Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000852
CDS Infomation

pacid=37449242 polypeptide=PGSC0003DMP400000631 locus=PGSC0003DMG400000321 ID=PGSC0003DMT400000852.v4.03 annot-version=v4.03
Sequence

ATGGCGGAATCGAATGGGAATTCAGAAACTCAATTCCAAATTCCAAAAATTAAGTTCACA
AAGCTGTTCATCAATGGTGAATTCGTCGATTCCGTTTCAGGAAATACGTTTGAAACGATA
GATCCGAGAAATGAGGAGGTTATTGCAAGAATTAGTGAAGGTGACAAGGAGGATGTTGAT
TTGGCTGTCAAAGCCGCCCGTGAAGCTTTCGACGATGGCCCTTGGCCTCGCTTATCCCCC
TCGGAGAGGAGAAGGATAATGCTGAAATTCGCGGATTTAATCGTAGAAAATGCAGAGGAA
ATAGCAGCATTGGATGCAATGGATGCAGGGAAGTTATTTGCTCCTGTAAAGAACATGGAC
ATTCCAGCTGCAGCCGAAGTTATTCGCTATTATGCTGGTGCAGCCGATAAAATCCATGGA
ACGACTCTCAAAATGTCATGCGAGTTACAAGGATACACTTTGCTCGAACCAATTGGTGTT
GTCGGACACATTATTCCTTGGAATTTCCCAACTCAGATGTTTGTTATGAAGGTTGGCCCT
GCATTAGCAGCTGGTTGCACTATGATTGTCAAACCTGCTGAACAAACTCCTCTTTCCGCA
CTCTATTATGCTCAATTGGCTAAACAGGCAGGTGTTCCCGATGGGGTGATCAATGTCGTA
ACAGGATTTGGTTCTACTGCTGGTGCTGCGCTTTGCTCGCATATGGACGTAGACAAGATA
AGCTTCACAGGTTCGACAGAAGTAGGACGTCTAGTAATGCAGGCTGCAGCATTAAGCAAT
TTAAAACCTGTCTCGCTAGAATTGGGAGGGAAGTCGCCTTTTATAGTATTCGATGATGTA
GATGTTGACAAAGTTGCACCACTTGCCCTAGTTGGAATCCTATACAACAAGGGAGAAATT
TGTGTGGCTGGATCTCGTCTTTTCATCCAAGAAGGTATTTACGACAAATTTGTCAAGAAA
TTGGAAGAGATGGCAAAAACATGGGTGGTTGGTGATCCTTTTGATCCAAATTCTCATCAA
GGACCTCAAGTTGATAAAAAACAGTATGAGAGAGTACTTTCATACATTGAACATGGCAAG
AGGGAGGGTGCAAAATTGCTAACGGGGGGCAATGCATTGGATAGGAAGGGTTATTTCATT
GAGCCAACCATATTTATTGATGTTGAAGATGATATGACAATTGCAAAAGAAGAAATATTT
GGACCTGTACTGGCAGTAATGAAGTTCAAGACGGTAGAGGAGGTGATCAAGAGAGCTAAC
TGTACAAATTATGGACTAGCAGCAGGTGTGATGACCAATGACTTGAACATTGCTAACACA
GTTTCAAGATCGATTCGAGCTGGTGTTATCTGGATAAACTGTTACTTTGCTTTCGATCCA
GATTGCCCATATGGAGGATACAAATGCAGTGGCTTTGAAAGGGATTTGGGAATGGAAGGA
CTTCATAAGTATCTTCAAGTTAAATCTGTAGCCACTCCTATTTACAACTCTCCTTGGTTG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400000631
PEP Infomation

pacid=37449242 transcript=PGSC0003DMT400000852 locus=PGSC0003DMG400000321 ID=PGSC0003DMT400000852.v4.03 annot-version=v4.03
Sequence

