Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000838
CDS Infomation

pacid=37446218 polypeptide=PGSC0003DMP400000623 locus=PGSC0003DMG400000313 ID=PGSC0003DMT400000838.v4.03 annot-version=v4.03
Sequence

ATGGAAAATAGATTTAAAATGAAAATCTCTAGTTTGTTTAAATCATCATTTGGTTCTTGT
AAATCCAAGAATATTTCTGATGATATTGATAATAATAAAAAACCAGTTTTTCATACCCAA
AATCATCAACATTATCAATTAGTTGATCTTTTCTCTCCCAAACCAAGTCCATTTCCTTCC
ATGTTTAGACACAAATGCCCTCAAAATCCACTTCCGAGCAGTGGTGTACGCAGGAATTTT
TTACAAGCAGCAACATCAGTCTATTGTCACAATTCGACTTTAGATACAAATGGACGAAAA
TGCCCTCCAGCATCACCAAATTTTCCTCATGATGAGTATTCTCAAGAGAAGTGCAACTCC
AAATATTATGAAAAGAATTCCAAGAAGAAAAATAAGAAGAAGAAATTCAAGAAAATGACA
AATTCCAAAATTAAAAAATTTACTAATTTTGATGAAGAATTTGCTAATTTTCATTATAAA
GGTCTTTTTAGTAGTGATGAAGAAAGTGAATTAGATGAAGATGACAATAATACCCTTTTC
TCATCAAGGTCATTTACAAATTCTGATTCATCTGAATATTCTCTCCGGCGAAAACCACGG
CGGCGGAGGGCGGCGAAAGGTGGCGTAAAGGGTAGTCTTGCGGTGGTGAAGAAATCAAAG
GATCCTTATGGTGATTTTAGAGATTCAATGTTGGAAATGATTATGGAAAATCAAATATTT
GGTGCAAAAGAACTTGAAAATTTATTAGAATGTTTTTTAAAATTAAATTCACAATATCAT
CATGAGGTAATTATTGATGTTTTTACTGAGATTTGTGAAGCTTTGTTTTCTAGTTTGTCT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400000623
PEP Infomation

pacid=37446218 transcript=PGSC0003DMT400000838 locus=PGSC0003DMG400000313 ID=PGSC0003DMT400000838.v4.03 annot-version=v4.03
Sequence

MENRFKMKISSLFKSSFGSCKSKNISDDIDNNKKPVFHTQNHQHYQLVDLFSPKPSPFPS
MFRHKCPQNPLPSSGVRRNFLQAATSVYCHNSTLDTNGRKCPPASPNFPHDEYSQEKCNS
KYYEKNSKKKNKKKKFKKMTNSKIKKFTNFDEEFANFHYKGLFSSDEESELDEDDNNTLF
SSRSFTNSDSSEYSLRRKPRRRRAAKGGVKGSLAVVKKSKDPYGDFRDSMLEMIMENQIF
GAKELENLLECFLKLNSQYHHEVIIDVFTEICEALFSSLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400000838
Transcript Infomation

pacid=37446218 locus=PGSC0003DMG400000313 ID=PGSC0003DMT400000838.v4.03 annot-version=v4.03
Sequence

ATGGAAAATAGATTTAAAATGAAAATCTCTAGTTTGTTTAAATCATCATTTGGTTCTTGT
AAATCCAAGAATATTTCTGATGATATTGATAATAATAAAAAACCAGTTTTTCATACCCAA
AATCATCAACATTATCAATTAGTTGATCTTTTCTCTCCCAAACCAAGTCCATTTCCTTCC
ATGTTTAGACACAAATGCCCTCAAAATCCACTTCCGAGCAGTGGTGTACGCAGGAATTTT
TTACAAGCAGCAACATCAGTCTATTGTCACAATTCGACTTTAGATACAAATGGACGAAAA
TGCCCTCCAGCATCACCAAATTTTCCTCATGATGAGTATTCTCAAGAGAAGTGCAACTCC
AAATATTATGAAAAGAATTCCAAGAAGAAAAATAAGAAGAAGAAATTCAAGAAAATGACA
AATTCCAAAATTAAAAAATTTACTAATTTTGATGAAGAATTTGCTAATTTTCATTATAAA
GGTCTTTTTAGTAGTGATGAAGAAAGTGAATTAGATGAAGATGACAATAATACCCTTTTC
TCATCAAGGTCATTTACAAATTCTGATTCATCTGAATATTCTCTCCGGCGAAAACCACGG
CGGCGGAGGGCGGCGAAAGGTGGCGTAAAGGGTAGTCTTGCGGTGGTGAAGAAATCAAAG
GATCCTTATGGTGATTTTAGAGATTCAATGTTGGAAATGATTATGGAAAATCAAATATTT
GGTGCAAAAGAACTTGAAAATTTATTAGAATGTTTTTTAAAATTAAATTCACAATATCAT
CATGAGGTAATTATTGATGTTTTTACTGAGATTTGTGAAGCTTTGTTTTCTAGTTTGTCT
TAG