Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000784
CDS Infomation

pacid=37446391 polypeptide=PGSC0003DMP400000581 locus=PGSC0003DMG400000289 ID=PGSC0003DMT400000784.v4.03 annot-version=v4.03
Sequence

ATGTACAGATGCGCATCGTCTCGCCTCAGCTCTCTTAAGGCACGTCAAGGCAACAGGGTC
TTGACAAGATTTTCAAGTTCAGCTGCTGTTGCAACCAAGCCATCTGGGGGTCTCTTTAGT
TGGATAACTGGTGATACATCAAGTTCAGTGACTCCCTTGGATTTCCCCCTCAATGATGTT
AAACTCTCGCCACCATTACCTGATTATGTAGAACCTGCAAAGACCCAGATAACGACTCTC
GCCAATGGTCTCAAAGTGGCCTCTGAAGCATCGGTGAACCCTGCTGCCTCAATTGGCCTC
TATGTTGACTGTGGCTCTATTTACGAGACACCAGCTTCATATGGAGCCACACACCTCTTG
GAACGCATGGCCTTCAAAAGCACATTAAACCGGAGTCACTTGCGTATTGTACGAGAAATT
GAAGCAATTGGTGGTAATGTAACAGCTTCAGCCTCACGAGAGCATATGATCTACACTTAT
GATGCTTTGAAAACTTATGTACCACAAATGGTGGAGATGCTTGCTGACTGTGTTAGAAAT
CCTGCATTCCTGGATTGGGAAGTTAAAGAACAGCTTGAGAAGGTTAAAGCTGAGATTAGC
GAGTACTCCAAAAACCCTCAACACTTGCTTTTGGAGGCAGTTCATTCTGCTGGTTATGCT
GGTCCATATGGGAATTCTCTGATGGCCACAGAAGCTACAATAAACAGGTTAAACAGCACA
GTGCTGGAGGACTTTGTAGCTGAGAATTATACTGCTCCTCGGATGGTTCTTGCTGCATCT
GGTGTTGAACATGAAGAATTCTTAAAAGTTGCAGAACCTCTTCTGTCTGATTTACCTAAG
GTGGCCACCACTGAAGAACCTAAACCTGTGTATGTGGGAGGAGATTACCGCTGTCAAGCC
GATGCAGAGATGACTCATTTTGCCCTTGCCTTTGAAGTTCCCGGTGGCTGGATGTCTGAA
AAAGAATCAATGACTTTAACAGTTCTTCAGATGCTTATGGGAGGAGGTGGATCTTTCTCA
GCTGGCGGTCCTGGAAAAGGGATGTACTCAAGATTATATCTTCGTGTCTTAAATCAGTAC
CCACAGATTCACGCATTCTCTGCATTCAGCAGCATTTACAATAGCACTGGACTATTTGGA
ATTCAAGGAACTACGAGCTCTGATTTTGGGCCTCAAGCTGTTGATGTAGCAGTTAAAGAG
CTTATTGCAGTAGCAAACCCTAGTGAAGTTGACCAAGTACAGCTAAACCGTGCTAAACAG
GCTACAAAGTCTGCCATTCTGATGAACTTGGAATCCCGGATGGTTGCATCAGAAGATATC
GGCAGACAGCTTTTGACATATGGAGAGAGGAAACCAGTGGAGCATTTCTTGAAAGCCATT
GATGCAGTTTCAGCAAAAGATATTGCTTCCTTTGTGCAGAAGCTTATTTCTTCTCCTCTG
ACCATGGCATCCTATGGAGATGTTCTCTCCCTCCCATCATACGATGCAGTCAGCAGCAGG
TTCCGTTCCAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400000581
PEP Infomation

pacid=37446391 transcript=PGSC0003DMT400000784 locus=PGSC0003DMG400000289 ID=PGSC0003DMT400000784.v4.03 annot-version=v4.03
Sequence

