Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000652
CDS Infomation

pacid=37437655 polypeptide=PGSC0003DMP400000489 locus=PGSC0003DMG400000232 ID=PGSC0003DMT400000652.v4.03 annot-version=v4.03
Sequence

ATGGTTACTGGGAATATGTTGTGGAGTGGTGAGGATAAAGCTACGGTGGCGGCTGTTTTA
GGAAAGGAAGCTTTTGAATATTTGATGTCTGGCTCTGTTTCAGCAGAATGTTCTTTAATG
GCAATAGGGAATGATCAGAATTTGCAGAATAAGCTTTCAGATCTCGTGGAATGCCCAAAC
GCCGCTAACTTTAGCTGGAATTATGCCATCTTTTGGCAAATTTCGCGGTCTAAGTCAGGG
GAATTGGTTCTAGGGTGGGGGGATGGGTGTTGCAGAGAGCCTAAGGAAGGAGAGGAGCGT
GAAGTTAAAAGGATTTTCAATCTACGCCTCGACGATGAGGGTCAACAAAGGATGAGGAAG
AGGGTACTTCAAAAGTTGCATATGTTATTTGGTGGAACAGATGAAGATAACTATGCTTTT
GGATTAGATAGAGTTACTGATACTGAAATGTTCTTCCTTGCCTCGATGTATTTTTCGTTC
CCTCGAGGAGAGGGAGGTCCGGGGAAGTGTTTTGGATCAGGTAAGCATTTGTGGTTATCA
GATGCATTGACATCTAATCTAGAGTATTGTGCTAGATCTTTCTTAGCTAAGTCTGCTGGT
ATGCAAACTATTGTTTTGATTCCAACTGATGTAGGAGTTGTGGAATTGGGGTCAGTGAGA
TCAATTCCGGAAAGTTTGGAGCTATTACAGAATATAAAATCTTGCTTCTCGTCGTTTTTG
TCACTTGTTAGGGATAAGCAAGCAGCAGGTATAGCAGTTGTACCTGAGAAAAAAGAGGGA
AACAATCCCCGCCTTTCCAACTCAGGCGCTGTTACTGAACGAACAGACGGAAATCCTAAG
CTATTTGGGCATGATTTGAATTCGGGCACTCACTTTAGGGAAAAACTTGCTGTTAGGAAA
GCGGAGGAGAGGCCATGGGAAAATGGTAACAGAATGCCATTTGTGAACGCACGGAATGGT
TTAAATCCTGCTTCTTGGGCTCAATTCAGTAATGTGAAGCCGGGAAAACCTGTGGAGCTC
TATGGTCCTCCAACCCCAGGACACAACCTAATCAATGGTGGAAGGGAAGAATTCCGCTTG
AACAACTTTCAACATCAAAAGCCAGCTGCTAGAATGCAAATTGATTTCACCGGAGCAACC
TCGAGACCCATTGTTTCGCCAGCACACACTGTTGAGTCTGAACATTCAGATGTTGAAGTT
TCGTGCAAGGAAGACCGTGGAGGCCCAGTGGATGAAAAGAGGCCTCGAAAACGTGGAAGA
AAGCCAGCCAACGGAAGGGAAGAGCCTCTCAATCATGTAGAGGCAGAGAGGCAGCGGAGG
GAAAAATTGAACCAGCGGTTCTATGCCTTACGAGCTGTTGTTCCGAATATCTCCAAGATG
GACAAAGCTTCCCTCTTAGGGGATGCCATTGCTTACATAACTGAGCTGCAGAAAAAACTT
AGAGATATGGAATCTGAGAGGGAAAACACTTCAAGGGATGCAATCGCTTCAGAAGACAGC
CCGAGTTCAGAGATTCAAATCCGAGGACCCAACATCAACATAGAAGCTGCCAATGATGAA
GTCATTGTAAGGGTGAGCTGCTCAATGGAAACCCATCCACTATCTCGAGTCATCCAAATA
TTCAAAGAGGCGCAAATCAACGTTGTTGAATCAAAACTTTCCGCGGGGAATGGTACTGTG
TATCACACATTTGTCCTCAAGTCTAGTGGATCTGAACAGCTGACTAAGGAAAAGTTGCTG
GCTGCATTTTCCAGTGAATCAAACTCGTTAAGGCAACTTTCACCGGTAGGGCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000489
PEP Infomation

pacid=37437655 transcript=PGSC0003DMT400000652 locus=PGSC0003DMG400000232 ID=PGSC0003DMT400000652.v4.03 annot-version=v4.03
Sequence

