Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000557
CDS Infomation

pacid=37439266 polypeptide=PGSC0003DMP400000421 locus=PGSC0003DMG400000195 ID=PGSC0003DMT400000557.v4.03 annot-version=v4.03
Sequence

ATGAAACTCGCAGCTGCAAGAAAATCCCTCCTTCATCTTCCCGCACTGCCGAAAACCGGC
AGTATTTCCGGCTTGAGACACTTCTCCGGCGAGATCGACGATACACAGAAACCTCTTCCG
CCGCCGCCAACCTCCTTTGCCGTTCCCGAAATAGTCTCCCTTCTCAAAACTAACGATCAC
AATGACTGGATTTCCAACTCGCAGCTGGTTGAATTTCTTCATACTCCTCCTTCCCCAACT
TCCCTTCTCAAAATCACCCGCCAATTGGGGTCCACTGAAAAAGCTTTACATTTTTTTGAA
TTCTTCAAGACTCATAGTTCGAGTTCATCATCAAACCCCTCTTCTCTTTCCTTCACATTT
CAAGCTATTCTCGAACAAGCAATGCATGAAGAAAAGTCGGACGTACCCGGTAAGCTTTTT
CAACTGTTTTCCTTTGCTAAAGACCGAAAAATCCCTTTATCGATCAATGCTGCGACTCTT
CTTATGCGATGCTTTGGGAGAGCCAAAATGCTCGAGGAATCGATATCTGTGTACAATGAG
CTAGACTCGGATTCAAGAAATACAAATGTGGTTAATTTGTTGTTGGATTGTTTGTTTCGT
GGAGTGAATATTGATGATGGGTTCAAGGTGCTCGACGAAATGCTCAAAAGGGAAAGTGAT
TTTCCTCCGAACAATAGTACGGTGGATATTGTTCTGGATGCTATGTGGAAGAGAAATTGG
GTGGGGAGAAGGATGAGTGTGGAGGAAATTTGTGGACTTCTTGTGAGATTCTTCGAGCAT
GGTGTGTTCTTGGATGATGTGTGGTTTACTAAATTGATTACCAAGTTTTGTCGAAGCGGG
AAGTGTGATAAGGCCTGGGACCTTTTGCATGATATGATGAAGTTGGGTGGTCAGGTGAAA
GCTTCTTCATTCAATGCCCTTTTGAGTGGGTTAGGCCGGGAGCATGATTTTCAAAAGATG
AATTTGCTTATGAATGTGATGAAGGAAAAGGAAGTTAACCCAGATGTTGTGACATTTGGG
ATTTTCATCAATCATTTATGCAAATGTTACAGGGTCGATGAGGCACTTCAGGTGTTCGAG
AAGATGGGAGGGAGTGAAACTGATGGTGTTCTTGTTAAGCCAGACGTTGTTCTCTACAAT
ACATTGATTGATGGACTTTGCAAGGTCGGGAAACAAGAAGAAGGGTTAAAGTTGATGGAA
AAGATGAGATTGAAGAATGGATCTGTACCTAATACTATTACCTACAATTGCTTGATAGAT
GGTTTCTGCAAAGCAGGTGAGATTGAGAGGTCATTGGAGCTTTTTGACCAGATGAAAATG
GACAGGGTTGTGCCAAATGTCATAACTATGAATACTTTGCTCCATGGAATGTGTAAGTTC
GGGAGAGTTAGCAGTGCTATGAGTTTTTTTGCTGAGATGCAAGAGAAGGGTTTAAAGGGG
AATGTGATCACGTACACCGTCCTCATTACCACTTTTTGTAGTGTCAACAATATTGACAGA
GCAATGAGTTTGTTCAATGAAATGTCAGAAAATAGGTGTCTCCCTGATGCCAAAGTATAC
TACAGTTTGATCATGGGCCTTTGCCAGGCTCGAAGAACAGATGACGCCTCCTGTATTGCT
TCAAAGGCGAAAGAAGCTGGGATTGGCTTGGATATTATCTGCTACAATGCTTTGATTGGG
GCACTTTGTAGGAAAAATAAGATTGATGAAGCTCATAAGATGCTTAAAGATATGGAAGAG
GCAGGTATCAAACCTGACTGTTACACCTACAACACTTTGATATCATATTTCAGCGAGAAG
GGGCAATTTACAACTGCCAGTAGAATTATGAAGAGGATGATTGATGATGGTTTTTTGCCT
AATGTTGTTACATATGGAGCATTAATTCATGCATTTTGCTTAGCTGGAAATCTTGATGAA
GCTATGAAAATATTCCAGAATATGAGTTCGGCTATTAATGTGCCACCAAACACAGTCATA
TACAATATTTTGATTGACACTCTCAGCAAGAGTGACAAAGTAGAAGCTGCTATTTCTTTG
TTGGGTGAAATGAAGGACAAAGGGGTAAGACCAAATACCAAAACATACAATGCCCTCTTT
AAAGGTCTTCAGGAGAGGAATTGGGTGGAAAAGGCATTTGAAATAATGGACCAAATGACT
GAAAATGCTTGTAATCCTGACTACATTACCATGGAAGTCCTCACTCCATGGCTTTCTGAC
ATTGGTGAAACAGAAAAGTTGCGAAGTTTTGTGGAAGGATACGAGGTTTCTACTTCAACT
GCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000421
PEP Infomation

