Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000613
CDS Infomation

pacid=37439756 polypeptide=PGSC0003DMP400000465 locus=PGSC0003DMG402000216 ID=PGSC0003DMT400000613.v4.03 annot-version=v4.03
Sequence

ATGAAGTATGTAGTTGAAGTTGAGAAAGCTAAAGAAGGGAGATCAAATGGAAGGCCATCA
AGAGGCCCTGTTTATCGTAATGTGTTAGCCAAAGATGGTTTCAGGCCTTTATCTCATTCC
CTTCAAAGTTGCTGGGATATTTTCTGTGAGTCTGTCAGAAAATTTCCAGATAACCGAATG
TTAGGTGAGCGGGAAATGTCCCATGGTCAGGCAGGTAAATACATTTGGTTAACTTATAGG
GAGGTGTATGATCTAGTGTTAAAAGTTGGAGCTTCTATGCGTGTCTGCGGTGTTAAGCAA
GGTGGAAAATGTGGTATATACGGGGCCAATTGCTCCAACTGGGTAATAAGCATGCAGGCC
TGCAATGCTCATGGTCTTTATTGCGTCCCCTTATATGACACTCTAGGTGCTGGTGCAGTA
GAGTATATCATTTGCCATGCAGAAGTTTCTGTTGCTTTTGCGGAGGAAACTAAAATTTCT
GAGGTGCTGAAAGCTTTTCCTAAAGCTGGAAAGTTCCTGAAAAGTCTCATAAGCTTTGGT
AAGGTCACACAGGAACAGAAAGACATGGCTGGAAATTTTGATCTGAAGTTATATTCTTGG
GAAGATTTCCTGTTGCTGGGAATGCAAGAGAAATTTGATCTTCCAGCTAAAAAGAAGACA
GATATATGTACAATCATGTACACAAGTGGAACAACTGGTGACCCAAAGGGAGTCATGATT
TCCAATGAGAGCATTCTATCCCTTATATCTGGAGTGAACCACCATATGGAGACCGTGGGC
GAAGAGTTCACTGATAAGGATGTATATTTATCATACCTTCCTTTAGCGCACATATTTGAT
CGAGTCATTGAAGAATTATTCATCTCTAAAGGTGCCTCAGTTGGTTTTTGGCATAAGGAT
GTTAAACAATTGATTGATGACATCAAAGAGCTAAAGCCAACTGTATTTTGTTCAGTTCCG
CGTGTGCTGGACAGGATTTATTCAGGTTTGGTGGAGAAGATTTCATCTGCTGGTTTCCTT
AAACACAAACTGTTTAATTTTACTTATAACTACAAATTGGGTAACATGAGTAAAGGGTAT
AGGCACTCAGAGGCAGCTCCTATTTTTGACAAAATAATTTTCAATAAGGTGAAGGAGGGT
TTAGGAGGAAACTTGCGTCTCATTCTATCGGGAGCAGCACCTCTCTCTTCCACTGTTGAA
ACTTATTTACGAGTTGTAACATGTGCTAATGTTCTTCAAGGATATGGTTTAACGGAGACC
TGTGCAGGCTCATTTGTTGCAAGACCAGATGAACTGGCAATGGTTGGCACTGTCGGTCCT
CCTTTACCAATTATAGATGTGTGTCTAGAGTCTGTTCCTGAAATGGGGTACGACGCCTTT
GGAGATACCCCTCGTGGAGAGATATGCATAAGAGGGAAGTGTTTATTCTCAGGATACTAT
AAGCGTGAAGACCTCACCAAGGAGGTGTTGGTTGATGGATGGTTCCACACAGGTGATGTT
GGTGAATGGCAGCCGGATGGGAGCATGAAAATTATTGACCGCAAGAAAAACATTTTCAAG
CTCTCCCAAGGAGAATATGTTGCAGTTGAGAATCTGGAGGGAATTTATTCTCTTGCCTCT
AGTGTGGATTCAATATGGATCTATGGTAGTAGCTATGAGTCATTTCTTGTTGCTGTCGTG
AATCCCAATATGGAAGCTCTGCGTTCCTGGGCCAATGAGAATGGAATGACTGGGGATTTT
GATACTATATGTGAGAACCCAAAGGCAAAAGTACATATCCTATCAGAACTAACCAATATT
GCTAAGGAAAAAAAGCTGAAAGGCTTTGAATTTATCAAAGCTGTGCACCTTGACCCTGTA
CCATTTGACATGGAGCGTGAACTTATAACCCCGACTCACAAGAAAAAGAGAGCCCAGTTT
CTCAAATACTACCAGAACAACATTGATACACTGTACAAAAACACAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400000465
PEP Infomation

pacid=37439756 transcript=PGSC0003DMT400000613 locus=PGSC0003DMG402000216 ID=PGSC0003DMT400000613.v4.03 annot-version=v4.03
Sequence

