Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000831
CDS Infomation

pacid=37446322 polypeptide=PGSC0003DMP400000617 locus=PGSC0003DMG400000308 ID=PGSC0003DMT400000831.v4.03 annot-version=v4.03
Sequence

ATGTACAGATCATTTGTCACTTGTGATGATCCCAAAGGTGTTATTGAAGGTAAGACGATT
AAAAAGTCCAAGATCGACCCTCAAAATATCGAAGATCATAAGGTATCAAAGGATTTTGCA
AAAGACTTGTTGAAAGGAGCTTTTGATTTACAAGAGTCTTTAGTGATGTTGGGGAAACTG
CAAGAAGCTTCTGAATATGTGACAAAGTTGAGGAAAAGAGAATCTGATGCAACAGGCGTT
GGCAGGACCAAATCCGAACGTGTTGTTACAGATCACAGGTATAATAATAAGGTGGAGTTT
GGAAAGCGTAGTCTTTCTGTTGATCGTTCTCGCGATTGTTATGATGAGCTAAGGGAAGTA
ATAAGAGATAGCCTTGCTAGACAAAATCTGTTGCCACCATGTTGTGCTTCAGAAAAGGCT
CGTTTCGATAGAAGAAAAGTAGACTTGTATCAAGATTTCCCCTCTTCTAGCTTCACTAGC
TCGAGTGAGACATCGATAGAACAGGCTTGTGTTGCTGATACCAGAAAACTGGTTATGTCA
CCCGAGTTGCCGTCCACTAGCTCAAGCCAATTTGCTTCTTTTGACCGTTCTCGAGACAAG
GAGAAACCAAAAGTTCCAAATTTGATTGCACGGCTAATGGGACTTGAAGAGATTCCTTCA
ACACCCCTGCATCAGAAACAATTAGAGAAGGACATGATTTTCAAGCCAACAAGGCCTATA
TTCGAAATAGACTTGCCAAAGGCAAAGAAGCTGTCTGTCATCAACCAGAAGGCGGATCCA
AAACGGAGAACACTAGACGGAATAATTGAAACCATGCAATTCAAAGGCCTTTTGAGATGC
AAGTTTAATAATGTGATCTCTCATCAATTGAAGAGTTCTGCTGCTGATGCTCCTCCAATT
GTGATCATGAAGCCCGTGTACGCTCCTGAACTGCAGGCAGAAAGGTTTTCGACCTCCATC
CATGATGAAAATCCCCCGGACACTAAAACTTCATTTGGTAAACGGAACTTAAAGGAAGAG
AGTTCACCTGTGAATTTCACTGTCTATCGGAAAATGCAGACACGAAACATTCAGAAGAGT
AGCTGCATCCCTGAAAAGGGATCCAAGGACCATAGTGAAGAAACACTTCCTTTGACAAAA
AATAGAGCTTCGTCTCCTGGAAGGACTAAGCAACCAAAGAAAGAAGTGATAGAGAAAAGG
GTTGAGAGAACTCAACGAGCTCCTGGTGCAAAGAAATCTGGAGAAATGAAAAATGCTGGA
CCCAATAACACTACTAAAGTGCAAGATCAAAGTAAGAGGACCACTGCAAAAGTGACGAAA
CCTGAGAAAAAATCGAATGCACCAGAAAAACTTGTTGCATCCCAACATAGCGCTGACTCA
AAGCGCATCACAGCCGTTGCATCTCATAACTCCAGAAATAGGAAGAAGAGTGTCAAAACT
GACAAGTCAGTCAAGAGTTCCTCAATTGTCCCTATTGTTGAGAATATGGAGCACAACTAT
GAACGAGACAGTGATATAACCAAATCAAACCTTACATCCTCAGAAGAGCCGCCTTGTGAG
GAAGTAGCTGAAATCTCCCAGAGTGTTGTCACTGATAATCTTAAGAATGGTGAATGTTCC
GCGACTGAATCTACCATGACATTAATCCAGTGTGGCCATAATATCCCACTAATGGAGCAC
ACTGGGTATCAAATCCGTCAAGATTCAACTGAGAAGGAAAACCTCAAATCTAGAGTCACT
ACACGACACATACTGTTGAGCAACGAATCATTCCTCATTCGGGCAGAGGAGCTTTTCGAC
ACTGATGCATGGGAACCAACAGTTTGGAAGACAATAAGTGTGGACAATGAAATGACTAAC
AGCACACTTGTACTTGATTGCGCAAACGAGTTGTTAGAAAACAAAAGGTCTCAGAGCACC
CTGACAATATCAAAAAGTCCTGTTAACATGTCTAGAGTCTCCATTTCATTCGACAAGTTG
TTGAATGAAATTTGTGACGCGATTGAAGTCTTGAGAAGTCACACTAAGGTTGATGCCAAT
ATCCTTTCAGTAGATACTCTTTATGCGTTACACGAAAGAGATATATCGTGCAACGGGGTG
ATTAGTACAACATGGGATCTTGGTTGGAGAAATGCATTTACTCTGGATGAAGTTGAACAA
ATAGTGACTGACATTGAGAAGCATGTTGTGAATGGAATTATCGACGATGCACTTACTGAA
CTCACACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000617
PEP Infomation

