Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000605
CDS Infomation

pacid=37437253 polypeptide=PGSC0003DMP400000458 locus=PGSC0003DMG400000214 ID=PGSC0003DMT400000605.v4.03 annot-version=v4.03
Sequence

ATGGAGGCAATTAATGCAGTAAGATTGACACCTCTCTCTGTTCTTTCTGATAGGAGAAAT
GAGGCCAAGAAAATCCCATCACACCCTATTTCTTTCCCATTCAAGAATCTTTGTTCAGTT
GAGAATTTATCAAGAAATGTTCAAGGGGGTTTAGTACTTGTATCATCAGTTCTAAATACA
GGCTTAGCTAAAGCATTAACATATGAGGAGACACTTGAGCAATCTGCAACAAGCCCAGGT
GCTGAGTTTGATGCAACTGCAGTTGTGGAAACTGTGACCACTTTTGCATCAGAGAATCCT
ATAATTATAGCTGGTGGATTTGCTGCTTTGGCTTTGCCAATTGTTCTGTTTCAGGTTCTT
GGAAAGCCACCTAAGTCATGGGGTGTTGAGTCTGCTAAGACAGCTTATGCAAAATTGGCA
GATGATGCAGGTGCACAGTTGCTTGATATAAGAGCACCTGCAGAATTGAGGGAAGTGGGG
AGTCCTGATATTAGGGGTTTGAAGAAGAAACCAGTTACTGTTGTTTATAAGAGTGAAGAT
AAGACTGGTTTCTTAAAAAAGCTGTCTTTGAAGTTCAAGGAGCCTGAGAATACTACATTG
TTCATTCTAGACAAATTTGATGGAAACTCTGAACTGGTTGCGGAGTTAGTCACAGAAAAT
GGATTTAAAGCTGCTTATGCAATCAAAGATGGTGCTGAAGGACCCCGGGGATGGCTGAAC
AGCAGCCTTCCTTGGATTCTTCCTAAGAAAACATTGGGTCTTGATCTGAGCAATCTGTCT
GATGCTCTTGATGGTGTTCTTGGGGAAGGTTCTGATGCTGTTACTGTAGGCTTAGGTGTT
GCAGCAGCTGCTGGTCTTGGGATTTTAGCCTTCTCAGAGGTAGAAATAATTCTCCAACTG
TTGGGTTCAGCTGCACTTGTCCAACTGGTTAGCAAGAAACTCCTGTTTGCAGAGGACAGA
AAGAAAACTCTGCAACAAGTTGATGAGTTCCTCTCCACTAAGGTTGCTCCAAAGGAACTG
GTAGATGAGATTAAGCAAATAGGGAAGGCTCTTCTTCCAGACTCGGTGAGTAGCAATGCT
CTACCTGCACCTGTAGAGGCAAGCCCTGCTGCAGCCACCAGCACTGTTGAGGAAACTGAA
TCAGTTGCTAAGGAGGATATTGCACCGCCTAAAGTAGAAGCAACTTCCCCGCCTACTCCA
GAAGTCAATGCAGTCCCTAACGCTGAAGTCAAAACTGATGCACTACCTGAAAGTTCAAGG
CCACTCTCGCCTTATCCTAATGTAAGTTTCCGTTTTTATGTTCAACTGCTCTTTTCATCA
TTTTGTTCTAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000458
PEP Infomation

pacid=37437253 transcript=PGSC0003DMT400000605 locus=PGSC0003DMG400000214 ID=PGSC0003DMT400000605.v4.03 annot-version=v4.03
Sequence

