Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000459
CDS Infomation

pacid=37438722 polypeptide=PGSC0003DMP400000349 locus=PGSC0003DMG400000156 ID=PGSC0003DMT400000459.v4.03 annot-version=v4.03
Sequence

ATGGGTGCAAATGATCCATTTGGCGCTCGGGATGAAGTTTTACGACTTGCAAGCGGACTG
GGCATCTCTATAACTGTTGGTCTGGCTCATCAAGTTGCTGTTGTCAGATCAGATTTGGAG
GAGCACCTTAAACATGTTGATGATGTTAGTGTGTATCTAGGAGCAGCTCCTATTGTTGAA
TGTCTTCAGAATTTCAGACCGAATGTAATTATTACTTCTCGAGTTGCTGATGCTTCCTTA
TTCTTAGCCCCAATGGTGTATGAGCTCGGTTGGAACTGGGATGACTTGCACCTGCTTGCC
CAAGGTTCACTGGCTGGCCACCTGCTAGAATGTGGTTGCCAACTTACTGGAGGATACTAT
ATGCATCCAGGAGATAAATACCGTGATATATCTCTGCAAGATCTCCTAGATTTATCTCTT
CCTTTTGCGGAAGTTAGCTTTGATGGGAAAGTATGTGTAGCAAAGGCGGAAAGCAGTGGT
GGGGTTTTGAATCCCTGCACGTGTGCTGAGCAGCTTCTGTATGAAGTGGGGAATCCTAGT
AGCTACATAACCCCAGACGTGGTTGTAGATTTTCAAGATGTTTCATTTCAGACATTATCA
AGCAGTAAAGTTCTCTGTGCTGGGGCAAAACCATCTGCAGCAGCTCCTAATAATCTGTTG
CTGCTGGCCTCCAAGGACAAGGGGTGGAAGGGCTGGGGAGAGATATCCTATGGTGGATAT
CAGTGTGTTAAACGTGCTAAAGCTGCTGATTTTTTGGTAAGATCATGGATGGAAGAAGTA
TACCCTGGCATAAGCAAACATATAGTTTCCTATATCATTGGACTGGATAGCCTGAAAGCT
GTTAGCATAGATGAAGATTTGCCAAGGGATAGTCAAGATATTAGATTACGAATGGATGGT
TTATTTGAGAATAAGGAACAAGCAATCCACTTTACAAAAGAGTTCATAGCATTATATACA
AATGGACCTGCTGGTGGTGGCGGTATCAGCACTGGACACAAAAAAGACATCATTCTTGAG
AAAGCACTGGTAAAACGTAAAGATGTTCAGTGGCATATGACAGCAACAAGAAATAAAATT
ATGCAATCAGATGATCTGGCTAGCCCTAAAAACATAATACAGACCAGTTCATTCCATGAA
TCAGTCTTGCAATCACTTACAATGGAAACTACTTTGAATCACAAAGAAGGTTCACCGCAA
ATTGAGCTGATCTCCCCTGCTCCACATGACAGGAAGATTCCTCTTTATGATTTTGCACAT
AGCAGAGCTGGTGATAAAGGGGATGATATAAACTTTTCCCTTATCCCATATTTTCCTCCA
GATATTGAAAGGCTTAAGAAGATTGTAACTCAAGAATGGGTGAAAAAAGTTGTCTCAAGT
CTTCTTAATCCCTCTTCTTTTCCCACTTCTGATGATATTGAACAAAGAAACAAATGGATC
AGTGAACATGTTGAAGTGGAGATTTATGAAGTCAGAGGGATCCATTCTTTGAATATAGTG
GTTCGTAATATCCTAGATGGAGGTGTGAACTGCTCAAGGAGAATCGATAGGCATGGAAAG
ACTCTATCCGATCTCATATTGTGCCAGAAAGTGTTATTGCCTCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000349
PEP Infomation

pacid=37438722 transcript=PGSC0003DMT400000459 locus=PGSC0003DMG400000156 ID=PGSC0003DMT400000459.v4.03 annot-version=v4.03
Sequence