pacid=37446322 transcript=PGSC0003DMT400000831 locus=PGSC0003DMG400000308 ID=PGSC0003DMT400000831.v4.03 annot-version=v4.03
Sequence

MYRSFVTCDDPKGVIEGKTIKKSKIDPQNIEDHKVSKDFAKDLLKGAFDLQESLVMLGKL
QEASEYVTKLRKRESDATGVGRTKSERVVTDHRYNNKVEFGKRSLSVDRSRDCYDELREV
IRDSLARQNLLPPCCASEKARFDRRKVDLYQDFPSSSFTSSSETSIEQACVADTRKLVMS
PELPSTSSSQFASFDRSRDKEKPKVPNLIARLMGLEEIPSTPLHQKQLEKDMIFKPTRPI
FEIDLPKAKKLSVINQKADPKRRTLDGIIETMQFKGLLRCKFNNVISHQLKSSAADAPPI
VIMKPVYAPELQAERFSTSIHDENPPDTKTSFGKRNLKEESSPVNFTVYRKMQTRNIQKS
SCIPEKGSKDHSEETLPLTKNRASSPGRTKQPKKEVIEKRVERTQRAPGAKKSGEMKNAG
PNNTTKVQDQSKRTTAKVTKPEKKSNAPEKLVASQHSADSKRITAVASHNSRNRKKSVKT
DKSVKSSSIVPIVENMEHNYERDSDITKSNLTSSEEPPCEEVAEISQSVVTDNLKNGECS
ATESTMTLIQCGHNIPLMEHTGYQIRQDSTEKENLKSRVTTRHILLSNESFLIRAEELFD
TDAWEPTVWKTISVDNEMTNSTLVLDCANELLENKRSQSTLTISKSPVNMSRVSISFDKL
LNEICDAIEVLRSHTKVDANILSVDTLYALHERDISCNGVISTTWDLGWRNAFTLDEVEQ
IVTDIEKHVVNGIIDDALTELTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400000831
Transcript Infomation

pacid=37446322 locus=PGSC0003DMG400000308 ID=PGSC0003DMT400000831.v4.03 annot-version=v4.03
Sequence