pacid=37439266 transcript=PGSC0003DMT400000557 locus=PGSC0003DMG400000195 ID=PGSC0003DMT400000557.v4.03 annot-version=v4.03
Sequence

MKLAAARKSLLHLPALPKTGSISGLRHFSGEIDDTQKPLPPPPTSFAVPEIVSLLKTNDH
NDWISNSQLVEFLHTPPSPTSLLKITRQLGSTEKALHFFEFFKTHSSSSSSNPSSLSFTF
QAILEQAMHEEKSDVPGKLFQLFSFAKDRKIPLSINAATLLMRCFGRAKMLEESISVYNE
LDSDSRNTNVVNLLLDCLFRGVNIDDGFKVLDEMLKRESDFPPNNSTVDIVLDAMWKRNW
VGRRMSVEEICGLLVRFFEHGVFLDDVWFTKLITKFCRSGKCDKAWDLLHDMMKLGGQVK
ASSFNALLSGLGREHDFQKMNLLMNVMKEKEVNPDVVTFGIFINHLCKCYRVDEALQVFE
KMGGSETDGVLVKPDVVLYNTLIDGLCKVGKQEEGLKLMEKMRLKNGSVPNTITYNCLID
GFCKAGEIERSLELFDQMKMDRVVPNVITMNTLLHGMCKFGRVSSAMSFFAEMQEKGLKG
NVITYTVLITTFCSVNNIDRAMSLFNEMSENRCLPDAKVYYSLIMGLCQARRTDDASCIA
SKAKEAGIGLDIICYNALIGALCRKNKIDEAHKMLKDMEEAGIKPDCYTYNTLISYFSEK
GQFTTASRIMKRMIDDGFLPNVVTYGALIHAFCLAGNLDEAMKIFQNMSSAINVPPNTVI
YNILIDTLSKSDKVEAAISLLGEMKDKGVRPNTKTYNALFKGLQERNWVEKAFEIMDQMT
ENACNPDYITMEVLTPWLSDIGETEKLRSFVEGYEVSTSTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400000557
Transcript Infomation

pacid=37439266 locus=PGSC0003DMG400000195 ID=PGSC0003DMT400000557.v4.03 annot-version=v4.03
Sequence

