Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000645
CDS Infomation

pacid=37439342 polypeptide=PGSC0003DMP400000482 locus=PGSC0003DMG400000227 ID=PGSC0003DMT400000645.v4.03 annot-version=v4.03
Sequence

ATGCCAGTCGTAAACTTGACACTGATAGATCTTCCCGGACTTACAAAAGTAGCAGTTGAG
GGACAATCTGATAGCATTGTTGCGGATATTGAAAACATGGTTCGCGCTTATATTGAGAAG
CCAAATTGCATTATTCTTGCTGTTTCTCCTGCCAATCAAGATCTTGCAACATCAGATGCT
ATTAAGATTTCTCGCGAAGTAGATCCAAAAGGGGAAAGGACATTTGGTGTTCTGACTAAG
ATTGATCTTATGGATAAGGGTACTGATGCTGTTGATATGTTGGAAGGAAGAGCATATAAA
CTACAATTTCCATGGATAGGTGTTGTCAACCGTTCTCAAGCGGATATTAATAAAAATGTT
GACATGATTGCTGCCAGGCGTAGAGAAAAAGAGTATTTTTCTAGCACCCCCGAGTACAGG
CATCTTGCCAGCAAGATGGGGTCAGAACATCTTGGGAAAGTTATGTCAAAACACTTAGAG
GCTGTTATCAAGTCAAGAATTCCAGGTCTCCAGTCTCTTATCAACAAGACCATCATTGAC
CTAGAAAGTGAATTGAGCCGTCTTGGGAAGCCCATTGCAACTGATGCTGGAGGAAAATTG
TACATGGTTATGGAAGTTTGTCGTACTTTTGATGGAATCTTTAAAGAACATCTTGATGGA
GTTCGACCAGGTGGAGATAAAATATATAATGTCTTTGATAATCAGCTCCCAGCTGCATTG
AAAAGATTGCAATTCGATAAGCAGCTTTCAATGGACAATGTAAGGAAACTTATAACTGAA
GCTGATGGATATCAACCCCATCTGATTGCTCCTGAGCAAGGATATCGTCGTCTTATTGAA
TCTTCCTTGATTTCTATCAAGGGTCCTGCTGAAGCAGCTGTCGATGCGGTTCATGCTATA
CTGAAGGATCTGGTTCACAAGTCAATTAGTGAGACTGCAGAGCTAAAGCAATATCCTTCT
CTTAGAGTTGAGGTCAACGGTGCAGCTGTTGAATCATTAGAAAGGATGAGGGATGAGAGC
AAAAAAGCAACTCTACAGCTTGTTGAAATGGAGTGTAGTTACCTGACTGTAGATTTCTTC
CGGAAACTTCCTCAAGATATTGAGAAGGGAGGGAATCCAACACATTCAATTTTTGACCGA
TACAATGATTCCTATCTTCGAAGGATAGGATCAAATGTGTTGTCTTATGTCAATATGGTT
TGTGCAAGTTTGAGGAATTCCATTCCTAAGTCTGTTGTTTATTGTCAAGTTCGGGAGGCC
AAACGCAGTTTGCTTGATCATTTCTTCACAGACCTGGGCAAGAAGGAGGGGAGACAGCTG
GGTACTTTGTTGGATGAGGATCCAGCTATAATGCAGCGTCGTCTGTCTCTTGCAAAGAGA
CTTGAGTTGTACAGAGCTGCTCAATCTGAGATTGATTCAGTCGCTTGGTCTAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400000482
PEP Infomation

pacid=37439342 transcript=PGSC0003DMT400000645 locus=PGSC0003DMG400000227 ID=PGSC0003DMT400000645.v4.03 annot-version=v4.03
Sequence

