Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000500
CDS Infomation

pacid=37441123 polypeptide=PGSC0003DMP400000377 locus=PGSC0003DMG400000174 ID=PGSC0003DMT400000500.v4.03 annot-version=v4.03
Sequence

ATGGGTGATGAAGGAAATCCACAAACTCCTAGAAGAACCACTAGAGCATCATTGTCTAGC
ACACCGAATCCAAAAAGTTCTACAGGGAAGTTAAAATCATGTAATTTGTTGCCTTTCACA
ATACATGATCTCGCTTATGGAGATGAATCAATTAGTTTCAATGATTTGATTTCTAGTTTA
CCTGGTAGACGTGCACAAATTATTGAATTATTACACCTTTTGGGCCCTTTGGATTCTCCA
ATGTTTCCTGTGTTTGTATATGGAGGTGCTTCGACTGGGAAAACAAGTTCGATTCTTCAG
ACATTTAAGCACCTAAAACGTCCATTTGTTTACTGCAGTTGTATAACGTGCTATAACCCA
AGGATACTATTTGAATCTGTGTTGAACCAGTTATTGCTTCATAGAAGAAATGAAAGCAAT
CGTTATTCCAGTACGAAACGCTGTGAAAGGCCCTCCGATTTTGTAAATCTTTTGCAGGAG
GCTCTTCATAATGTGGTAGATAGTTTGAAGGGGAATGTGGAGAAATCAAGCTCGAAGAAG
TCGGTGGGAAGGGCTAGGGGAAAAATGGTTTACTTGGTATTTGATAACTTGGAGCTTGCT
CGTGAATGGGATAAGAGTTCCAACATATTGCCTTTTCTCTTTAAGCTCTATGATATTCTG
AAAATGCCAGAAGTGGGTTTGATTTTTCTCAGTAATGCCTCACCTGACACTTATTACTCG
GACACTGGTTATGTAGAACCCGTTCCTGTTTACTTTCCTGATTACACCGAGGATGAGCTT
CGTCAAATCTTAATGAAAAACCAGAAAAACCCAAAGCTATATTCCTCATTTCTTGGAGTG
GTGTTGAGGCCATTTTGTCGAGTTACTCGGCGAGTTGATGAATTATTGACTGCATTCTCA
TCATTATATCAGATATATTGTGAACCTCTTGATGATTTAGGCATTGTTCCAAATGAAGAT
ATGAAAAGAAAACTTTTTTCTCATCTTCAACCACATATTGGACCATCCCTGAACGAAACG
TTCAAAGTTGAAAGCAGGCTGTCTTCTGAAGCCTCATCTAACACGAACAAATGGAAAGGC
ATTGCCAAGAAAGTTGGAGTTAGTGAATCTTCCAATGAGATAGACTTTCACATGTCTGCA
TGTGCCAAATATCTTCTTATTTGTGCTTTCCTTGCTTCAAGAAATCCAGCTACCCTTGAC
GCATCCATGTTTGACTCAACTGGAGGTTCCAATAACAAAAAACGAAAGAGGAGCTCAGAG
AAGTCAAAAGAGAAGAAGGAAATTGCAGAACAAGAATTGCTCTTGAAGGGACCAGGAACG
TTTCCCTTGGAAAGATTATTAGCCATCTTCCAGTGTATCGTATCTGTGTCAGAATGCTTA
CCTGATGAAGAAGCACAAGGAGATGGTGGATTGGAAGGAGAGAGTTGGACTAACGGGCTA
TTGTCTGATGTTCTTTTGGAATTATCAAGTCTGTGTAATGCCAATTTTATCAGTAAAGGC
GGAAGTTGCCCCTTGGAAGGCGCTAATCGGTATCGATCTATGGTGTCTGAAGCTATGGCT
CTTAAGGTTGCAAAGAGTCTAAAATTTCCTCTGGCAAAGTATTTATATAGAGGAGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000377
PEP Infomation

pacid=37441123 transcript=PGSC0003DMT400000500 locus=PGSC0003DMG400000174 ID=PGSC0003DMT400000500.v4.03 annot-version=v4.03
Sequence

