Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000647
CDS Infomation

pacid=37437955 polypeptide=PGSC0003DMP400000484 locus=PGSC0003DMG400000228 ID=PGSC0003DMT400000647.v4.03 annot-version=v4.03
Sequence

ATGAGCTTGCTGACAATATCAAGCACTTCTTCAATTCTCTACCCTCTTCAAATTTCTTCA
CCCAAATTCAGCATCTCAAAATGGAGAAAAAGAACCCCTTTACCACGCAATTTCAAGATT
TGCAGTCCCATCTCGCCATTCTCCAACCCTTCAAGATTCCAAATTTCAGCTCAAGTCGGC
CGAAGAACCAAACGTCAGAACTATTTGAGGAAAAAGCTCACTCAGAAGCAACAGGTAATT
GAAAACCCCATTACTCACAACCCAAGTTCTGAAAGTTTTCAATTTGAGTCTCAACATGGT
GATGAAAAAAGTAAGAATCTTGTTTCTGATACTGGGGTGGTTGGTAATACTGAAGAATCA
GTGAAAGAATTGAAAACAAAGGCTTTGGGGGAGTCTGTTTTGTGGAATAAATTGGAGAGC
TGGGTTGAGCAGTATAAGAAAGATACAGAGTTTTGGGGTATTGGTACTGGTCCTATCTTT
ACTGTTTTTCAAGATTCTGAGGGTAAAGTCGAAAGGGTAGTTGTAAGTGAGGATGAAATT
TTGAAAAGAAGCAGAATTGATCCGACATTGTATCGGAACGCTACGATTGAGGAACATGAG
GATGTAAAAGCAAAAATTTCACTTGCGGAGGTTTTAGCTAGGGAAATGGAAAGTGGCAAA
AATTTGCTTCCTAAGAATAGTTCAGTGGCTAAATTTTTAGTCTCTGGAGAGATGTCCAAT
ACTGTAGTTTCTGGAGAGATGCACAATACTGTCAATAGGCTCAGTACGTTTACTCTAAAT
CCAAATCTATCTAAAAAGTTGCCTAGAATTGGATTGGTGGTGTTTTGTGGTTTCTTTTTA
ATTTGGACGGTGAAGAAAATGTTTACCGCTGGAAATGATGGAGAAGAAGAGTACTCAAGT
TTGGAGAAGGAAATGCTGAGGAGGAAAATGAAAGCTAGAAAGGAGAAGGAGAAGACCGTG
AAAGGTGAGGTGGAAGTTATCCAGGGTACCATAGAGCCAGATAACATGTCTCTCGAAAGG
CCTTGGCTTGATAAGCAAGAAATTATGAGCAGCATTAAGAAAGCAAGGGAATTTGATGGT
AAATTAGCATTACCGGAGCAGTTTCAGAATCAGCAGTTTGAGAATGCCGAATTCTATGAA
GAGATTGAGGAAATCAGAAAGATGGCAAGGCATGCACGAGAACAGGAAAAAGGAAATTCT
CTTCAAGCTGATAATGGAGGAGAATCAGGAGATTATCCGGCCTCAACCGAACTCTCCAAT
GAAAAGGTAGTTGCTGAACAGAGTTTGTTTGAGGATATTAATGAGCAACATGATCTCAGT
GGATTTGTTGGGCCAACAACTTCCTCTGACAATAATGGAGTCCATACCAGTTCATCTTCA
CTGGTGAATCATGCAGTGCAGACCTCAAACAGCAATTTAGAACCTCCAGATGATATCATA
AGTTCTATGGCTGATTCACGTGAATCAAAGCATGACGTAATCTCCACTTATGGAACTGAA
AAACCTATTATAATGTCTGGACAATCAAGCAAGCCAAGTGAAATCTCTGTGACATCAAAA
TCAAAAATCATTCTGTCAGTTAAGGAAGCTAGGGAATACCTCTCGAAGAAAAATGAGAAA