MPVVNLTLIDLPGLTKVAVEGQSDSIVADIENMVRAYIEKPNCIILAVSPANQDLATSDA
IKISREVDPKGERTFGVLTKIDLMDKGTDAVDMLEGRAYKLQFPWIGVVNRSQADINKNV
DMIAARRREKEYFSSTPEYRHLASKMGSEHLGKVMSKHLEAVIKSRIPGLQSLINKTIID
LESELSRLGKPIATDAGGKLYMVMEVCRTFDGIFKEHLDGVRPGGDKIYNVFDNQLPAAL
KRLQFDKQLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESSLISIKGPAEAAVDAVHAI
LKDLVHKSISETAELKQYPSLRVEVNGAAVESLERMRDESKKATLQLVEMECSYLTVDFF
RKLPQDIEKGGNPTHSIFDRYNDSYLRRIGSNVLSYVNMVCASLRNSIPKSVVYCQVREA
KRSLLDHFFTDLGKKEGRQLGTLLDEDPAIMQRRLSLAKRLELYRAAQSEIDSVAWSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400000645
Transcript Infomation

pacid=37439342 locus=PGSC0003DMG400000227 ID=PGSC0003DMT400000645.v4.03 annot-version=v4.03
Sequence

ATGCCAGTCGTAAACTTGACACTGATAGATCTTCCCGGACTTACAAAAGTAGCAGTTGAG
GGACAATCTGATAGCATTGTTGCGGATATTGAAAACATGGTTCGCGCTTATATTGAGAAG
CCAAATTGCATTATTCTTGCTGTTTCTCCTGCCAATCAAGATCTTGCAACATCAGATGCT
ATTAAGATTTCTCGCGAAGTAGATCCAAAAGGGGAAAGGACATTTGGTGTTCTGACTAAG
ATTGATCTTATGGATAAGGGTACTGATGCTGTTGATATGTTGGAAGGAAGAGCATATAAA
CTACAATTTCCATGGATAGGTGTTGTCAACCGTTCTCAAGCGGATATTAATAAAAATGTT
GACATGATTGCTGCCAGGCGTAGAGAAAAAGAGTATTTTTCTAGCACCCCCGAGTACAGG
CATCTTGCCAGCAAGATGGGGTCAGAACATCTTGGGAAAGTTATGTCAAAACACTTAGAG
GCTGTTATCAAGTCAAGAATTCCAGGTCTCCAGTCTCTTATCAACAAGACCATCATTGAC
CTAGAAAGTGAATTGAGCCGTCTTGGGAAGCCCATTGCAACTGATGCTGGAGGAAAATTG
TACATGGTTATGGAAGTTTGTCGTACTTTTGATGGAATCTTTAAAGAACATCTTGATGGA
GTTCGACCAGGTGGAGATAAAATATATAATGTCTTTGATAATCAGCTCCCAGCTGCATTG
AAAAGATTGCAATTCGATAAGCAGCTTTCAATGGACAATGTAAGGAAACTTATAACTGAA
GCTGATGGATATCAACCCCATCTGATTGCTCCTGAGCAAGGATATCGTCGTCTTATTGAA
TCTTCCTTGATTTCTATCAAGGGTCCTGCTGAAGCAGCTGTCGATGCGGTTCATGCTATA
CTGAAGGATCTGGTTCACAAGTCAATTAGTGAGACTGCAGAGCTAAAGCAATATCCTTCT
CTTAGAGTTGAGGTCAACGGTGCAGCTGTTGAATCATTAGAAAGGATGAGGGATGAGAGC
AAAAAAGCAACTCTACAGCTTGTTGAAATGGAGTGTAGTTACCTGACTGTAGATTTCTTC
CGGAAACTTCCTCAAGATATTGAGAAGGGAGGGAATCCAACACATTCAATTTTTGACCGA
TACAATGATTCCTATCTTCGAAGGATAGGATCAAATGTGTTGTCTTATGTCAATATGGTT
TGTGCAAGTTTGAGGAATTCCATTCCTAAGTCTGTTGTTTATTGTCAAGTTCGGGAGGCC
AAACGCAGTTTGCTTGATCATTTCTTCACAGACCTGGGCAAGAAGGAGGGGAGACAGCTG
GGTACTTTGTTGGATGAGGATCCAGCTATAATGCAGCGTCGTCTGTCTCTTGCAAAGAGA
CTTGAGTTGTACAGAGCTGCTCAATCTGAGATTGATTCAGTCGCTTGGTCTAAGTAG