Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000680
CDS Infomation

pacid=37438411 polypeptide=PGSC0003DMP400000511 locus=PGSC0003DMG400000241 ID=PGSC0003DMT400000680.v4.03 annot-version=v4.03
Sequence

ATGGTACCAGATATGATTTGTGGTCCTTTTGCAGATCTCCTCTCTTCAACTATAGAGTGC
ATCCTTGAAATAGTACTTACTTCCAAGAATGTCTTTATAGAAAAAAAGAGTTTTGCAGAA
CTTTCAGCTTATTTGAATCGTATTGTTCCTTTTCTTAAGGAGATCAATAGGAAGAACATT
ACTGATTCCACACCCTGGGAAAATGTTATACAAATTCTTAACCGACAGACGGTGGATGCA
AGGCAACTTATCTTGGAATGCAGTAAGAAAAACAAGGTCTATCTCTTAATGAATTGTCGG
CTTATTGCAAAGCGCATACAAAATATCACCAGGGAAATTAGCCGTGCATTAAGTTGCATT
CCTTTAGCTTCTCTTGACATTTCTTCGGGTATAAAGGAAGAGATTGTCCAGGTGATTGAT
AGTATGCGTACAGCGGAGTTTAAAACAGCCATAGCTGAAGAAGAGATTTTAGAGAAGATA
GACTCTGGTATACATCAGAGAAATGTTGATCGGTCCTATGCCAACAAGTTGTTAGTTTCA
ATTGCTGAGGCCATTGGAGTTTCAACTGAAAGCTCAGCTTTAAGGAGAGAATTTGAAGAA
TTCAAAGATGAAATAGACAATGCACGGCTAAGGAAAGACCAGGCTGAAGCCTTGCAGATG
GACCAAATAATTGCTCTGCTAGAAAGGGCGGATGCTGCAACATCCCGTCAGGAAAAAGAA
AAGAAGTACTTCATAAAGCGGAAATCATTGGGCAATCAACCTTTGGAACCACTTCTGTCA
TTCTATTGCCCGATCACTCGTGAGGTTATGACTGATCCTGTTGAGACTCCTTCAGGGCAT
ACGTTTGAAAGGTGTGCAATAGAGAAGTGGTTGGCAGAGGGAAATTTGTGTCCCATGACA
TCTACACCTTTGAACAACACAATGATGCGGCCGAATAAAACTTTGCGGCAGTCAATTGAG
GAATGGAAAGACCGTAATACAATGATCACTATAGCTAACATGAAATTGAAACTATCGTCT
GCCGAGGAGGAAGAAGTTCTCAATTGCCTGGAACAGCTAATGGATATTTGTGAGCTGAGA
GAAATTCACCGAGAATGGGTTATTATGGAGGACTATATTCCTATTCTAATCAAGCTACTG
GATTTGAAAAGTAGGGATATCAGGAATCTTGTTCTTGAGGTGCTCTGCGTACTAGCAAAG
GATGATAATGATGCTAAGGAAAGAATTGCTGAAGTTGATAGTGCATTGGAATCTATTGTT
CGCTCGCTTGGACGTCGCATTGGTGAAAGGAAGTCAGCAGTAGCATTGTTACTGGAATTG
TCAAATTGCAAGTCAGTTCAGGAGTCCATTGGGAAGGTTCAAGGTTGCATACTTCTGTTA
GTTACTATGTCAAGCTGTGATGACAACAAAGCTGCCAAAGATGCAAGAGACGTTTTGGAG
AACATTTCATTTTCTGATGACAATGTTATCCTGATGGCCCAGGCCAACTATTTCAAGTAC
TTGTTGCAACGCCTTTCTTCAGGATCCAGTGATGTGAAGCTCCTAATGGCAAAAACCTTA
GGAGAGATGGAGTTGACAGATCATAATAAGTCATCTCTATTTGAGGAGGGAGTTCTAGAT
TCCCTTCTTTCCTCGTTGTCACATGGTGAAGTTGAAGTGAAACAAGCAGGCGTGAAAGCT
CTTCTAAACCTCTCTAGTTTACCAAGGAATGGACAGGAGATGATCAGAAAAGGTGTTATG
CGTCCACTGCTTGATATGTTGTACCGTCACACAGCTTCCCAAAGTCTGCGGGAACTTGTA
GCCGCCACTATTACAAAACTTGCCTTCTCTGCAAGCAGTGAAGCGCTTTCACTGCTTGAT
GCTGATGATGACATTTATGAACTCTTTTCCCTAGTAAACTTGAATGGCCCAGCTGTGCAG
CAAAGCATACTCCAGGCTTTCTGCGCCATGTGCAAGTCTCCATCTGCCGCTAATGTCAAG
ACCAAGCTAGCACAGGTATTCCCCTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400000511
PEP Infomation

pacid=37438411 transcript=PGSC0003DMT400000680 locus=PGSC0003DMG400000241 ID=PGSC0003DMT400000680.v4.03 annot-version=v4.03
Sequence