MVTGNMLWSGEDKATVAAVLGKEAFEYLMSGSVSAECSLMAIGNDQNLQNKLSDLVECPN
AANFSWNYAIFWQISRSKSGELVLGWGDGCCREPKEGEEREVKRIFNLRLDDEGQQRMRK
RVLQKLHMLFGGTDEDNYAFGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFGSGKHLWLS
DALTSNLEYCARSFLAKSAGMQTIVLIPTDVGVVELGSVRSIPESLELLQNIKSCFSSFL
SLVRDKQAAGIAVVPEKKEGNNPRLSNSGAVTERTDGNPKLFGHDLNSGTHFREKLAVRK
AEERPWENGNRMPFVNARNGLNPASWAQFSNVKPGKPVELYGPPTPGHNLINGGREEFRL
NNFQHQKPAARMQIDFTGATSRPIVSPAHTVESEHSDVEVSCKEDRGGPVDEKRPRKRGR
KPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITELQKKL
RDMESERENTSRDAIASEDSPSSEIQIRGPNINIEAANDEVIVRVSCSMETHPLSRVIQI
FKEAQINVVESKLSAGNGTVYHTFVLKSSGSEQLTKEKLLAAFSSESNSLRQLSPVGQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400000652
Transcript Infomation

pacid=37437655 locus=PGSC0003DMG400000232 ID=PGSC0003DMT400000652.v4.03 annot-version=v4.03
Sequence

ATGGTTACTGGGAATATGTTGTGGAGTGGTGAGGATAAAGCTACGGTGGCGGCTGTTTTA
GGAAAGGAAGCTTTTGAATATTTGATGTCTGGCTCTGTTTCAGCAGAATGTTCTTTAATG
GCAATAGGGAATGATCAGAATTTGCAGAATAAGCTTTCAGATCTCGTGGAATGCCCAAAC
GCCGCTAACTTTAGCTGGAATTATGCCATCTTTTGGCAAATTTCGCGGTCTAAGTCAGGG
GAATTGGTTCTAGGGTGGGGGGATGGGTGTTGCAGAGAGCCTAAGGAAGGAGAGGAGCGT
GAAGTTAAAAGGATTTTCAATCTACGCCTCGACGATGAGGGTCAACAAAGGATGAGGAAG
AGGGTACTTCAAAAGTTGCATATGTTATTTGGTGGAACAGATGAAGATAACTATGCTTTT
GGATTAGATAGAGTTACTGATACTGAAATGTTCTTCCTTGCCTCGATGTATTTTTCGTTC
CCTCGAGGAGAGGGAGGTCCGGGGAAGTGTTTTGGATCAGGTAAGCATTTGTGGTTATCA
GATGCATTGACATCTAATCTAGAGTATTGTGCTAGATCTTTCTTAGCTAAGTCTGCTGGT
ATGCAAACTATTGTTTTGATTCCAACTGATGTAGGAGTTGTGGAATTGGGGTCAGTGAGA
TCAATTCCGGAAAGTTTGGAGCTATTACAGAATATAAAATCTTGCTTCTCGTCGTTTTTG
TCACTTGTTAGGGATAAGCAAGCAGCAGGTATAGCAGTTGTACCTGAGAAAAAAGAGGGA
AACAATCCCCGCCTTTCCAACTCAGGCGCTGTTACTGAACGAACAGACGGAAATCCTAAG
CTATTTGGGCATGATTTGAATTCGGGCACTCACTTTAGGGAAAAACTTGCTGTTAGGAAA
GCGGAGGAGAGGCCATGGGAAAATGGTAACAGAATGCCATTTGTGAACGCACGGAATGGT
TTAAATCCTGCTTCTTGGGCTCAATTCAGTAATGTGAAGCCGGGAAAACCTGTGGAGCTC
TATGGTCCTCCAACCCCAGGACACAACCTAATCAATGGTGGAAGGGAAGAATTCCGCTTG
AACAACTTTCAACATCAAAAGCCAGCTGCTAGAATGCAAATTGATTTCACCGGAGCAACC
TCGAGACCCATTGTTTCGCCAGCACACACTGTTGAGTCTGAACATTCAGATGTTGAAGTT
TCGTGCAAGGAAGACCGTGGAGGCCCAGTGGATGAAAAGAGGCCTCGAAAACGTGGAAGA
AAGCCAGCCAACGGAAGGGAAGAGCCTCTCAATCATGTAGAGGCAGAGAGGCAGCGGAGG
GAAAAATTGAACCAGCGGTTCTATGCCTTACGAGCTGTTGTTCCGAATATCTCCAAGATG
GACAAAGCTTCCCTCTTAGGGGATGCCATTGCTTACATAACTGAGCTGCAGAAAAAACTT
AGAGATATGGAATCTGAGAGGGAAAACACTTCAAGGGATGCAATCGCTTCAGAAGACAGC
CCGAGTTCAGAGATTCAAATCCGAGGACCCAACATCAACATAGAAGCTGCCAATGATGAA
GTCATTGTAAGGGTGAGCTGCTCAATGGAAACCCATCCACTATCTCGAGTCATCCAAATA
TTCAAAGAGGCGCAAATCAACGTTGTTGAATCAAAACTTTCCGCGGGGAATGGTACTGTG
TATCACACATTTGTCCTCAAGTCTAGTGGATCTGAACAGCTGACTAAGGAAAAGTTGCTG
GCTGCATTTTCCAGTGAATCAAACTCGTTAAGGCAACTTTCACCGGTAGGGCAATAG