Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000758
CDS Infomation

pacid=37446461 polypeptide=PGSC0003DMP400000559 locus=PGSC0003DMG400000278 ID=PGSC0003DMT400000758.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTCTCAAAATTCTCCTCTGTGGTGATGTACTCGGCCGTCTCAATCAGCTATTC
AAACGCGTTTCTTCGGTGAACAAGGCAGCTGGTCCATTTGATGCTCTTCTTTGCGTAGGC
CAATTTTTTCCTGATTCGGTAGAGGGGATTGAGGAATTCAATGGCTACATTGAGGGGCGT
TCCAAGATTCCGATGCCGACCTATTTCATTGGTGATTATGGTGCAGGGTCCCCAAAAATA
TTGTCAGAAGCATTGAAGGACCCGAGTAACAAAGGGTTTAAGATGGAGGGTTTAAGAGTC
TGTGACAATTTGTACTGGTTGAAAGGAAGTGGGAAGTTTAGCCTTCATGGGTTATCTGTG
GCATACTTATCTGGTAGGCGAACTCCAAGTGGAACTCAATTTGGAACATATAGTCAAGAT
GATGTTGATGCTTTGAGGGCTTTAGCAGAGGATCCAGGAACAGTAGACATCTTTCTGACT
AATGAGTGGCCCAGTGGAGTAACAAATGGAACGACATCAAAAGCTCTTGTAGAAATTTCT
GATTCATCTGGGAGTGATCCCACAGTGTCAGAGTTGGTAACTGAGATTAAGCCTCGGTAT
CATGTTGCAGGAACTGTGGGTGTATACTTTGATCGTGAACCATATGCTAACATTGATGCT
CTACACGCAACTCGCTTTTTGGGCTTAGCTCCTGTTGGAAACAAAGATAAACAGAAATTC
ATTCATGCGATATCCCCCACTCCAGCATCAACAATGTCAAAAACTGAGCTTAGTGCAAAG
CCACCAAACACTACTTTATGTCCATATACAAATGTTGACAAAGCAGCCCCACCCGATGGA
GCGACAAAGAGGCCCGGTGATAGTACTTCTGAGTCACAGTATTGGAGGTATGATGTATCC
AAGAAAAAGCAGAAACATGGAGATGGTGGTGGTGACAGACTCTGCTTTAAATTTGTCTCT
TCTGGCTCTTGTCCAAGAGGAAACCAGTGCCAATTTAGACATGATGAAGAAGCTTCGGAA
CAATACTCAAGAGGTGTGTGTTTTGACTTTCTCAACAAGGGAAAATGTGAAAAAGGTCCT
GATTGCAACTTCAAGCACAGTTTGCAGGAAGAAGGTGATAGATCAGCATCTAGGGCAGCA
AGCTCTAACAGGTCAAAAGAATGCTGGTTTTGTTTGTCAAGCCCGAACGTTGAGTCACAT
CTCATCACTAGTGTCGGAGAATATTACTACTGTGCACTTGCTAAAGGACCTTTAACACCT
GATCATGTGCTAATTATGCCAATTGAACATACACCCAATACATTATCTCTGCCACTGGAA
TGTGAGAAGGAACTGGAACGACTTCAAAGCAGCTTCAAAGCTTACTTCAAAAAGCAAGGG
AAGGAAGCAGTTTTCTTTGAGTGGGTATTTAAGCGAGGAAGTCATGCCAATCTTCAGGTT
GTTCCTATTCCCTCGTCCAGGGCATCTGCGGTTCGAGATATTTTTAACTTGGCTGCTGAC
AAATTGGGATTCAAGCTTACTATGGTTAAAGAAGGAAGACAAGCATTGCGGACACAGTTT
GACAGAAGTTGCAGCTTATTTTATGTTGAAGTTCCTGGAGGTGATATATTGTCACATGTT
ATTGAGGAGAATGAAAAATTCCCAGCTCAATTTGGTCGGGAGGTTTTAGCAGGCTTGTTG
AATATAGCAGATAGAGCTGATTGGCGAAATTGTAAGGTTGATAAAGAAGAAGAAACTAAA
ATGGTTGAGAGATTCAAGAACGGATTTCAAGAATACGATCCAAATCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000559
PEP Infomation

pacid=37446461 transcript=PGSC0003DMT400000758 locus=PGSC0003DMG400000278 ID=PGSC0003DMT400000758.v4.03 annot-version=v4.03
Sequence