MGANDPFGARDEVLRLASGLGISITVGLAHQVAVVRSDLEEHLKHVDDVSVYLGAAPIVE
CLQNFRPNVIITSRVADASLFLAPMVYELGWNWDDLHLLAQGSLAGHLLECGCQLTGGYY
MHPGDKYRDISLQDLLDLSLPFAEVSFDGKVCVAKAESSGGVLNPCTCAEQLLYEVGNPS
SYITPDVVVDFQDVSFQTLSSSKVLCAGAKPSAAAPNNLLLLASKDKGWKGWGEISYGGY
QCVKRAKAADFLVRSWMEEVYPGISKHIVSYIIGLDSLKAVSIDEDLPRDSQDIRLRMDG
LFENKEQAIHFTKEFIALYTNGPAGGGGISTGHKKDIILEKALVKRKDVQWHMTATRNKI
MQSDDLASPKNIIQTSSFHESVLQSLTMETTLNHKEGSPQIELISPAPHDRKIPLYDFAH
SRAGDKGDDINFSLIPYFPPDIERLKKIVTQEWVKKVVSSLLNPSSFPTSDDIEQRNKWI
SEHVEVEIYEVRGIHSLNIVVRNILDGGVNCSRRIDRHGKTLSDLILCQKVLLPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400000459
Transcript Infomation

pacid=37438722 locus=PGSC0003DMG400000156 ID=PGSC0003DMT400000459.v4.03 annot-version=v4.03
Sequence

ATGGGTGCAAATGATCCATTTGGCGCTCGGGATGAAGTTTTACGACTTGCAAGCGGACTG
GGCATCTCTATAACTGTTGGTCTGGCTCATCAAGTTGCTGTTGTCAGATCAGATTTGGAG
GAGCACCTTAAACATGTTGATGATGTTAGTGTGTATCTAGGAGCAGCTCCTATTGTTGAA
TGTCTTCAGAATTTCAGACCGAATGTAATTATTACTTCTCGAGTTGCTGATGCTTCCTTA
TTCTTAGCCCCAATGGTGTATGAGCTCGGTTGGAACTGGGATGACTTGCACCTGCTTGCC
CAAGGTTCACTGGCTGGCCACCTGCTAGAATGTGGTTGCCAACTTACTGGAGGATACTAT
ATGCATCCAGGAGATAAATACCGTGATATATCTCTGCAAGATCTCCTAGATTTATCTCTT
CCTTTTGCGGAAGTTAGCTTTGATGGGAAAGTATGTGTAGCAAAGGCGGAAAGCAGTGGT
GGGGTTTTGAATCCCTGCACGTGTGCTGAGCAGCTTCTGTATGAAGTGGGGAATCCTAGT
AGCTACATAACCCCAGACGTGGTTGTAGATTTTCAAGATGTTTCATTTCAGACATTATCA
AGCAGTAAAGTTCTCTGTGCTGGGGCAAAACCATCTGCAGCAGCTCCTAATAATCTGTTG
CTGCTGGCCTCCAAGGACAAGGGGTGGAAGGGCTGGGGAGAGATATCCTATGGTGGATAT
CAGTGTGTTAAACGTGCTAAAGCTGCTGATTTTTTGGTAAGATCATGGATGGAAGAAGTA
TACCCTGGCATAAGCAAACATATAGTTTCCTATATCATTGGACTGGATAGCCTGAAAGCT
GTTAGCATAGATGAAGATTTGCCAAGGGATAGTCAAGATATTAGATTACGAATGGATGGT
TTATTTGAGAATAAGGAACAAGCAATCCACTTTACAAAAGAGTTCATAGCATTATATACA
AATGGACCTGCTGGTGGTGGCGGTATCAGCACTGGACACAAAAAAGACATCATTCTTGAG
AAAGCACTGGTAAAACGTAAAGATGTTCAGTGGCATATGACAGCAACAAGAAATAAAATT
ATGCAATCAGATGATCTGGCTAGCCCTAAAAACATAATACAGACCAGTTCATTCCATGAA
TCAGTCTTGCAATCACTTACAATGGAAACTACTTTGAATCACAAAGAAGGTTCACCGCAA
ATTGAGCTGATCTCCCCTGCTCCACATGACAGGAAGATTCCTCTTTATGATTTTGCACAT
AGCAGAGCTGGTGATAAAGGGGATGATATAAACTTTTCCCTTATCCCATATTTTCCTCCA
GATATTGAAAGGCTTAAGAAGATTGTAACTCAAGAATGGGTGAAAAAAGTTGTCTCAAGT
CTTCTTAATCCCTCTTCTTTTCCCACTTCTGATGATATTGAACAAAGAAACAAATGGATC
AGTGAACATGTTGAAGTGGAGATTTATGAAGTCAGAGGGATCCATTCTTTGAATATAGTG
GTTCGTAATATCCTAGATGGAGGTGTGAACTGCTCAAGGAGAATCGATAGGCATGGAAAG
ACTCTATCCGATCTCATATTGTGCCAGAAAGTGTTATTGCCTCTGTAA