MEAINAVRLTPLSVLSDRRNEAKKIPSHPISFPFKNLCSVENLSRNVQGGLVLVSSVLNT
GLAKALTYEETLEQSATSPGAEFDATAVVETVTTFASENPIIIAGGFAALALPIVLFQVL
GKPPKSWGVESAKTAYAKLADDAGAQLLDIRAPAELREVGSPDIRGLKKKPVTVVYKSED
KTGFLKKLSLKFKEPENTTLFILDKFDGNSELVAELVTENGFKAAYAIKDGAEGPRGWLN
SSLPWILPKKTLGLDLSNLSDALDGVLGEGSDAVTVGLGVAAAAGLGILAFSEVEIILQL
LGSAALVQLVSKKLLFAEDRKKTLQQVDEFLSTKVAPKELVDEIKQIGKALLPDSVSSNA
LPAPVEASPAAATSTVEETESVAKEDIAPPKVEATSPPTPEVNAVPNAEVKTDALPESSR
PLSPYPNVSFRFYVQLLFSSFCSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400000605
Transcript Infomation

pacid=37437253 locus=PGSC0003DMG400000214 ID=PGSC0003DMT400000605.v4.03 annot-version=v4.03
Sequence

ATGGAGGCAATTAATGCAGTAAGATTGACACCTCTCTCTGTTCTTTCTGATAGGAGAAAT
GAGGCCAAGAAAATCCCATCACACCCTATTTCTTTCCCATTCAAGAATCTTTGTTCAGTT
GAGAATTTATCAAGAAATGTTCAAGGGGGTTTAGTACTTGTATCATCAGTTCTAAATACA
GGCTTAGCTAAAGCATTAACATATGAGGAGACACTTGAGCAATCTGCAACAAGCCCAGGT
GCTGAGTTTGATGCAACTGCAGTTGTGGAAACTGTGACCACTTTTGCATCAGAGAATCCT
ATAATTATAGCTGGTGGATTTGCTGCTTTGGCTTTGCCAATTGTTCTGTTTCAGGTTCTT
GGAAAGCCACCTAAGTCATGGGGTGTTGAGTCTGCTAAGACAGCTTATGCAAAATTGGCA
GATGATGCAGGTGCACAGTTGCTTGATATAAGAGCACCTGCAGAATTGAGGGAAGTGGGG
AGTCCTGATATTAGGGGTTTGAAGAAGAAACCAGTTACTGTTGTTTATAAGAGTGAAGAT
AAGACTGGTTTCTTAAAAAAGCTGTCTTTGAAGTTCAAGGAGCCTGAGAATACTACATTG
TTCATTCTAGACAAATTTGATGGAAACTCTGAACTGGTTGCGGAGTTAGTCACAGAAAAT
GGATTTAAAGCTGCTTATGCAATCAAAGATGGTGCTGAAGGACCCCGGGGATGGCTGAAC
AGCAGCCTTCCTTGGATTCTTCCTAAGAAAACATTGGGTCTTGATCTGAGCAATCTGTCT
GATGCTCTTGATGGTGTTCTTGGGGAAGGTTCTGATGCTGTTACTGTAGGCTTAGGTGTT
GCAGCAGCTGCTGGTCTTGGGATTTTAGCCTTCTCAGAGGTAGAAATAATTCTCCAACTG
TTGGGTTCAGCTGCACTTGTCCAACTGGTTAGCAAGAAACTCCTGTTTGCAGAGGACAGA
AAGAAAACTCTGCAACAAGTTGATGAGTTCCTCTCCACTAAGGTTGCTCCAAAGGAACTG
GTAGATGAGATTAAGCAAATAGGGAAGGCTCTTCTTCCAGACTCGGTGAGTAGCAATGCT
CTACCTGCACCTGTAGAGGCAAGCCCTGCTGCAGCCACCAGCACTGTTGAGGAAACTGAA
TCAGTTGCTAAGGAGGATATTGCACCGCCTAAAGTAGAAGCAACTTCCCCGCCTACTCCA
GAAGTCAATGCAGTCCCTAACGCTGAAGTCAAAACTGATGCACTACCTGAAAGTTCAAGG
CCACTCTCGCCTTATCCTAATGTAAGTTTCCGTTTTTATGTTCAACTGCTCTTTTCATCA
TTTTGTTCTAACTAA