Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000536
CDS Infomation

pacid=37437142 polypeptide=PGSC0003DMP400000404 locus=PGSC0003DMG400000184 ID=PGSC0003DMT400000536.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAACATCCTCCTCCTCTTCCTCTCCTTCTCTTAAAGCTTCATCAAGTGTTACC
AATGATTTTCAAGCAATTATAATGGCTCTAATATTAATTGTTACAATTGGGTATTTTATA
CTTTTGATAGTAACACCAACCAATATGTATAGACAAATATGGACACCCAAGATTAAAGCT
CACACAACCAACTCCACATACTTTGGAGCTCAAGGAAGGACTTTGTTGATGAACACATTT
CCTCTCATATTTATTGCTGTCTTGGGATGTGTATACCTCCATTTATGGAAGAAATCCAAT
AATAAAAACATCAACAGAGTTGAGGAGAAACAAAAGTTGGCTATATGGAAGAGGCCAATA
ATCATGAAGGGACTAGGAATTGTATCAAGAATAGAGCTTGGCTTTTTTGTGATGTTTATT
GCACTCTTAGTTTGGACTTTTGCTTCTTACTTGCATATTATTTTTCCCACTATTACACCA
AAATCCGTAGCCAAAAGTGGAGAAAAAGTATGGGAAGCCAAGTTGGAAGATTCAGGGCTG
AGGTTGGGACTTGTTGGAAATATATGCTTAACATTTCTGTTTGTTCCAGTCACAAGAGGC
TCATCTGTGTTGCAAGTATTTGGTTTGACATCAGAAGCAAGTGTTAAATATCATATATGG
CTTGGCCATATTGTAATGACTCTTTTCTCTGGTCATGGTATTTGTTACATTATCTATTGG
GCTGCCACTCATCAATTGTCTGAGATGCTGAAATGGGGAAAAACTGATATATCAAATTTG
GCTGGTGAATTGTCATTGCTTTCTGGATTGGTGTTGTGGATAGCAACATTTCCTAGAATT
AGGAGAAAGATGTTTGAACTCTTCTTCTACACTCATCATTTCTACATTCTCTTTGTCGTC
TTCTTCGTCTTCCATGTTGGTGTTTCTTACGCTTGCATCATGCTTCCTGGTTTCTTCCTC
TTCATGGTTGATCGATTCTTGAGATTCTTACAGTCACGATCAAATGTTCGTTTAGTCTCC
GCTCGTGTTCTACCATGTGAAACTCTTGAGCTGAATTTCTCCAAGACTAGAGGTTTAAGT
TACACACCAACTAGCATCATGTTTGTGAATGTACCTAGCATTTCAAAATTGCAATGGCAT
CCTTTTACAATCACTTCAAGTAGTAATTTGGAGCCAGAGAAGATCAGTGTTGCCATCAAG
GGTGAAGGAAGTTGGTCCAAAAAGCTCTACCAGATGATCTCTTCCCCTAATTCTGTCGAT
CGTCTTAACGTATCTGTTGAAGGACCTTATGGACCTCCTTCCACACATTTTCTAAGGCAT
GATTTATTGGTTATGGTAAGTGGAGGAAGTGGAATTACCCCTTTCATCTCCATAATTAGG
GAGCTAATCCACACAAGTGAGTCACAAAAATGCAAGACACCAGAAATCCTACTCATCAGT
GTGTTCAAGAACTCGGAAGATCTCACCATGTTGGACCTTCTCCTTCCTATATCCTGTGCC
CCATCAGAAACTTGTAAATTGGGGTTACAAATTGAGGCTTTTGTAACAAGAGAAAAGCAA
CCTGTGTCGACAGAAGACAAGAAGAACTTGAGGACCATATGGTTCAAGCCCAACCCATCT
GATGAGCCTATCACACCAATTCTTGGACAAAACAATTGGCTCTGGCTTGGTGCTATCATA
TCATGTTCCTTCATCATTTTCTTGATTTCCCTAGGAATCTTGAATAGATATTACATATAT
CCAATCGACAAAAATACTAATGATATATTTTCTTATCCAATAAAGGCCGTGTTGAATATG
CTAATCATTTGCATATCTATAGTCATCACAAGTAGTGCTGCATTTGTTTGGAACAAGAGA
CAGAGTGGCACTGATGCAAAACAGATTCAGAACATGGAAGGTGCAACTCCTATGGCTTCG
CCTAATTCTTGGTTCTATAATGCTGATAGGGAGATGGAAAGTTTTCCCCAACAGTCACTT
TTTCAATCAACTAATCTCCATTTTGGTGAAAGGCCTGACCTCAAAAGACTATTGTTTGAG
AGGAAAGAATCAAGTGTTGGAGTTTTAGTGTGTGGCCCAAAAAAGATGAGACATGAAGTT
GCTACCATATGTTCATCTGGTTTAGCATCCAACCTTCATTTTGAGTCTATCAGTTTCAGT
TGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000404
PEP Infomation