CTGAAAACAAAGCAAGAAAGGACCCCTGAATGTGATCCAGAGGTTGAAAATGTATCAATA
CCACTTATGGAAGAAGAGAGCATTGGTGATTTGAACCAGCTGTCTGATAAAGCAGGAAAA
GAATTTGACCGGTTGCCTTTATGTGGAACATCTGATTTTGCTTATGAAGATTCTAGTTTC
AAACAAGAAGAATTTCTTCCAACATGCAACAATGCTGTAGCTGCACTGAACAAAGGGAAG
AGCTATCAAAGTCTGAGTTCAGATGATGATGAAAACAGCAGATATGAAGAGCTTAAACCA
CTTGATTTGTCATCACCTGAACAAGAAGCAACTGTTGGTGATTTGAGATCACAACTTGAT
GAAATCAAAATCTTTCAGCGGTCGAGTCCACTTGAAACCTCGGATTTGACATCGTCTTCA
AATCATTGTCTAGAGAATAATAAAGCATTTCCAGCCAATGACATTCCTGAACATGTTGAT
AAAGTAGCACCACCTACTGTAATACCTGAAACTCACTCTCATCAAGAAGATAACGGCAGA
ACTGCAGAACTGGAACCATCACCAAATAATGGAAGCTGGTTGGAAAAGAACTTCCATGAA
TTTGAACCAGTCATTAAGAAGATTCAGATGGGATTTAGGGATAATTACCATGTGGCAAAG
GAGAAATCTGATGAGGAGCTGAATCTGAAAACTCAGATGTTTCATCTCGAGTCTAATGAG
AATGTCACTGAGCTTGAGTGGATGAAAGATGAAAGACTTAATGAAATTGTTTTTAAAGTT
AGAGAAAATGAGCTTGCTGGTAGAGAGCCATTTTATCAGATGGATGATGAAGATAAACTT
GCCTTCTTCAGTGGCCTTGAGAAGAAAGTTGATCAAGAGAATAAACAACTACAGAATTTG
CACGAGTGGCTCCACTCAAACATTGAAAACCTTGATTATGGAGCAGATGGCATCAGTTTA
TATGATCCACCCGAGAAAATTATACCTCGCTGGAAAGGTCCACCACTGGAAGGAAGTTCA
GAGTTTCTCAATTACTTTGTAGAACAGCGAAAGGTAGTTGCAGAAAGCGTAAAAAGTTCA
AATCTCATAAAGAAAGAAAGACAAGACTTGCCACAAGGATTGCAAGAATCCCCATCGAGC
AGTAAAATTGATTCAACTTCAGCTATATCTATTCAAGATGCAAAGACAAAAACTCCCAGG
ACCATCATTGAAAGTAGTGATGGTTCCATCAAGGCTGGCAAGAAATCTGGTAAAGAGTAC
TGGCAGAATACAAAGAAATGGTCCCAAGGGTTCTTGGAATCCTACAATGCAGAGACAGAC
CCGGAAATAAAATCTGTAATGAAGGATGTAGGAAAGGACTTGGACAAGTGGATTACTGAA
AGAGAAATAAAGGAAGCTGCCGATCTGATGGACAACTTACCTGAGAAGGGAAAGAAATTA
ATCAAAGAGAAACTTGATAAGGTGAAAAGAGAAATGGAACTGTTTGGACCTCAGGCAGTA
GTGAGCAAATATCGTGAATATGCAGATGAAAAGGAAGAGGACTACTTATGGTGGCTTGAT
CTACCCCGTGTATTGTGTATTGAATTGTACACTGAGGAAGAAGGAGAGATGAAGGCAGGA
TTCTATTCACTAGAGATGGCCGCTGATCTGGAGTTGGATCCCAAGCAGTATCACGTAATT
GCTTTTGAGGATGCTGGTGACTGTAAAAACCTTTGCTATATAATACAGGCTCATATGGAA
ATGCTCGGCAATGGGAATGCCTTTGTTGTGGCACGACCTCCTAAGGATGCTTATCGGGAC
ACCAAAACAAATGGTTTTAATGTGACAGTTATCAAGAAAGGGCAGTTGCAGCTCAATGTG
