Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000478
CDS Infomation

pacid=37437486 polypeptide=PGSC0003DMP400000361 locus=PGSC0003DMG400000165 ID=PGSC0003DMT400000478.v4.03 annot-version=v4.03
Sequence

ATGCAGTCCTGCAAAGCCGCTCCCAGTAACCCACAGGGTGCTGGAACAAACACGGAACAG
GTGTATTCTGAATCGGAGAATTTTGTTGTGACAGAAAATAGTTTGGATAATGACCAGTCT
GTGGATGTTGAGGACAGTGGTTCAGGGGATAATAGTGAGTTGGATCCAGAGGCATCACGA
TTAATTCCTGGGCTTCCTGATGACATTGCACTTTTCTGCTTGGCAAGGGTTCCTCGAAGG
CATCATGTGCTTCTGAAATGTGTGTCAAGAAAATGGAGAGACTTGGTTAGTGGTGAAGAG
TGGTACTCCTATAGAAAAAAACATGATCTCCAGGAGAGTTGGATTTATGCCTTAGGTAGA
GACAAGTCTGAACAGCTGTGTTGTTATGTTTTGGATCCAACTCGATTAAAAAGGGGATGG
AAGCCCATTCTAGGACTTCCACATCGCTGCATAAGGAGAAAAGGTGTAGGCTTTGAAGTG
TTAGGGAAGAAACTATTCCTATTCGGTGGATGTGGCTGGATTGAAGATGCTACTAACGAA
GTCTATTGCTATGATGCTGCCATGAATAAGTGGAATCAAGCTACTTCCTTGGTGGTTCCA
AGGTGCTACTCTGTATCTGAAGTGTTAGATGAAAAAATCTATGCAATTGGGGGAATAGGG
CCAAATTCCAATAATTTACCTTCCTGGGAAACTTACAACACGGAAACAACAAGTTGGACT
TTGCATGAAAACCCTAACATTTTCCCTGATATTGAAGATTCTATAGTCTTGGGTGGGAAG
ATTTACATTCGCGGGGGTTCTTCACCTCTATCTTCTTTAGTGTCTGCATTTGTCTATGAA
CGATCAAGCAACACATGGCAGCCAGCAGCTTCTGAATTAGTATCAGGTTGGTATGGTCCA
GCAGTTGTCGTAGATGGGACGCTTTATGTGTTAGATCAGTCTTCAGGTACCAGGTTGATG
ATGTGGCAAAAGGATATTAGGGAATGGGTGGCAGTTGGGAGATTGTCACCCCTATTGACA
AAGCCTCCCTGTCGGCTTGTGGCGGTGGGGAATAATATCTTTATTATTGGAAAGGGCCTT
AGCACTGTCGTTTTTAATGTTGAAAACGCAAGGAACATGGATGGTGTGTTAGTGAGCACT
TCCATTCCAAAGTCAATATCTGACGATGATGTAATAAGTTGTAAAGCAATCACAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000361
PEP Infomation

pacid=37437486 transcript=PGSC0003DMT400000478 locus=PGSC0003DMG400000165 ID=PGSC0003DMT400000478.v4.03 annot-version=v4.03
Sequence

MQSCKAAPSNPQGAGTNTEQVYSESENFVVTENSLDNDQSVDVEDSGSGDNSELDPEASR
LIPGLPDDIALFCLARVPRRHHVLLKCVSRKWRDLVSGEEWYSYRKKHDLQESWIYALGR
DKSEQLCCYVLDPTRLKRGWKPILGLPHRCIRRKGVGFEVLGKKLFLFGGCGWIEDATNE
VYCYDAAMNKWNQATSLVVPRCYSVSEVLDEKIYAIGGIGPNSNNLPSWETYNTETTSWT
LHENPNIFPDIEDSIVLGGKIYIRGGSSPLSSLVSAFVYERSSNTWQPAASELVSGWYGP
AVVVDGTLYVLDQSSGTRLMMWQKDIREWVAVGRLSPLLTKPPCRLVAVGNNIFIIGKGL
STVVFNVENARNMDGVLVSTSIPKSISDDDVISCKAITI*

Transcript Sequence

Transcript ID

PGSC0003DMT400000478
Transcript Infomation

pacid=37437486 locus=PGSC0003DMG400000165 ID=PGSC0003DMT400000478.v4.03 annot-version=v4.03
Sequence

ATGCAGTCCTGCAAAGCCGCTCCCAGTAACCCACAGGGTGCTGGAACAAACACGGAACAG
GTGTATTCTGAATCGGAGAATTTTGTTGTGACAGAAAATAGTTTGGATAATGACCAGTCT
GTGGATGTTGAGGACAGTGGTTCAGGGGATAATAGTGAGTTGGATCCAGAGGCATCACGA
TTAATTCCTGGGCTTCCTGATGACATTGCACTTTTCTGCTTGGCAAGGGTTCCTCGAAGG
CATCATGTGCTTCTGAAATGTGTGTCAAGAAAATGGAGAGACTTGGTTAGTGGTGAAGAG
TGGTACTCCTATAGAAAAAAACATGATCTCCAGGAGAGTTGGATTTATGCCTTAGGTAGA
GACAAGTCTGAACAGCTGTGTTGTTATGTTTTGGATCCAACTCGATTAAAAAGGGGATGG
AAGCCCATTCTAGGACTTCCACATCGCTGCATAAGGAGAAAAGGTGTAGGCTTTGAAGTG
TTAGGGAAGAAACTATTCCTATTCGGTGGATGTGGCTGGATTGAAGATGCTACTAACGAA
GTCTATTGCTATGATGCTGCCATGAATAAGTGGAATCAAGCTACTTCCTTGGTGGTTCCA
AGGTGCTACTCTGTATCTGAAGTGTTAGATGAAAAAATCTATGCAATTGGGGGAATAGGG
CCAAATTCCAATAATTTACCTTCCTGGGAAACTTACAACACGGAAACAACAAGTTGGACT
TTGCATGAAAACCCTAACATTTTCCCTGATATTGAAGATTCTATAGTCTTGGGTGGGAAG
ATTTACATTCGCGGGGGTTCTTCACCTCTATCTTCTTTAGTGTCTGCATTTGTCTATGAA
CGATCAAGCAACACATGGCAGCCAGCAGCTTCTGAATTAGTATCAGGTTGGTATGGTCCA
GCAGTTGTCGTAGATGGGACGCTTTATGTGTTAGATCAGTCTTCAGGTACCAGGTTGATG
ATGTGGCAAAAGGATATTAGGGAATGGGTGGCAGTTGGGAGATTGTCACCCCTATTGACA
AAGCCTCCCTGTCGGCTTGTGGCGGTGGGGAATAATATCTTTATTATTGGAAAGGGCCTT
AGCACTGTCGTTTTTAATGTTGAAAACGCAAGGAACATGGATGGTGTGTTAGTGAGCACT
TCCATTCCAAAGTCAATATCTGACGATGATGTAATAAGTTGTAAAGCAATCACAATCTAA