ATGAAACTCGCAGCTGCAAGAAAATCCCTCCTTCATCTTCCCGCACTGCCGAAAACCGGC
AGTATTTCCGGCTTGAGACACTTCTCCGGCGAGATCGACGATACACAGAAACCTCTTCCG
CCGCCGCCAACCTCCTTTGCCGTTCCCGAAATAGTCTCCCTTCTCAAAACTAACGATCAC
AATGACTGGATTTCCAACTCGCAGCTGGTTGAATTTCTTCATACTCCTCCTTCCCCAACT
TCCCTTCTCAAAATCACCCGCCAATTGGGGTCCACTGAAAAAGCTTTACATTTTTTTGAA
TTCTTCAAGACTCATAGTTCGAGTTCATCATCAAACCCCTCTTCTCTTTCCTTCACATTT
CAAGCTATTCTCGAACAAGCAATGCATGAAGAAAAGTCGGACGTACCCGGTAAGCTTTTT
CAACTGTTTTCCTTTGCTAAAGACCGAAAAATCCCTTTATCGATCAATGCTGCGACTCTT
CTTATGCGATGCTTTGGGAGAGCCAAAATGCTCGAGGAATCGATATCTGTGTACAATGAG
CTAGACTCGGATTCAAGAAATACAAATGTGGTTAATTTGTTGTTGGATTGTTTGTTTCGT
GGAGTGAATATTGATGATGGGTTCAAGGTGCTCGACGAAATGCTCAAAAGGGAAAGTGAT
TTTCCTCCGAACAATAGTACGGTGGATATTGTTCTGGATGCTATGTGGAAGAGAAATTGG
GTGGGGAGAAGGATGAGTGTGGAGGAAATTTGTGGACTTCTTGTGAGATTCTTCGAGCAT
GGTGTGTTCTTGGATGATGTGTGGTTTACTAAATTGATTACCAAGTTTTGTCGAAGCGGG
AAGTGTGATAAGGCCTGGGACCTTTTGCATGATATGATGAAGTTGGGTGGTCAGGTGAAA
GCTTCTTCATTCAATGCCCTTTTGAGTGGGTTAGGCCGGGAGCATGATTTTCAAAAGATG
AATTTGCTTATGAATGTGATGAAGGAAAAGGAAGTTAACCCAGATGTTGTGACATTTGGG
ATTTTCATCAATCATTTATGCAAATGTTACAGGGTCGATGAGGCACTTCAGGTGTTCGAG
AAGATGGGAGGGAGTGAAACTGATGGTGTTCTTGTTAAGCCAGACGTTGTTCTCTACAAT
ACATTGATTGATGGACTTTGCAAGGTCGGGAAACAAGAAGAAGGGTTAAAGTTGATGGAA
AAGATGAGATTGAAGAATGGATCTGTACCTAATACTATTACCTACAATTGCTTGATAGAT
GGTTTCTGCAAAGCAGGTGAGATTGAGAGGTCATTGGAGCTTTTTGACCAGATGAAAATG
GACAGGGTTGTGCCAAATGTCATAACTATGAATACTTTGCTCCATGGAATGTGTAAGTTC
GGGAGAGTTAGCAGTGCTATGAGTTTTTTTGCTGAGATGCAAGAGAAGGGTTTAAAGGGG
AATGTGATCACGTACACCGTCCTCATTACCACTTTTTGTAGTGTCAACAATATTGACAGA
GCAATGAGTTTGTTCAATGAAATGTCAGAAAATAGGTGTCTCCCTGATGCCAAAGTATAC
TACAGTTTGATCATGGGCCTTTGCCAGGCTCGAAGAACAGATGACGCCTCCTGTATTGCT
TCAAAGGCGAAAGAAGCTGGGATTGGCTTGGATATTATCTGCTACAATGCTTTGATTGGG
GCACTTTGTAGGAAAAATAAGATTGATGAAGCTCATAAGATGCTTAAAGATATGGAAGAG
GCAGGTATCAAACCTGACTGTTACACCTACAACACTTTGATATCATATTTCAGCGAGAAG
GGGCAATTTACAACTGCCAGTAGAATTATGAAGAGGATGATTGATGATGGTTTTTTGCCT
AATGTTGTTACATATGGAGCATTAATTCATGCATTTTGCTTAGCTGGAAATCTTGATGAA
GCTATGAAAATATTCCAGAATATGAGTTCGGCTATTAATGTGCCACCAAACACAGTCATA
TACAATATTTTGATTGACACTCTCAGCAAGAGTGACAAAGTAGAAGCTGCTATTTCTTTG
TTGGGTGAAATGAAGGACAAAGGGGTAAGACCAAATACCAAAACATACAATGCCCTCTTT
AAAGGTCTTCAGGAGAGGAATTGGGTGGAAAAGGCATTTGAAATAATGGACCAAATGACT
GAAAATGCTTGTAATCCTGACTACATTACCATGGAAGTCCTCACTCCATGGCTTTCTGAC
ATTGGTGAAACAGAAAAGTTGCGAAGTTTTGTGGAAGGATACGAGGTTTCTACTTCAACT
GCCTAA