MVPDMICGPFADLLSSTIECILEIVLTSKNVFIEKKSFAELSAYLNRIVPFLKEINRKNI
TDSTPWENVIQILNRQTVDARQLILECSKKNKVYLLMNCRLIAKRIQNITREISRALSCI
PLASLDISSGIKEEIVQVIDSMRTAEFKTAIAEEEILEKIDSGIHQRNVDRSYANKLLVS
IAEAIGVSTESSALRREFEEFKDEIDNARLRKDQAEALQMDQIIALLERADAATSRQEKE
KKYFIKRKSLGNQPLEPLLSFYCPITREVMTDPVETPSGHTFERCAIEKWLAEGNLCPMT
STPLNNTMMRPNKTLRQSIEEWKDRNTMITIANMKLKLSSAEEEEVLNCLEQLMDICELR
EIHREWVIMEDYIPILIKLLDLKSRDIRNLVLEVLCVLAKDDNDAKERIAEVDSALESIV
RSLGRRIGERKSAVALLLELSNCKSVQESIGKVQGCILLLVTMSSCDDNKAAKDARDVLE
NISFSDDNVILMAQANYFKYLLQRLSSGSSDVKLLMAKTLGEMELTDHNKSSLFEEGVLD
SLLSSLSHGEVEVKQAGVKALLNLSSLPRNGQEMIRKGVMRPLLDMLYRHTASQSLRELV
AATITKLAFSASSEALSLLDADDDIYELFSLVNLNGPAVQQSILQAFCAMCKSPSAANVK
TKLAQVFPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400000680
Transcript Infomation

pacid=37438411 locus=PGSC0003DMG400000241 ID=PGSC0003DMT400000680.v4.03 annot-version=v4.03
Sequence

ATGGTACCAGATATGATTTGTGGTCCTTTTGCAGATCTCCTCTCTTCAACTATAGAGTGC
ATCCTTGAAATAGTACTTACTTCCAAGAATGTCTTTATAGAAAAAAAGAGTTTTGCAGAA
CTTTCAGCTTATTTGAATCGTATTGTTCCTTTTCTTAAGGAGATCAATAGGAAGAACATT
ACTGATTCCACACCCTGGGAAAATGTTATACAAATTCTTAACCGACAGACGGTGGATGCA
AGGCAACTTATCTTGGAATGCAGTAAGAAAAACAAGGTCTATCTCTTAATGAATTGTCGG
CTTATTGCAAAGCGCATACAAAATATCACCAGGGAAATTAGCCGTGCATTAAGTTGCATT
CCTTTAGCTTCTCTTGACATTTCTTCGGGTATAAAGGAAGAGATTGTCCAGGTGATTGAT
AGTATGCGTACAGCGGAGTTTAAAACAGCCATAGCTGAAGAAGAGATTTTAGAGAAGATA
GACTCTGGTATACATCAGAGAAATGTTGATCGGTCCTATGCCAACAAGTTGTTAGTTTCA
ATTGCTGAGGCCATTGGAGTTTCAACTGAAAGCTCAGCTTTAAGGAGAGAATTTGAAGAA
TTCAAAGATGAAATAGACAATGCACGGCTAAGGAAAGACCAGGCTGAAGCCTTGCAGATG
GACCAAATAATTGCTCTGCTAGAAAGGGCGGATGCTGCAACATCCCGTCAGGAAAAAGAA
AAGAAGTACTTCATAAAGCGGAAATCATTGGGCAATCAACCTTTGGAACCACTTCTGTCA
TTCTATTGCCCGATCACTCGTGAGGTTATGACTGATCCTGTTGAGACTCCTTCAGGGCAT
ACGTTTGAAAGGTGTGCAATAGAGAAGTGGTTGGCAGAGGGAAATTTGTGTCCCATGACA
TCTACACCTTTGAACAACACAATGATGCGGCCGAATAAAACTTTGCGGCAGTCAATTGAG
GAATGGAAAGACCGTAATACAATGATCACTATAGCTAACATGAAATTGAAACTATCGTCT
GCCGAGGAGGAAGAAGTTCTCAATTGCCTGGAACAGCTAATGGATATTTGTGAGCTGAGA
GAAATTCACCGAGAATGGGTTATTATGGAGGACTATATTCCTATTCTAATCAAGCTACTG
GATTTGAAAAGTAGGGATATCAGGAATCTTGTTCTTGAGGTGCTCTGCGTACTAGCAAAG
GATGATAATGATGCTAAGGAAAGAATTGCTGAAGTTGATAGTGCATTGGAATCTATTGTT
CGCTCGCTTGGACGTCGCATTGGTGAAAGGAAGTCAGCAGTAGCATTGTTACTGGAATTG
TCAAATTGCAAGTCAGTTCAGGAGTCCATTGGGAAGGTTCAAGGTTGCATACTTCTGTTA
GTTACTATGTCAAGCTGTGATGACAACAAAGCTGCCAAAGATGCAAGAGACGTTTTGGAG
AACATTTCATTTTCTGATGACAATGTTATCCTGATGGCCCAGGCCAACTATTTCAAGTAC
TTGTTGCAACGCCTTTCTTCAGGATCCAGTGATGTGAAGCTCCTAATGGCAAAAACCTTA
GGAGAGATGGAGTTGACAGATCATAATAAGTCATCTCTATTTGAGGAGGGAGTTCTAGAT
TCCCTTCTTTCCTCGTTGTCACATGGTGAAGTTGAAGTGAAACAAGCAGGCGTGAAAGCT
CTTCTAAACCTCTCTAGTTTACCAAGGAATGGACAGGAGATGATCAGAAAAGGTGTTATG
CGTCCACTGCTTGATATGTTGTACCGTCACACAGCTTCCCAAAGTCTGCGGGAACTTGTA
GCCGCCACTATTACAAAACTTGCCTTCTCTGCAAGCAGTGAAGCGCTTTCACTGCTTGAT
GCTGATGATGACATTTATGAACTCTTTTCCCTAGTAAACTTGAATGGCCCAGCTGTGCAG
CAAAGCATACTCCAGGCTTTCTGCGCCATGTGCAAGTCTCCATCTGCCGCTAATGTCAAG
ACCAAGCTAGCACAGGTATTCCCCTCTTAG