MAESNGNSETQFQIPKIKFTKLFINGEFVDSVSGNTFETIDPRNEEVIARISEGDKEDVD
LAVKAAREAFDDGPWPRLSPSERRRIMLKFADLIVENAEEIAALDAMDAGKLFAPVKNMD
IPAAAEVIRYYAGAADKIHGTTLKMSCELQGYTLLEPIGVVGHIIPWNFPTQMFVMKVGP
ALAAGCTMIVKPAEQTPLSALYYAQLAKQAGVPDGVINVVTGFGSTAGAALCSHMDVDKI
SFTGSTEVGRLVMQAAALSNLKPVSLELGGKSPFIVFDDVDVDKVAPLALVGILYNKGEI
CVAGSRLFIQEGIYDKFVKKLEEMAKTWVVGDPFDPNSHQGPQVDKKQYERVLSYIEHGK
REGAKLLTGGNALDRKGYFIEPTIFIDVEDDMTIAKEEIFGPVLAVMKFKTVEEVIKRAN
CTNYGLAAGVMTNDLNIANTVSRSIRAGVIWINCYFAFDPDCPYGGYKCSGFERDLGMEG
LHKYLQVKSVATPIYNSPWL*

Transcript Sequence

Transcript ID

PGSC0003DMT400000852
Transcript Infomation

pacid=37449242 locus=PGSC0003DMG400000321 ID=PGSC0003DMT400000852.v4.03 annot-version=v4.03
Sequence

ATGGCGGAATCGAATGGGAATTCAGAAACTCAATTCCAAATTCCAAAAATTAAGTTCACA
AAGCTGTTCATCAATGGTGAATTCGTCGATTCCGTTTCAGGAAATACGTTTGAAACGATA
GATCCGAGAAATGAGGAGGTTATTGCAAGAATTAGTGAAGGTGACAAGGAGGATGTTGAT
TTGGCTGTCAAAGCCGCCCGTGAAGCTTTCGACGATGGCCCTTGGCCTCGCTTATCCCCC
TCGGAGAGGAGAAGGATAATGCTGAAATTCGCGGATTTAATCGTAGAAAATGCAGAGGAA
ATAGCAGCATTGGATGCAATGGATGCAGGGAAGTTATTTGCTCCTGTAAAGAACATGGAC
ATTCCAGCTGCAGCCGAAGTTATTCGCTATTATGCTGGTGCAGCCGATAAAATCCATGGA
ACGACTCTCAAAATGTCATGCGAGTTACAAGGATACACTTTGCTCGAACCAATTGGTGTT
GTCGGACACATTATTCCTTGGAATTTCCCAACTCAGATGTTTGTTATGAAGGTTGGCCCT
GCATTAGCAGCTGGTTGCACTATGATTGTCAAACCTGCTGAACAAACTCCTCTTTCCGCA
CTCTATTATGCTCAATTGGCTAAACAGGCAGGTGTTCCCGATGGGGTGATCAATGTCGTA
ACAGGATTTGGTTCTACTGCTGGTGCTGCGCTTTGCTCGCATATGGACGTAGACAAGATA
AGCTTCACAGGTTCGACAGAAGTAGGACGTCTAGTAATGCAGGCTGCAGCATTAAGCAAT
TTAAAACCTGTCTCGCTAGAATTGGGAGGGAAGTCGCCTTTTATAGTATTCGATGATGTA
GATGTTGACAAAGTTGCACCACTTGCCCTAGTTGGAATCCTATACAACAAGGGAGAAATT
TGTGTGGCTGGATCTCGTCTTTTCATCCAAGAAGGTATTTACGACAAATTTGTCAAGAAA
TTGGAAGAGATGGCAAAAACATGGGTGGTTGGTGATCCTTTTGATCCAAATTCTCATCAA
GGACCTCAAGTTGATAAAAAACAGTATGAGAGAGTACTTTCATACATTGAACATGGCAAG
AGGGAGGGTGCAAAATTGCTAACGGGGGGCAATGCATTGGATAGGAAGGGTTATTTCATT
GAGCCAACCATATTTATTGATGTTGAAGATGATATGACAATTGCAAAAGAAGAAATATTT
GGACCTGTACTGGCAGTAATGAAGTTCAAGACGGTAGAGGAGGTGATCAAGAGAGCTAAC
TGTACAAATTATGGACTAGCAGCAGGTGTGATGACCAATGACTTGAACATTGCTAACACA
GTTTCAAGATCGATTCGAGCTGGTGTTATCTGGATAAACTGTTACTTTGCTTTCGATCCA
GATTGCCCATATGGAGGATACAAATGCAGTGGCTTTGAAAGGGATTTGGGAATGGAAGGA
CTTCATAAGTATCTTCAAGTTAAATCTGTAGCCACTCCTATTTACAACTCTCCTTGGTTG
TAA