MGDEGNPQTPRRTTRASLSSTPNPKSSTGKLKSCNLLPFTIHDLAYGDESISFNDLISSL
PGRRAQIIELLHLLGPLDSPMFPVFVYGGASTGKTSSILQTFKHLKRPFVYCSCITCYNP
RILFESVLNQLLLHRRNESNRYSSTKRCERPSDFVNLLQEALHNVVDSLKGNVEKSSSKK
SVGRARGKMVYLVFDNLELAREWDKSSNILPFLFKLYDILKMPEVGLIFLSNASPDTYYS
DTGYVEPVPVYFPDYTEDELRQILMKNQKNPKLYSSFLGVVLRPFCRVTRRVDELLTAFS
SLYQIYCEPLDDLGIVPNEDMKRKLFSHLQPHIGPSLNETFKVESRLSSEASSNTNKWKG
IAKKVGVSESSNEIDFHMSACAKYLLICAFLASRNPATLDASMFDSTGGSNNKKRKRSSE
KSKEKKEIAEQELLLKGPGTFPLERLLAIFQCIVSVSECLPDEEAQGDGGLEGESWTNGL
LSDVLLELSSLCNANFISKGGSCPLEGANRYRSMVSEAMALKVAKSLKFPLAKYLYRGG*

Transcript Sequence

Transcript ID

PGSC0003DMT400000500
Transcript Infomation

pacid=37441123 locus=PGSC0003DMG400000174 ID=PGSC0003DMT400000500.v4.03 annot-version=v4.03
Sequence

ATGGGTGATGAAGGAAATCCACAAACTCCTAGAAGAACCACTAGAGCATCATTGTCTAGC
ACACCGAATCCAAAAAGTTCTACAGGGAAGTTAAAATCATGTAATTTGTTGCCTTTCACA
ATACATGATCTCGCTTATGGAGATGAATCAATTAGTTTCAATGATTTGATTTCTAGTTTA
CCTGGTAGACGTGCACAAATTATTGAATTATTACACCTTTTGGGCCCTTTGGATTCTCCA
ATGTTTCCTGTGTTTGTATATGGAGGTGCTTCGACTGGGAAAACAAGTTCGATTCTTCAG
ACATTTAAGCACCTAAAACGTCCATTTGTTTACTGCAGTTGTATAACGTGCTATAACCCA
AGGATACTATTTGAATCTGTGTTGAACCAGTTATTGCTTCATAGAAGAAATGAAAGCAAT
CGTTATTCCAGTACGAAACGCTGTGAAAGGCCCTCCGATTTTGTAAATCTTTTGCAGGAG
GCTCTTCATAATGTGGTAGATAGTTTGAAGGGGAATGTGGAGAAATCAAGCTCGAAGAAG
TCGGTGGGAAGGGCTAGGGGAAAAATGGTTTACTTGGTATTTGATAACTTGGAGCTTGCT
CGTGAATGGGATAAGAGTTCCAACATATTGCCTTTTCTCTTTAAGCTCTATGATATTCTG
AAAATGCCAGAAGTGGGTTTGATTTTTCTCAGTAATGCCTCACCTGACACTTATTACTCG
GACACTGGTTATGTAGAACCCGTTCCTGTTTACTTTCCTGATTACACCGAGGATGAGCTT
CGTCAAATCTTAATGAAAAACCAGAAAAACCCAAAGCTATATTCCTCATTTCTTGGAGTG
GTGTTGAGGCCATTTTGTCGAGTTACTCGGCGAGTTGATGAATTATTGACTGCATTCTCA
TCATTATATCAGATATATTGTGAACCTCTTGATGATTTAGGCATTGTTCCAAATGAAGAT
ATGAAAAGAAAACTTTTTTCTCATCTTCAACCACATATTGGACCATCCCTGAACGAAACG
TTCAAAGTTGAAAGCAGGCTGTCTTCTGAAGCCTCATCTAACACGAACAAATGGAAAGGC
ATTGCCAAGAAAGTTGGAGTTAGTGAATCTTCCAATGAGATAGACTTTCACATGTCTGCA
TGTGCCAAATATCTTCTTATTTGTGCTTTCCTTGCTTCAAGAAATCCAGCTACCCTTGAC
GCATCCATGTTTGACTCAACTGGAGGTTCCAATAACAAAAAACGAAAGAGGAGCTCAGAG
AAGTCAAAAGAGAAGAAGGAAATTGCAGAACAAGAATTGCTCTTGAAGGGACCAGGAACG
TTTCCCTTGGAAAGATTATTAGCCATCTTCCAGTGTATCGTATCTGTGTCAGAATGCTTA
CCTGATGAAGAAGCACAAGGAGATGGTGGATTGGAAGGAGAGAGTTGGACTAACGGGCTA
TTGTCTGATGTTCTTTTGGAATTATCAAGTCTGTGTAATGCCAATTTTATCAGTAAAGGC
GGAAGTTGCCCCTTGGAAGGCGCTAATCGGTATCGATCTATGGTGTCTGAAGCTATGGCT
CTTAAGGTTGCAAAGAGTCTAAAATTTCCTCTGGCAAAGTATTTATATAGAGGAGGATGA