MAPLKILLCGDVLGRLNQLFKRVSSVNKAAGPFDALLCVGQFFPDSVEGIEEFNGYIEGR
SKIPMPTYFIGDYGAGSPKILSEALKDPSNKGFKMEGLRVCDNLYWLKGSGKFSLHGLSV
AYLSGRRTPSGTQFGTYSQDDVDALRALAEDPGTVDIFLTNEWPSGVTNGTTSKALVEIS
DSSGSDPTVSELVTEIKPRYHVAGTVGVYFDREPYANIDALHATRFLGLAPVGNKDKQKF
IHAISPTPASTMSKTELSAKPPNTTLCPYTNVDKAAPPDGATKRPGDSTSESQYWRYDVS
KKKQKHGDGGGDRLCFKFVSSGSCPRGNQCQFRHDEEASEQYSRGVCFDFLNKGKCEKGP
DCNFKHSLQEEGDRSASRAASSNRSKECWFCLSSPNVESHLITSVGEYYYCALAKGPLTP
DHVLIMPIEHTPNTLSLPLECEKELERLQSSFKAYFKKQGKEAVFFEWVFKRGSHANLQV
VPIPSSRASAVRDIFNLAADKLGFKLTMVKEGRQALRTQFDRSCSLFYVEVPGGDILSHV
IEENEKFPAQFGREVLAGLLNIADRADWRNCKVDKEEETKMVERFKNGFQEYDPNQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400000758
Transcript Infomation

pacid=37446461 locus=PGSC0003DMG400000278 ID=PGSC0003DMT400000758.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTCTCAAAATTCTCCTCTGTGGTGATGTACTCGGCCGTCTCAATCAGCTATTC
AAACGCGTTTCTTCGGTGAACAAGGCAGCTGGTCCATTTGATGCTCTTCTTTGCGTAGGC
CAATTTTTTCCTGATTCGGTAGAGGGGATTGAGGAATTCAATGGCTACATTGAGGGGCGT
TCCAAGATTCCGATGCCGACCTATTTCATTGGTGATTATGGTGCAGGGTCCCCAAAAATA
TTGTCAGAAGCATTGAAGGACCCGAGTAACAAAGGGTTTAAGATGGAGGGTTTAAGAGTC
TGTGACAATTTGTACTGGTTGAAAGGAAGTGGGAAGTTTAGCCTTCATGGGTTATCTGTG
GCATACTTATCTGGTAGGCGAACTCCAAGTGGAACTCAATTTGGAACATATAGTCAAGAT
GATGTTGATGCTTTGAGGGCTTTAGCAGAGGATCCAGGAACAGTAGACATCTTTCTGACT
AATGAGTGGCCCAGTGGAGTAACAAATGGAACGACATCAAAAGCTCTTGTAGAAATTTCT
GATTCATCTGGGAGTGATCCCACAGTGTCAGAGTTGGTAACTGAGATTAAGCCTCGGTAT
CATGTTGCAGGAACTGTGGGTGTATACTTTGATCGTGAACCATATGCTAACATTGATGCT
CTACACGCAACTCGCTTTTTGGGCTTAGCTCCTGTTGGAAACAAAGATAAACAGAAATTC
ATTCATGCGATATCCCCCACTCCAGCATCAACAATGTCAAAAACTGAGCTTAGTGCAAAG
CCACCAAACACTACTTTATGTCCATATACAAATGTTGACAAAGCAGCCCCACCCGATGGA
GCGACAAAGAGGCCCGGTGATAGTACTTCTGAGTCACAGTATTGGAGGTATGATGTATCC
AAGAAAAAGCAGAAACATGGAGATGGTGGTGGTGACAGACTCTGCTTTAAATTTGTCTCT
TCTGGCTCTTGTCCAAGAGGAAACCAGTGCCAATTTAGACATGATGAAGAAGCTTCGGAA
CAATACTCAAGAGGTGTGTGTTTTGACTTTCTCAACAAGGGAAAATGTGAAAAAGGTCCT
GATTGCAACTTCAAGCACAGTTTGCAGGAAGAAGGTGATAGATCAGCATCTAGGGCAGCA
AGCTCTAACAGGTCAAAAGAATGCTGGTTTTGTTTGTCAAGCCCGAACGTTGAGTCACAT
CTCATCACTAGTGTCGGAGAATATTACTACTGTGCACTTGCTAAAGGACCTTTAACACCT
GATCATGTGCTAATTATGCCAATTGAACATACACCCAATACATTATCTCTGCCACTGGAA
TGTGAGAAGGAACTGGAACGACTTCAAAGCAGCTTCAAAGCTTACTTCAAAAAGCAAGGG
AAGGAAGCAGTTTTCTTTGAGTGGGTATTTAAGCGAGGAAGTCATGCCAATCTTCAGGTT
GTTCCTATTCCCTCGTCCAGGGCATCTGCGGTTCGAGATATTTTTAACTTGGCTGCTGAC
AAATTGGGATTCAAGCTTACTATGGTTAAAGAAGGAAGACAAGCATTGCGGACACAGTTT
GACAGAAGTTGCAGCTTATTTTATGTTGAAGTTCCTGGAGGTGATATATTGTCACATGTT
ATTGAGGAGAATGAAAAATTCCCAGCTCAATTTGGTCGGGAGGTTTTAGCAGGCTTGTTG
AATATAGCAGATAGAGCTGATTGGCGAAATTGTAAGGTTGATAAAGAAGAAGAAACTAAA
ATGGTTGAGAGATTCAAGAACGGATTTCAAGAATACGATCCAAATCAATAG