GACCAGTCATTGGAAGAGGTGGAGGAAGCTATCACGGATATTGGGAGTAAGATATACCAT
GACAAAATCATGCGTGAACGATCTTTGGATGTAACTACAGTAATGAAAGGTGTATTTGGT
ACTGGAAAACCTACCAAAAAGAGGAGGAGGTCACGGAAGAAGCTAAAAAAGCCCACTTCG
AAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000484
PEP Infomation

pacid=37437955 transcript=PGSC0003DMT400000647 locus=PGSC0003DMG400000228 ID=PGSC0003DMT400000647.v4.03 annot-version=v4.03
Sequence

MSLLTISSTSSILYPLQISSPKFSISKWRKRTPLPRNFKICSPISPFSNPSRFQISAQVG
RRTKRQNYLRKKLTQKQQVIENPITHNPSSESFQFESQHGDEKSKNLVSDTGVVGNTEES
VKELKTKALGESVLWNKLESWVEQYKKDTEFWGIGTGPIFTVFQDSEGKVERVVVSEDEI
LKRSRIDPTLYRNATIEEHEDVKAKISLAEVLAREMESGKNLLPKNSSVAKFLVSGEMSN
TVVSGEMHNTVNRLSTFTLNPNLSKKLPRIGLVVFCGFFLIWTVKKMFTAGNDGEEEYSS
LEKEMLRRKMKARKEKEKTVKGEVEVIQGTIEPDNMSLERPWLDKQEIMSSIKKAREFDG
KLALPEQFQNQQFENAEFYEEIEEIRKMARHAREQEKGNSLQADNGGESGDYPASTELSN
EKVVAEQSLFEDINEQHDLSGFVGPTTSSDNNGVHTSSSSLVNHAVQTSNSNLEPPDDII
SSMADSRESKHDVISTYGTEKPIIMSGQSSKPSEISVTSKSKIILSVKEAREYLSKKNEK
LKTKQERTPECDPEVENVSIPLMEEESIGDLNQLSDKAGKEFDRLPLCGTSDFAYEDSSF
KQEEFLPTCNNAVAALNKGKSYQSLSSDDDENSRYEELKPLDLSSPEQEATVGDLRSQLD
EIKIFQRSSPLETSDLTSSSNHCLENNKAFPANDIPEHVDKVAPPTVIPETHSHQEDNGR
TAELEPSPNNGSWLEKNFHEFEPVIKKIQMGFRDNYHVAKEKSDEELNLKTQMFHLESNE
NVTELEWMKDERLNEIVFKVRENELAGREPFYQMDDEDKLAFFSGLEKKVDQENKQLQNL
HEWLHSNIENLDYGADGISLYDPPEKIIPRWKGPPLEGSSEFLNYFVEQRKVVAESVKSS
NLIKKERQDLPQGLQESPSSSKIDSTSAISIQDAKTKTPRTIIESSDGSIKAGKKSGKEY
WQNTKKWSQGFLESYNAETDPEIKSVMKDVGKDLDKWITEREIKEAADLMDNLPEKGKKL
IKEKLDKVKREMELFGPQAVVSKYREYADEKEEDYLWWLDLPRVLCIELYTEEEGEMKAG
FYSLEMAADLELDPKQYHVIAFEDAGDCKNLCYIIQAHMEMLGNGNAFVVARPPKDAYRD
TKTNGFNVTVIKKGQLQLNVDQSLEEVEEAITDIGSKIYHDKIMRERSLDVTTVMKGVFG
TGKPTKKRRRSRKKLKKPTSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400000647
Transcript Infomation

pacid=37437955 locus=PGSC0003DMG400000228 ID=PGSC0003DMT400000647.v4.03 annot-version=v4.03
Sequence

