Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000827
CDS Infomation

pacid=37447331 polypeptide=PGSC0003DMP400000616 locus=PGSC0003DMG400000307 ID=PGSC0003DMT400000827.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGGAATTTAATTCATCACCCAAAAGTTATACAGAAGTTGAAACTGATGATTCA
ACTAAGTTCAATAACTCTCTGCAAGAACTCAAGGATTTGTGCTCTCAGCTTCACAATGCT
GCAGATTATTGTGAGAAAGCATTTGTAAAGGCAGAAGAGAAAAGAGATGTACTGGAGAAC
ACAAAAGAGTATCTCTGCAGAGCTGTTGTTACAGTAGTCGATCATTTAGGATGTGTCTCA
GCTAAACTTGAATGCAAGATTTCAACGATTGACACAGCTTCTGAAACAGAACTTCGAATT
GATGGCTTGACTCAAAGGCTCGCGACCTGCCAGCAATACTCTCACAAGCTTGCTCTCACT
AGTCTTTGTTGGAATACTGATTTAGCAACATTTCATCGTCGCTATATATCACCACCAATT
GAAGATCTCAGGAGAATGAAACAAATGTCAAGGGGATTTGGTATGCCAATTGACAATAAG
ACTCTACACAAGGATAGATTTGAGGCAGAGGAAGATGTGCCACTATTTTTGTACACTTAC
AACTTTAAGCCTTCTCTACTTGAAGATTCGAAGCAAAAGTCTAGCTTTTCGCCTCCAGTG
CTTCCTGTTCGGGACGGACTATCTGTTGTACCAAAATCACAAAATTCCAACTTTGAGTTT
CAGGAGGCTCGAAAGCAAAAACGAAACATATTGAGTTGGAAACCAATGCATAATAAGGAT
ATCAGGTCACTCATTCGACGTGGTAGAAGAATAGTAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000616
PEP Infomation

pacid=37447331 transcript=PGSC0003DMT400000827 locus=PGSC0003DMG400000307 ID=PGSC0003DMT400000827.v4.03 annot-version=v4.03
Sequence

MEEEFNSSPKSYTEVETDDSTKFNNSLQELKDLCSQLHNAADYCEKAFVKAEEKRDVLEN
TKEYLCRAVVTVVDHLGCVSAKLECKISTIDTASETELRIDGLTQRLATCQQYSHKLALT
SLCWNTDLATFHRRYISPPIEDLRRMKQMSRGFGMPIDNKTLHKDRFEAEEDVPLFLYTY
NFKPSLLEDSKQKSSFSPPVLPVRDGLSVVPKSQNSNFEFQEARKQKRNILSWKPMHNKD
IRSLIRRGRRIVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400000827
Transcript Infomation

pacid=37447331 locus=PGSC0003DMG400000307 ID=PGSC0003DMT400000827.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGGAATTTAATTCATCACCCAAAAGTTATACAGAAGTTGAAACTGATGATTCA
ACTAAGTTCAATAACTCTCTGCAAGAACTCAAGGATTTGTGCTCTCAGCTTCACAATGCT
GCAGATTATTGTGAGAAAGCATTTGTAAAGGCAGAAGAGAAAAGAGATGTACTGGAGAAC
ACAAAAGAGTATCTCTGCAGAGCTGTTGTTACAGTAGTCGATCATTTAGGATGTGTCTCA
GCTAAACTTGAATGCAAGATTTCAACGATTGACACAGCTTCTGAAACAGAACTTCGAATT
GATGGCTTGACTCAAAGGCTCGCGACCTGCCAGCAATACTCTCACAAGCTTGCTCTCACT
AGTCTTTGTTGGAATACTGATTTAGCAACATTTCATCGTCGCTATATATCACCACCAATT
GAAGATCTCAGGAGAATGAAACAAATGTCAAGGGGATTTGGTATGCCAATTGACAATAAG
ACTCTACACAAGGATAGATTTGAGGCAGAGGAAGATGTGCCACTATTTTTGTACACTTAC
AACTTTAAGCCTTCTCTACTTGAAGATTCGAAGCAAAAGTCTAGCTTTTCGCCTCCAGTG
CTTCCTGTTCGGGACGGACTATCTGTTGTACCAAAATCACAAAATTCCAACTTTGAGTTT
CAGGAGGCTCGAAAGCAAAAACGAAACATATTGAGTTGGAAACCAATGCATAATAAGGAT
ATCAGGTCACTCATTCGACGTGGTAGAAGAATAGTAACATGA