MYRCASSRLSSLKARQGNRVLTRFSSSAAVATKPSGGLFSWITGDTSSSVTPLDFPLNDV
KLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLL
ERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRN
PAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNST
VLEDFVAENYTAPRMVLAASGVEHEEFLKVAEPLLSDLPKVATTEEPKPVYVGGDYRCQA
DAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQY
PQIHAFSAFSSIYNSTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQ
ATKSAILMNLESRMVASEDIGRQLLTYGERKPVEHFLKAIDAVSAKDIASFVQKLISSPL
TMASYGDVLSLPSYDAVSSRFRSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400000784
Transcript Infomation

pacid=37446391 locus=PGSC0003DMG400000289 ID=PGSC0003DMT400000784.v4.03 annot-version=v4.03
Sequence

ATGTACAGATGCGCATCGTCTCGCCTCAGCTCTCTTAAGGCACGTCAAGGCAACAGGGTC
TTGACAAGATTTTCAAGTTCAGCTGCTGTTGCAACCAAGCCATCTGGGGGTCTCTTTAGT
TGGATAACTGGTGATACATCAAGTTCAGTGACTCCCTTGGATTTCCCCCTCAATGATGTT
AAACTCTCGCCACCATTACCTGATTATGTAGAACCTGCAAAGACCCAGATAACGACTCTC
GCCAATGGTCTCAAAGTGGCCTCTGAAGCATCGGTGAACCCTGCTGCCTCAATTGGCCTC
TATGTTGACTGTGGCTCTATTTACGAGACACCAGCTTCATATGGAGCCACACACCTCTTG
GAACGCATGGCCTTCAAAAGCACATTAAACCGGAGTCACTTGCGTATTGTACGAGAAATT
GAAGCAATTGGTGGTAATGTAACAGCTTCAGCCTCACGAGAGCATATGATCTACACTTAT
GATGCTTTGAAAACTTATGTACCACAAATGGTGGAGATGCTTGCTGACTGTGTTAGAAAT
CCTGCATTCCTGGATTGGGAAGTTAAAGAACAGCTTGAGAAGGTTAAAGCTGAGATTAGC
GAGTACTCCAAAAACCCTCAACACTTGCTTTTGGAGGCAGTTCATTCTGCTGGTTATGCT
GGTCCATATGGGAATTCTCTGATGGCCACAGAAGCTACAATAAACAGGTTAAACAGCACA
GTGCTGGAGGACTTTGTAGCTGAGAATTATACTGCTCCTCGGATGGTTCTTGCTGCATCT
GGTGTTGAACATGAAGAATTCTTAAAAGTTGCAGAACCTCTTCTGTCTGATTTACCTAAG
GTGGCCACCACTGAAGAACCTAAACCTGTGTATGTGGGAGGAGATTACCGCTGTCAAGCC
GATGCAGAGATGACTCATTTTGCCCTTGCCTTTGAAGTTCCCGGTGGCTGGATGTCTGAA
AAAGAATCAATGACTTTAACAGTTCTTCAGATGCTTATGGGAGGAGGTGGATCTTTCTCA
GCTGGCGGTCCTGGAAAAGGGATGTACTCAAGATTATATCTTCGTGTCTTAAATCAGTAC
CCACAGATTCACGCATTCTCTGCATTCAGCAGCATTTACAATAGCACTGGACTATTTGGA
ATTCAAGGAACTACGAGCTCTGATTTTGGGCCTCAAGCTGTTGATGTAGCAGTTAAAGAG
CTTATTGCAGTAGCAAACCCTAGTGAAGTTGACCAAGTACAGCTAAACCGTGCTAAACAG
GCTACAAAGTCTGCCATTCTGATGAACTTGGAATCCCGGATGGTTGCATCAGAAGATATC
GGCAGACAGCTTTTGACATATGGAGAGAGGAAACCAGTGGAGCATTTCTTGAAAGCCATT
GATGCAGTTTCAGCAAAAGATATTGCTTCCTTTGTGCAGAAGCTTATTTCTTCTCCTCTG
ACCATGGCATCCTATGGAGATGTTCTCTCCCTCCCATCATACGATGCAGTCAGCAGCAGG
TTCCGTTCCAAATAA