Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000477
CDS Infomation

pacid=37440458 polypeptide=PGSC0003DMP400000360 locus=PGSC0003DMG400000164 ID=PGSC0003DMT400000477.v4.03 annot-version=v4.03
Sequence

ATGTACTGCTGCCCACTCTCACCTTCAAAACAGAGTCCTTATTCATCTACTCATTTTCTT
TCCCCTTCAGCGACATATTTTGGGATTTGTAATGCAAGCAAAAGGGTGTCCATTTCTCTA
ATTAATTTGGGAAATGAATCAAAGGAATCGGTTTCTACTTCGAGACTAAATTATGGGTTC
CTTCGTGCAACCAAAAGGGTGTCTGTTTCAGTGACTAGTTTGGGAAATGGGGATCGTTTG
GTCAATGTTAGGTGTGGAGAGTCGGCTGTGGAGCATGATGATGGGTTTTATATAAGAAGG
TGTGTGGAGATTGCTAGGAAAGCAGTTGGGCATACCAGTCCTAATCCTATGGTTGGGTGT
GTAATTGTTAAGGATGGGAAGATTGTAGGTGAAGGTTTTCACCCAAAAGCTGGCCAGCCA
CATGCTGAGGTTTTTGCACTCCGAGATGCTGGTGATTTTGCAGAAAATGCAACAGCCTTT
GTGAGCTTGGAACCATGTAATCATTATGGAAGAACTCCACCTTGTACTGAGGCATTAATC
AAGGCCAAAGTGAAAAAGGTGGTTGTCGGGATGGTGGATCCAAATCCTATTGTAGCTTCA
ACTGGTGTAAGTAGATTAAGAGATGAAGGAATTGAAGTGATCACAGGTGTTGAAGAAGAA
CTCTGCAGGAAGCTTAATGAAGCTTATATACATCAAATGTTGACCGGAAAGCCATTTGTC
ACACTCAGGTACTCTCTCTCAGTTGATGGTGATCTCTTGGATCAGCTGGGTGCAGAAGTC
ACGGAGTCTGGTGGATACTATTCAAAATTGTTACAAGAATATGATGCAGTTGTTGTTTCT
TCCTTCGTGCTGTCAACAAAGCATTCTGTTCTTTCATCTAAAGAACCAGGAGCAAAGCAA
CCTCTTCAGATAGTATTAGCAAAAAGTTCAGGTTCACTACAACTCCCTGCCGTTACAGCG
ATATCATCTAAAACTATAATCTTTAGTGATGAGGAGATTGTTATGGAGCTTGAAGCAAGT
CAAAGAGGGATAGAGACAGTAGTTTTGGATAGGATGAATTTAACAGCTATCCTTGAACAT
TGCAAGCGTCAAGGACTGTGCAGTGTGATGCTGGATTTGAGAGGAAACTCTGCAGAATTT
GAGGAAATCCTGCAAGAGGGTTTTGAACAAAATTTGTTTCAGAAGGTTATTGTGGAAATG
TTGCCAATTTTGGGTGCAGGTTATAAAGAGGCTTTCAAATATATGCAGCAAAACCGAAGG
CTGAAGAATTTAACATCGAGGACCTTAGGCGAAAGTATTCTTCTGGAAGGATATTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000360
PEP Infomation

pacid=37440458 transcript=PGSC0003DMT400000477 locus=PGSC0003DMG400000164 ID=PGSC0003DMT400000477.v4.03 annot-version=v4.03
Sequence