ATGTACAGATCATTTGTCACTTGTGATGATCCCAAAGGTGTTATTGAAGGTAAGACGATT
AAAAAGTCCAAGATCGACCCTCAAAATATCGAAGATCATAAGGTATCAAAGGATTTTGCA
AAAGACTTGTTGAAAGGAGCTTTTGATTTACAAGAGTCTTTAGTGATGTTGGGGAAACTG
CAAGAAGCTTCTGAATATGTGACAAAGTTGAGGAAAAGAGAATCTGATGCAACAGGCGTT
GGCAGGACCAAATCCGAACGTGTTGTTACAGATCACAGGTATAATAATAAGGTGGAGTTT
GGAAAGCGTAGTCTTTCTGTTGATCGTTCTCGCGATTGTTATGATGAGCTAAGGGAAGTA
ATAAGAGATAGCCTTGCTAGACAAAATCTGTTGCCACCATGTTGTGCTTCAGAAAAGGCT
CGTTTCGATAGAAGAAAAGTAGACTTGTATCAAGATTTCCCCTCTTCTAGCTTCACTAGC
TCGAGTGAGACATCGATAGAACAGGCTTGTGTTGCTGATACCAGAAAACTGGTTATGTCA
CCCGAGTTGCCGTCCACTAGCTCAAGCCAATTTGCTTCTTTTGACCGTTCTCGAGACAAG
GAGAAACCAAAAGTTCCAAATTTGATTGCACGGCTAATGGGACTTGAAGAGATTCCTTCA
ACACCCCTGCATCAGAAACAATTAGAGAAGGACATGATTTTCAAGCCAACAAGGCCTATA
TTCGAAATAGACTTGCCAAAGGCAAAGAAGCTGTCTGTCATCAACCAGAAGGCGGATCCA
AAACGGAGAACACTAGACGGAATAATTGAAACCATGCAATTCAAAGGCCTTTTGAGATGC
AAGTTTAATAATGTGATCTCTCATCAATTGAAGAGTTCTGCTGCTGATGCTCCTCCAATT
GTGATCATGAAGCCCGTGTACGCTCCTGAACTGCAGGCAGAAAGGTTTTCGACCTCCATC
CATGATGAAAATCCCCCGGACACTAAAACTTCATTTGGTAAACGGAACTTAAAGGAAGAG
AGTTCACCTGTGAATTTCACTGTCTATCGGAAAATGCAGACACGAAACATTCAGAAGAGT
AGCTGCATCCCTGAAAAGGGATCCAAGGACCATAGTGAAGAAACACTTCCTTTGACAAAA
AATAGAGCTTCGTCTCCTGGAAGGACTAAGCAACCAAAGAAAGAAGTGATAGAGAAAAGG
GTTGAGAGAACTCAACGAGCTCCTGGTGCAAAGAAATCTGGAGAAATGAAAAATGCTGGA
CCCAATAACACTACTAAAGTGCAAGATCAAAGTAAGAGGACCACTGCAAAAGTGACGAAA
CCTGAGAAAAAATCGAATGCACCAGAAAAACTTGTTGCATCCCAACATAGCGCTGACTCA
AAGCGCATCACAGCCGTTGCATCTCATAACTCCAGAAATAGGAAGAAGAGTGTCAAAACT
GACAAGTCAGTCAAGAGTTCCTCAATTGTCCCTATTGTTGAGAATATGGAGCACAACTAT
GAACGAGACAGTGATATAACCAAATCAAACCTTACATCCTCAGAAGAGCCGCCTTGTGAG
GAAGTAGCTGAAATCTCCCAGAGTGTTGTCACTGATAATCTTAAGAATGGTGAATGTTCC
GCGACTGAATCTACCATGACATTAATCCAGTGTGGCCATAATATCCCACTAATGGAGCAC
ACTGGGTATCAAATCCGTCAAGATTCAACTGAGAAGGAAAACCTCAAATCTAGAGTCACT
ACACGACACATACTGTTGAGCAACGAATCATTCCTCATTCGGGCAGAGGAGCTTTTCGAC
ACTGATGCATGGGAACCAACAGTTTGGAAGACAATAAGTGTGGACAATGAAATGACTAAC
AGCACACTTGTACTTGATTGCGCAAACGAGTTGTTAGAAAACAAAAGGTCTCAGAGCACC
CTGACAATATCAAAAAGTCCTGTTAACATGTCTAGAGTCTCCATTTCATTCGACAAGTTG
TTGAATGAAATTTGTGACGCGATTGAAGTCTTGAGAAGTCACACTAAGGTTGATGCCAAT
ATCCTTTCAGTAGATACTCTTTATGCGTTACACGAAAGAGATATATCGTGCAACGGGGTG
ATTAGTACAACATGGGATCTTGGTTGGAGAAATGCATTTACTCTGGATGAAGTTGAACAA
ATAGTGACTGACATTGAGAAGCATGTTGTGAATGGAATTATCGACGATGCACTTACTGAA
CTCACACTATAG