ATGAGCTTGCTGACAATATCAAGCACTTCTTCAATTCTCTACCCTCTTCAAATTTCTTCA
CCCAAATTCAGCATCTCAAAATGGAGAAAAAGAACCCCTTTACCACGCAATTTCAAGATT
TGCAGTCCCATCTCGCCATTCTCCAACCCTTCAAGATTCCAAATTTCAGCTCAAGTCGGC
CGAAGAACCAAACGTCAGAACTATTTGAGGAAAAAGCTCACTCAGAAGCAACAGGTAATT
GAAAACCCCATTACTCACAACCCAAGTTCTGAAAGTTTTCAATTTGAGTCTCAACATGGT
GATGAAAAAAGTAAGAATCTTGTTTCTGATACTGGGGTGGTTGGTAATACTGAAGAATCA
GTGAAAGAATTGAAAACAAAGGCTTTGGGGGAGTCTGTTTTGTGGAATAAATTGGAGAGC
TGGGTTGAGCAGTATAAGAAAGATACAGAGTTTTGGGGTATTGGTACTGGTCCTATCTTT
ACTGTTTTTCAAGATTCTGAGGGTAAAGTCGAAAGGGTAGTTGTAAGTGAGGATGAAATT
TTGAAAAGAAGCAGAATTGATCCGACATTGTATCGGAACGCTACGATTGAGGAACATGAG
GATGTAAAAGCAAAAATTTCACTTGCGGAGGTTTTAGCTAGGGAAATGGAAAGTGGCAAA
AATTTGCTTCCTAAGAATAGTTCAGTGGCTAAATTTTTAGTCTCTGGAGAGATGTCCAAT
ACTGTAGTTTCTGGAGAGATGCACAATACTGTCAATAGGCTCAGTACGTTTACTCTAAAT
CCAAATCTATCTAAAAAGTTGCCTAGAATTGGATTGGTGGTGTTTTGTGGTTTCTTTTTA
ATTTGGACGGTGAAGAAAATGTTTACCGCTGGAAATGATGGAGAAGAAGAGTACTCAAGT
TTGGAGAAGGAAATGCTGAGGAGGAAAATGAAAGCTAGAAAGGAGAAGGAGAAGACCGTG
AAAGGTGAGGTGGAAGTTATCCAGGGTACCATAGAGCCAGATAACATGTCTCTCGAAAGG
CCTTGGCTTGATAAGCAAGAAATTATGAGCAGCATTAAGAAAGCAAGGGAATTTGATGGT
AAATTAGCATTACCGGAGCAGTTTCAGAATCAGCAGTTTGAGAATGCCGAATTCTATGAA
GAGATTGAGGAAATCAGAAAGATGGCAAGGCATGCACGAGAACAGGAAAAAGGAAATTCT
CTTCAAGCTGATAATGGAGGAGAATCAGGAGATTATCCGGCCTCAACCGAACTCTCCAAT
GAAAAGGTAGTTGCTGAACAGAGTTTGTTTGAGGATATTAATGAGCAACATGATCTCAGT
GGATTTGTTGGGCCAACAACTTCCTCTGACAATAATGGAGTCCATACCAGTTCATCTTCA
CTGGTGAATCATGCAGTGCAGACCTCAAACAGCAATTTAGAACCTCCAGATGATATCATA
AGTTCTATGGCTGATTCACGTGAATCAAAGCATGACGTAATCTCCACTTATGGAACTGAA
AAACCTATTATAATGTCTGGACAATCAAGCAAGCCAAGTGAAATCTCTGTGACATCAAAA
TCAAAAATCATTCTGTCAGTTAAGGAAGCTAGGGAATACCTCTCGAAGAAAAATGAGAAA
CTGAAAACAAAGCAAGAAAGGACCCCTGAATGTGATCCAGAGGTTGAAAATGTATCAATA
CCACTTATGGAAGAAGAGAGCATTGGTGATTTGAACCAGCTGTCTGATAAAGCAGGAAAA
GAATTTGACCGGTTGCCTTTATGTGGAACATCTGATTTTGCTTATGAAGATTCTAGTTTC
AAACAAGAAGAATTTCTTCCAACATGCAACAATGCTGTAGCTGCACTGAACAAAGGGAAG