MYCCPLSPSKQSPYSSTHFLSPSATYFGICNASKRVSISLINLGNESKESVSTSRLNYGF
LRATKRVSVSVTSLGNGDRLVNVRCGESAVEHDDGFYIRRCVEIARKAVGHTSPNPMVGC
VIVKDGKIVGEGFHPKAGQPHAEVFALRDAGDFAENATAFVSLEPCNHYGRTPPCTEALI
KAKVKKVVVGMVDPNPIVASTGVSRLRDEGIEVITGVEEELCRKLNEAYIHQMLTGKPFV
TLRYSLSVDGDLLDQLGAEVTESGGYYSKLLQEYDAVVVSSFVLSTKHSVLSSKEPGAKQ
PLQIVLAKSSGSLQLPAVTAISSKTIIFSDEEIVMELEASQRGIETVVLDRMNLTAILEH
CKRQGLCSVMLDLRGNSAEFEEILQEGFEQNLFQKVIVEMLPILGAGYKEAFKYMQQNRR
LKNLTSRTLGESILLEGYF*

Transcript Sequence

Transcript ID

PGSC0003DMT400000477
Transcript Infomation

pacid=37440458 locus=PGSC0003DMG400000164 ID=PGSC0003DMT400000477.v4.03 annot-version=v4.03
Sequence

ATGTACTGCTGCCCACTCTCACCTTCAAAACAGAGTCCTTATTCATCTACTCATTTTCTT
TCCCCTTCAGCGACATATTTTGGGATTTGTAATGCAAGCAAAAGGGTGTCCATTTCTCTA
ATTAATTTGGGAAATGAATCAAAGGAATCGGTTTCTACTTCGAGACTAAATTATGGGTTC
CTTCGTGCAACCAAAAGGGTGTCTGTTTCAGTGACTAGTTTGGGAAATGGGGATCGTTTG
GTCAATGTTAGGTGTGGAGAGTCGGCTGTGGAGCATGATGATGGGTTTTATATAAGAAGG
TGTGTGGAGATTGCTAGGAAAGCAGTTGGGCATACCAGTCCTAATCCTATGGTTGGGTGT
GTAATTGTTAAGGATGGGAAGATTGTAGGTGAAGGTTTTCACCCAAAAGCTGGCCAGCCA
CATGCTGAGGTTTTTGCACTCCGAGATGCTGGTGATTTTGCAGAAAATGCAACAGCCTTT
GTGAGCTTGGAACCATGTAATCATTATGGAAGAACTCCACCTTGTACTGAGGCATTAATC
AAGGCCAAAGTGAAAAAGGTGGTTGTCGGGATGGTGGATCCAAATCCTATTGTAGCTTCA
ACTGGTGTAAGTAGATTAAGAGATGAAGGAATTGAAGTGATCACAGGTGTTGAAGAAGAA
CTCTGCAGGAAGCTTAATGAAGCTTATATACATCAAATGTTGACCGGAAAGCCATTTGTC
ACACTCAGGTACTCTCTCTCAGTTGATGGTGATCTCTTGGATCAGCTGGGTGCAGAAGTC
ACGGAGTCTGGTGGATACTATTCAAAATTGTTACAAGAATATGATGCAGTTGTTGTTTCT
TCCTTCGTGCTGTCAACAAAGCATTCTGTTCTTTCATCTAAAGAACCAGGAGCAAAGCAA
CCTCTTCAGATAGTATTAGCAAAAAGTTCAGGTTCACTACAACTCCCTGCCGTTACAGCG
ATATCATCTAAAACTATAATCTTTAGTGATGAGGAGATTGTTATGGAGCTTGAAGCAAGT
CAAAGAGGGATAGAGACAGTAGTTTTGGATAGGATGAATTTAACAGCTATCCTTGAACAT
TGCAAGCGTCAAGGACTGTGCAGTGTGATGCTGGATTTGAGAGGAAACTCTGCAGAATTT
GAGGAAATCCTGCAAGAGGGTTTTGAACAAAATTTGTTTCAGAAGGTTATTGTGGAAATG
TTGCCAATTTTGGGTGCAGGTTATAAAGAGGCTTTCAAATATATGCAGCAAAACCGAAGG
CTGAAGAATTTAACATCGAGGACCTTAGGCGAAAGTATTCTTCTGGAAGGATATTTCTAA