pacid=37437142 transcript=PGSC0003DMT400000536 locus=PGSC0003DMG400000184 ID=PGSC0003DMT400000536.v4.03 annot-version=v4.03
Sequence

MAQTSSSSSSPSLKASSSVTNDFQAIIMALILIVTIGYFILLIVTPTNMYRQIWTPKIKA
HTTNSTYFGAQGRTLLMNTFPLIFIAVLGCVYLHLWKKSNNKNINRVEEKQKLAIWKRPI
IMKGLGIVSRIELGFFVMFIALLVWTFASYLHIIFPTITPKSVAKSGEKVWEAKLEDSGL
RLGLVGNICLTFLFVPVTRGSSVLQVFGLTSEASVKYHIWLGHIVMTLFSGHGICYIIYW
AATHQLSEMLKWGKTDISNLAGELSLLSGLVLWIATFPRIRRKMFELFFYTHHFYILFVV
FFVFHVGVSYACIMLPGFFLFMVDRFLRFLQSRSNVRLVSARVLPCETLELNFSKTRGLS
YTPTSIMFVNVPSISKLQWHPFTITSSSNLEPEKISVAIKGEGSWSKKLYQMISSPNSVD
RLNVSVEGPYGPPSTHFLRHDLLVMVSGGSGITPFISIIRELIHTSESQKCKTPEILLIS
VFKNSEDLTMLDLLLPISCAPSETCKLGLQIEAFVTREKQPVSTEDKKNLRTIWFKPNPS
DEPITPILGQNNWLWLGAIISCSFIIFLISLGILNRYYIYPIDKNTNDIFSYPIKAVLNM
LIICISIVITSSAAFVWNKRQSGTDAKQIQNMEGATPMASPNSWFYNADREMESFPQQSL
FQSTNLHFGERPDLKRLLFERKESSVGVLVCGPKKMRHEVATICSSGLASNLHFESISFS
W*