AGCTATCAAAGTCTGAGTTCAGATGATGATGAAAACAGCAGATATGAAGAGCTTAAACCA
CTTGATTTGTCATCACCTGAACAAGAAGCAACTGTTGGTGATTTGAGATCACAACTTGAT
GAAATCAAAATCTTTCAGCGGTCGAGTCCACTTGAAACCTCGGATTTGACATCGTCTTCA
AATCATTGTCTAGAGAATAATAAAGCATTTCCAGCCAATGACATTCCTGAACATGTTGAT
AAAGTAGCACCACCTACTGTAATACCTGAAACTCACTCTCATCAAGAAGATAACGGCAGA
ACTGCAGAACTGGAACCATCACCAAATAATGGAAGCTGGTTGGAAAAGAACTTCCATGAA
TTTGAACCAGTCATTAAGAAGATTCAGATGGGATTTAGGGATAATTACCATGTGGCAAAG
GAGAAATCTGATGAGGAGCTGAATCTGAAAACTCAGATGTTTCATCTCGAGTCTAATGAG
AATGTCACTGAGCTTGAGTGGATGAAAGATGAAAGACTTAATGAAATTGTTTTTAAAGTT
AGAGAAAATGAGCTTGCTGGTAGAGAGCCATTTTATCAGATGGATGATGAAGATAAACTT
GCCTTCTTCAGTGGCCTTGAGAAGAAAGTTGATCAAGAGAATAAACAACTACAGAATTTG
CACGAGTGGCTCCACTCAAACATTGAAAACCTTGATTATGGAGCAGATGGCATCAGTTTA
TATGATCCACCCGAGAAAATTATACCTCGCTGGAAAGGTCCACCACTGGAAGGAAGTTCA
GAGTTTCTCAATTACTTTGTAGAACAGCGAAAGGTAGTTGCAGAAAGCGTAAAAAGTTCA
AATCTCATAAAGAAAGAAAGACAAGACTTGCCACAAGGATTGCAAGAATCCCCATCGAGC
AGTAAAATTGATTCAACTTCAGCTATATCTATTCAAGATGCAAAGACAAAAACTCCCAGG
ACCATCATTGAAAGTAGTGATGGTTCCATCAAGGCTGGCAAGAAATCTGGTAAAGAGTAC
TGGCAGAATACAAAGAAATGGTCCCAAGGGTTCTTGGAATCCTACAATGCAGAGACAGAC
CCGGAAATAAAATCTGTAATGAAGGATGTAGGAAAGGACTTGGACAAGTGGATTACTGAA
AGAGAAATAAAGGAAGCTGCCGATCTGATGGACAACTTACCTGAGAAGGGAAAGAAATTA
ATCAAAGAGAAACTTGATAAGGTGAAAAGAGAAATGGAACTGTTTGGACCTCAGGCAGTA
GTGAGCAAATATCGTGAATATGCAGATGAAAAGGAAGAGGACTACTTATGGTGGCTTGAT
CTACCCCGTGTATTGTGTATTGAATTGTACACTGAGGAAGAAGGAGAGATGAAGGCAGGA
TTCTATTCACTAGAGATGGCCGCTGATCTGGAGTTGGATCCCAAGCAGTATCACGTAATT
GCTTTTGAGGATGCTGGTGACTGTAAAAACCTTTGCTATATAATACAGGCTCATATGGAA
ATGCTCGGCAATGGGAATGCCTTTGTTGTGGCACGACCTCCTAAGGATGCTTATCGGGAC
ACCAAAACAAATGGTTTTAATGTGACAGTTATCAAGAAAGGGCAGTTGCAGCTCAATGTG
GACCAGTCATTGGAAGAGGTGGAGGAAGCTATCACGGATATTGGGAGTAAGATATACCAT
GACAAAATCATGCGTGAACGATCTTTGGATGTAACTACAGTAATGAAAGGTGTATTTGGT
ACTGGAAAACCTACCAAAAAGAGGAGGAGGTCACGGAAGAAGCTAAAAAAGCCCACTTCG
AAATAG