Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000874
CDS Infomation

pacid=37449602 polypeptide=PGSC0003DMP400000645 locus=PGSC0003DMG400000331 ID=PGSC0003DMT400000874.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAACAGAGAGGAGGAAGAGCAACAACAACATAGAACGGTAGCGTTGACGGAG
GAGGAAGAGGAAGAATTGGAGGAGCAATTAGGTTCTAGTTTGACTCTAGAACGAGTCGCT
GCTGCGAAGAAATTGATCGAAGATCATTATAAATCGCATATGAAACTAATCCAGGATCGT
AAACAAAGGCGTTCACTGCTAGAAAGGAAATTGGAAGGCTCTGGTGTACCAAAGGAGGAA
CAAATGAACCTTCTAAAGGAATTGGAGAGAAAAGAGACAGAGTATATCCGACTAAAGCGT
CACAAGATTTCTGTCGATGATTTTGAGCTTTTGACAATCATTGGGAGAGGAGCTTTTGGA
GAGGTCAGGTTGTGCCGGGATAAAGTATCTAAAAATATATATGCAATGAAAAAATTGAAG
AAGGCTGAAATGCTAAGTAGAGGGCAGGTTGAACATGTTAGGGCCGAAAGGAATTTGCTT
GCTGAAGTAGCGAGCCACTTTATTGTAAAACTTTTTTATTCTTTCCAAGATGCTGACTAC
TTGTATCTGGTAATGGAATATCTGCCTGGTGGTGATATGATGACGTTGCTGATGAGGGAG
GAGACATTAACTGAGACAGTCGCAAGATTTTACATTGCTCAAAGTGTTTTGGCCATAGAG
TCTATTCATAAGCATAACTATATTCACAGGGATATAAAACCTGACAATCTTCTTTTGGAC
AAAAATGGTCACATGAGGCTGTCTGATTTTGGTCTATGCAAGCCCCTTGACTGTTCGAAT
TTATCTCCTATAAATGAAAATGAAGTGATTGATGGTGAGCAAAAGGGATCTGCTAACAAG
TGGAATAGCTCCCTTGAACAACTGCAGCATTGGCAAATAAACAGGAGAAAATTAGCATTT
TCAACAGTGGGCACTCCTGACTATATTGCTCCTGAGGTTTTACTGAAGAAAGGCTATGGA
GTGGAATGTGATTGGTGGTCACTTGGCGCCATCATGTATGAGATGCTCGTTGGTTATCCC
CCTTTCTACTCCGAAGACCCGATAACGACATGTAGAAAGATTGTTCATTGGAGAAATCAC
ATAAAATTTCCAGAGGAAGCAAGATTAACTCCTGAAGCCAAAGACCTGATCTGTAAGTTG
CTTTGTGATGCTGAAAGTCGTCTTGGTTGTCGAGGAGCAGAGCAAATAAAGGCTCATCCC
TGGTTCAAAGACATAAAGTGGGATAAACTTTATAACATGGAGGCAGCATATAAGCCAGAA
GTCAATGATGCTCTTGACACTCAAAATTTCATGAAGTTTGATGAGGCAAATCAAGCACCA
GCAAAAAATAGCTCAGGACCCAATCGAAAGAAGCGTCTGATTCCCGAAGATTTAAGTTTT
GTTGGCTATACCTACAAGAATTTTGAGGCTGTCAAGGGATTGAGACATTCTTCAGGTGAT
TCTGCAGTGGATTTCCCAGGCAAGTGTTCAATCGATGACAATGAAATGCTTGTCCTCGCG
GCATCAGCAGATACTGTAACTCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000645
PEP Infomation

pacid=37449602 transcript=PGSC0003DMT400000874 locus=PGSC0003DMG400000331 ID=PGSC0003DMT400000874.v4.03 annot-version=v4.03
Sequence

