATATGCTTACTAGTTCA
AGTACCCCGAGTATTTCAACTCAAGCTTGGAACACTCTTTGGCCACAAGAACGAAAACGA
CAAAGATCGTTTTTCCTATTTGGACTGGCTCTGATATTGCAGCTGGATATTGAGGGGATA
AGGTCATTTTTCCGCGCGTTCTTCCGTGTGCCAAAATGGATGTGGCAGGGATTTCTTGGT
TCAAGTCTTTCTTCAGCAGACCTCATGTTATTTGCCTTCTACATGTTTATTATTGCACCA
AATGACATGAGAAGAGGCTTAATCAGACATCTTTTATCTGATCCTACTGGTGCAACATTG
ATAAGAACTTATCTTACTTTTTAG