Transcript Sequence

Transcript ID

PGSC0003DMT400000536
Transcript Infomation

pacid=37437142 locus=PGSC0003DMG400000184 ID=PGSC0003DMT400000536.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAACATCCTCCTCCTCTTCCTCTCCTTCTCTTAAAGCTTCATCAAGTGTTACC
AATGATTTTCAAGCAATTATAATGGCTCTAATATTAATTGTTACAATTGGGTATTTTATA
CTTTTGATAGTAACACCAACCAATATGTATAGACAAATATGGACACCCAAGATTAAAGCT
CACACAACCAACTCCACATACTTTGGAGCTCAAGGAAGGACTTTGTTGATGAACACATTT
CCTCTCATATTTATTGCTGTCTTGGGATGTGTATACCTCCATTTATGGAAGAAATCCAAT
AATAAAAACATCAACAGAGTTGAGGAGAAACAAAAGTTGGCTATATGGAAGAGGCCAATA
ATCATGAAGGGACTAGGAATTGTATCAAGAATAGAGCTTGGCTTTTTTGTGATGTTTATT
GCACTCTTAGTTTGGACTTTTGCTTCTTACTTGCATATTATTTTTCCCACTATTACACCA
AAATCCGTAGCCAAAAGTGGAGAAAAAGTATGGGAAGCCAAGTTGGAAGATTCAGGGCTG
AGGTTGGGACTTGTTGGAAATATATGCTTAACATTTCTGTTTGTTCCAGTCACAAGAGGC
TCATCTGTGTTGCAAGTATTTGGTTTGACATCAGAAGCAAGTGTTAAATATCATATATGG
CTTGGCCATATTGTAATGACTCTTTTCTCTGGTCATGGTATTTGTTACATTATCTATTGG
GCTGCCACTCATCAATTGTCTGAGATGCTGAAATGGGGAAAAACTGATATATCAAATTTG
GCTGGTGAATTGTCATTGCTTTCTGGATTGGTGTTGTGGATAGCAACATTTCCTAGAATT
AGGAGAAAGATGTTTGAACTCTTCTTCTACACTCATCATTTCTACATTCTCTTTGTCGTC
TTCTTCGTCTTCCATGTTGGTGTTTCTTACGCTTGCATCATGCTTCCTGGTTTCTTCCTC
TTCATGGTTGATCGATTCTTGAGATTCTTACAGTCACGATCAAATGTTCGTTTAGTCTCC
GCTCGTGTTCTACCATGTGAAACTCTTGAGCTGAATTTCTCCAAGACTAGAGGTTTAAGT
TACACACCAACTAGCATCATGTTTGTGAATGTACCTAGCATTTCAAAATTGCAATGGCAT
CCTTTTACAATCACTTCAAGTAGTAATTTGGAGCCAGAGAAGATCAGTGTTGCCATCAAG
GGTGAAGGAAGTTGGTCCAAAAAGCTCTACCAGATGATCTCTTCCCCTAATTCTGTCGAT
CGTCTTAACGTATCTGTTGAAGGACCTTATGGACCTCCTTCCACACATTTTCTAAGGCAT
GATTTATTGGTTATGGTAAGTGGAGGAAGTGGAATTACCCCTTTCATCTCCATAATTAGG
GAGCTAATCCACACAAGTGAGTCACAAAAATGCAAGACACCAGAAATCCTACTCATCAGT
GTGTTCAAGAACTCGGAAGATCTCACCATGTTGGACCTTCTCCTTCCTATATCCTGTGCC
CCATCAGAAACTTGTAAATTGGGGTTACAAATTGAGGCTTTTGTAACAAGAGAAAAGCAA
CCTGTGTCGACAGAAGACAAGAAGAACTTGAGGACCATATGGTTCAAGCCCAACCCATCT
GATGAGCCTATCACACCAATTCTTGGACAAAACAATTGGCTCTGGCTTGGTGCTATCATA
TCATGTTCCTTCATCATTTTCTTGATTTCCCTAGGAATCTTGAATAGATATTACATATAT
CCAATCGACAAAAATACTAATGATATATTTTCTTATCCAATAAAGGCCGTGTTGAATATG
CTAATCATTTGCATATCTATAGTCATCACAAGTAGTGCTGCATTTGTTTGGAACAAGAGA
CAGAGTGGCACTGATGCAAAACAGATTCAGAACATGGAAGGTGCAACTCCTATGGCTTCG
CCTAATTCTTGGTTCTATAATGCTGATAGGGAGATGGAAAGTTTTCCCCAACAGTCACTT
TTTCAATCAACTAATCTCCATTTTGGTGAAAGGCCTGACCTCAAAAGACTATTGTTTGAG
AGGAAAGAATCAAGTGTTGGAGTTTTAGTGTGTGGCCCAAAAAAGATGAGACATGAAGTT
GCTACCATATGTTCATCTGGTTTAGCATCCAACCTTCATTTTGAGTCTATCAGTTTCAGT
TGGTGA