MKYVVEVEKAKEGRSNGRPSRGPVYRNVLAKDGFRPLSHSLQSCWDIFCESVRKFPDNRM
LGEREMSHGQAGKYIWLTYREVYDLVLKVGASMRVCGVKQGGKCGIYGANCSNWVISMQA
CNAHGLYCVPLYDTLGAGAVEYIICHAEVSVAFAEETKISEVLKAFPKAGKFLKSLISFG
KVTQEQKDMAGNFDLKLYSWEDFLLLGMQEKFDLPAKKKTDICTIMYTSGTTGDPKGVMI
SNESILSLISGVNHHMETVGEEFTDKDVYLSYLPLAHIFDRVIEELFISKGASVGFWHKD
VKQLIDDIKELKPTVFCSVPRVLDRIYSGLVEKISSAGFLKHKLFNFTYNYKLGNMSKGY
RHSEAAPIFDKIIFNKVKEGLGGNLRLILSGAAPLSSTVETYLRVVTCANVLQGYGLTET
CAGSFVARPDELAMVGTVGPPLPIIDVCLESVPEMGYDAFGDTPRGEICIRGKCLFSGYY
KREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLEGIYSLAS
SVDSIWIYGSSYESFLVAVVNPNMEALRSWANENGMTGDFDTICENPKAKVHILSELTNI
AKEKKLKGFEFIKAVHLDPVPFDMERELITPTHKKKRAQFLKYYQNNIDTLYKNTR*

Transcript Sequence

Transcript ID

PGSC0003DMT400000613
Transcript Infomation

pacid=37439756 locus=PGSC0003DMG402000216 ID=PGSC0003DMT400000613.v4.03 annot-version=v4.03
Sequence

ATGAAGTATGTAGTTGAAGTTGAGAAAGCTAAAGAAGGGAGATCAAATGGAAGGCCATCA
AGAGGCCCTGTTTATCGTAATGTGTTAGCCAAAGATGGTTTCAGGCCTTTATCTCATTCC
CTTCAAAGTTGCTGGGATATTTTCTGTGAGTCTGTCAGAAAATTTCCAGATAACCGAATG
TTAGGTGAGCGGGAAATGTCCCATGGTCAGGCAGGTAAATACATTTGGTTAACTTATAGG
GAGGTGTATGATCTAGTGTTAAAAGTTGGAGCTTCTATGCGTGTCTGCGGTGTTAAGCAA
GGTGGAAAATGTGGTATATACGGGGCCAATTGCTCCAACTGGGTAATAAGCATGCAGGCC
TGCAATGCTCATGGTCTTTATTGCGTCCCCTTATATGACACTCTAGGTGCTGGTGCAGTA
GAGTATATCATTTGCCATGCAGAAGTTTCTGTTGCTTTTGCGGAGGAAACTAAAATTTCT
GAGGTGCTGAAAGCTTTTCCTAAAGCTGGAAAGTTCCTGAAAAGTCTCATAAGCTTTGGT
AAGGTCACACAGGAACAGAAAGACATGGCTGGAAATTTTGATCTGAAGTTATATTCTTGG
GAAGATTTCCTGTTGCTGGGAATGCAAGAGAAATTTGATCTTCCAGCTAAAAAGAAGACA
GATATATGTACAATCATGTACACAAGTGGAACAACTGGTGACCCAAAGGGAGTCATGATT
TCCAATGAGAGCATTCTATCCCTTATATCTGGAGTGAACCACCATATGGAGACCGTGGGC
GAAGAGTTCACTGATAAGGATGTATATTTATCATACCTTCCTTTAGCGCACATATTTGAT
CGAGTCATTGAAGAATTATTCATCTCTAAAGGTGCCTCAGTTGGTTTTTGGCATAAGGAT
GTTAAACAATTGATTGATGACATCAAAGAGCTAAAGCCAACTGTATTTTGTTCAGTTCCG
CGTGTGCTGGACAGGATTTATTCAGGTTTGGTGGAGAAGATTTCATCTGCTGGTTTCCTT
AAACACAAACTGTTTAATTTTACTTATAACTACAAATTGGGTAACATGAGTAAAGGGTAT
AGGCACTCAGAGGCAGCTCCTATTTTTGACAAAATAATTTTCAATAAGGTGAAGGAGGGT
TTAGGAGGAAACTTGCGTCTCATTCTATCGGGAGCAGCACCTCTCTCTTCCACTGTTGAA
ACTTATTTACGAGTTGTAACATGTGCTAATGTTCTTCAAGGATATGGTTTAACGGAGACC
TGTGCAGGCTCATTTGTTGCAAGACCAGATGAACTGGCAATGGTTGGCACTGTCGGTCCT
CCTTTACCAATTATAGATGTGTGTCTAGAGTCTGTTCCTGAAATGGGGTACGACGCCTTT
GGAGATACCCCTCGTGGAGAGATATGCATAAGAGGGAAGTGTTTATTCTCAGGATACTAT
AAGCGTGAAGACCTCACCAAGGAGGTGTTGGTTGATGGATGGTTCCACACAGGTGATGTT
GGTGAATGGCAGCCGGATGGGAGCATGAAAATTATTGACCGCAAGAAAAACATTTTCAAG
CTCTCCCAAGGAGAATATGTTGCAGTTGAGAATCTGGAGGGAATTTATTCTCTTGCCTCT
AGTGTGGATTCAATATGGATCTATGGTAGTAGCTATGAGTCATTTCTTGTTGCTGTCGTG
AATCCCAATATGGAAGCTCTGCGTTCCTGGGCCAATGAGAATGGAATGACTGGGGATTTT
GATACTATATGTGAGAACCCAAAGGCAAAAGTACATATCCTATCAGAACTAACCAATATT
GCTAAGGAAAAAAAGCTGAAAGGCTTTGAATTTATCAAAGCTGTGCACCTTGACCCTGTA
CCATTTGACATGGAGCGTGAACTTATAACCCCGACTCACAAGAAAAAGAGAGCCCAGTTT
CTCAAATACTACCAGAACAACATTGATACACTGTACAAAAACACAAGATAA