MAKNREEEEQQQHRTVALTEEEEEELEEQLGSSLTLERVAAAKKLIEDHYKSHMKLIQDR
KQRRSLLERKLEGSGVPKEEQMNLLKELERKETEYIRLKRHKISVDDFELLTIIGRGAFG
EVRLCRDKVSKNIYAMKKLKKAEMLSRGQVEHVRAERNLLAEVASHFIVKLFYSFQDADY
LYLVMEYLPGGDMMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLD
KNGHMRLSDFGLCKPLDCSNLSPINENEVIDGEQKGSANKWNSSLEQLQHWQINRRKLAF
STVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSEDPITTCRKIVHWRNH
IKFPEEARLTPEAKDLICKLLCDAESRLGCRGAEQIKAHPWFKDIKWDKLYNMEAAYKPE
VNDALDTQNFMKFDEANQAPAKNSSGPNRKKRLIPEDLSFVGYTYKNFEAVKGLRHSSGD
SAVDFPGKCSIDDNEMLVLAASADTVTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400000874
Transcript Infomation

pacid=37449602 locus=PGSC0003DMG400000331 ID=PGSC0003DMT400000874.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAACAGAGAGGAGGAAGAGCAACAACAACATAGAACGGTAGCGTTGACGGAG
GAGGAAGAGGAAGAATTGGAGGAGCAATTAGGTTCTAGTTTGACTCTAGAACGAGTCGCT
GCTGCGAAGAAATTGATCGAAGATCATTATAAATCGCATATGAAACTAATCCAGGATCGT
AAACAAAGGCGTTCACTGCTAGAAAGGAAATTGGAAGGCTCTGGTGTACCAAAGGAGGAA
CAAATGAACCTTCTAAAGGAATTGGAGAGAAAAGAGACAGAGTATATCCGACTAAAGCGT
CACAAGATTTCTGTCGATGATTTTGAGCTTTTGACAATCATTGGGAGAGGAGCTTTTGGA
GAGGTCAGGTTGTGCCGGGATAAAGTATCTAAAAATATATATGCAATGAAAAAATTGAAG
AAGGCTGAAATGCTAAGTAGAGGGCAGGTTGAACATGTTAGGGCCGAAAGGAATTTGCTT
GCTGAAGTAGCGAGCCACTTTATTGTAAAACTTTTTTATTCTTTCCAAGATGCTGACTAC
TTGTATCTGGTAATGGAATATCTGCCTGGTGGTGATATGATGACGTTGCTGATGAGGGAG
GAGACATTAACTGAGACAGTCGCAAGATTTTACATTGCTCAAAGTGTTTTGGCCATAGAG
TCTATTCATAAGCATAACTATATTCACAGGGATATAAAACCTGACAATCTTCTTTTGGAC
AAAAATGGTCACATGAGGCTGTCTGATTTTGGTCTATGCAAGCCCCTTGACTGTTCGAAT
TTATCTCCTATAAATGAAAATGAAGTGATTGATGGTGAGCAAAAGGGATCTGCTAACAAG
TGGAATAGCTCCCTTGAACAACTGCAGCATTGGCAAATAAACAGGAGAAAATTAGCATTT
TCAACAGTGGGCACTCCTGACTATATTGCTCCTGAGGTTTTACTGAAGAAAGGCTATGGA
GTGGAATGTGATTGGTGGTCACTTGGCGCCATCATGTATGAGATGCTCGTTGGTTATCCC
CCTTTCTACTCCGAAGACCCGATAACGACATGTAGAAAGATTGTTCATTGGAGAAATCAC
ATAAAATTTCCAGAGGAAGCAAGATTAACTCCTGAAGCCAAAGACCTGATCTGTAAGTTG
CTTTGTGATGCTGAAAGTCGTCTTGGTTGTCGAGGAGCAGAGCAAATAAAGGCTCATCCC
TGGTTCAAAGACATAAAGTGGGATAAACTTTATAACATGGAGGCAGCATATAAGCCAGAA
GTCAATGATGCTCTTGACACTCAAAATTTCATGAAGTTTGATGAGGCAAATCAAGCACCA
GCAAAAAATAGCTCAGGACCCAATCGAAAGAAGCGTCTGATTCCCGAAGATTTAAGTTTT
GTTGGCTATACCTACAAGAATTTTGAGGCTGTCAAGGGATTGAGACATTCTTCAGGTGAT
TCTGCAGTGGATTTCCCAGGCAAGTGTTCAATCGATGACAATGAAATGCTTGTCCTCGCG
GCATCAGCAGATACTGTAACTCTGTGA