Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000447
CDS Infomation

pacid=37437282 polypeptide=PGSC0003DMP400000338 locus=PGSC0003DMG400000152 ID=PGSC0003DMT400000447.v4.03 annot-version=v4.03
Sequence

ATGGCGTCATCTCCGATAACAATGATGAAGATGAAGTTAAACAACTGCTCACCGCCGTCA
ACCGCCGCCGCAGCTCGGTTTTTACCACTTCTTGGCCCCCACCAAATTCGCTTCCGTTCC
TCTCTGGCTCCCTTTCACAACCCATCTTTTCCCAGAACCATCATCACTCGTCCAACGTTT
TCCTCTTCCTCCATCATTACTGCTGCAATGGCTAGTGAGGCATCGGTAAAAGTGATTGAT
GGGAAAAAAGTTGCAAAAGATGTCAGAGATGAAATAAATGCCGAAATAACTAGGATGAAA
GATTCGATTGGTGTTGTTCCTGGCCTGGCAGTTATACTTGTTGGGGATAGGAAAGATTCT
GCAACTTATGTTCGCAACAAGAAAAAAGCTTGTGAAGCTGCTGGGATCAAATCCTATGAA
GTGTGTTTGCCTGAGAACTCAACAGAAGAAGAAGTTCTCAAGTATATTTCAGACTTCAAT
GATGATCCTATGGTTCATGGAATTCTTGTTCAGCTACCATTACCTTCGCATATGGATGAG
GAGAAAATCCTACATGCTGTTTGCATTGAGAAGGATGTGGATGGATTCCACCCACTAAAT
ATTGGCCAGCTTGCGATGCGAGGTAGAGAGCCCTTATTTGTCCCCTGTACACCCAAAGGA
TGCATTGAGCTTCTTCACCGGTACAATGTGGAAATCAAGGGGAAAAAGGCGGTTGTCATT
GGCAGGAGCAATATAGTTGGAATGCCTGCTGCCTTGCTGCTGCAGAGGGAAGATGCCACC
GTCAGCATTGTTCATTCCAGAACCAAGAACCCAGAGGAGATCACAAGACAAGCAGATATC
ATAATAGCAGCTGTAGGGAAACCAAACATGGTTAGAGGTAGCTGGATCAAGCCTGGGGCC
GTAATTATTGATGTCGGGATTAATCCTGTGGAGGATGCTACAAATCCTCGAGGCTATCGA
CTAGTTGGAGATGTTTGTTATGAGGAGGCCATCAAGGTTGCTTCAGCTATTACTCCTGTT
CCTGGAGGAGTTGGGCCCATGACTATAGCAATGCTTCTCTCCAATACTTTGTTATCAGCA
AAGCGAATCAACAACTTCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000338
PEP Infomation

pacid=37437282 transcript=PGSC0003DMT400000447 locus=PGSC0003DMG400000152 ID=PGSC0003DMT400000447.v4.03 annot-version=v4.03
Sequence

MASSPITMMKMKLNNCSPPSTAAAARFLPLLGPHQIRFRSSLAPFHNPSFPRTIITRPTF
SSSSIITAAMASEASVKVIDGKKVAKDVRDEINAEITRMKDSIGVVPGLAVILVGDRKDS
ATYVRNKKKACEAAGIKSYEVCLPENSTEEEVLKYISDFNDDPMVHGILVQLPLPSHMDE
EKILHAVCIEKDVDGFHPLNIGQLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKKAVVI
GRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRQADIIIAAVGKPNMVRGSWIKPGA
VIIDVGINPVEDATNPRGYRLVGDVCYEEAIKVASAITPVPGGVGPMTIAMLLSNTLLSA
KRINNFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400000447
Transcript Infomation

pacid=37437282 locus=PGSC0003DMG400000152 ID=PGSC0003DMT400000447.v4.03 annot-version=v4.03
Sequence

ATGGCGTCATCTCCGATAACAATGATGAAGATGAAGTTAAACAACTGCTCACCGCCGTCA
ACCGCCGCCGCAGCTCGGTTTTTACCACTTCTTGGCCCCCACCAAATTCGCTTCCGTTCC
TCTCTGGCTCCCTTTCACAACCCATCTTTTCCCAGAACCATCATCACTCGTCCAACGTTT
TCCTCTTCCTCCATCATTACTGCTGCAATGGCTAGTGAGGCATCGGTAAAAGTGATTGAT
GGGAAAAAAGTTGCAAAAGATGTCAGAGATGAAATAAATGCCGAAATAACTAGGATGAAA
GATTCGATTGGTGTTGTTCCTGGCCTGGCAGTTATACTTGTTGGGGATAGGAAAGATTCT
GCAACTTATGTTCGCAACAAGAAAAAAGCTTGTGAAGCTGCTGGGATCAAATCCTATGAA
GTGTGTTTGCCTGAGAACTCAACAGAAGAAGAAGTTCTCAAGTATATTTCAGACTTCAAT
GATGATCCTATGGTTCATGGAATTCTTGTTCAGCTACCATTACCTTCGCATATGGATGAG
GAGAAAATCCTACATGCTGTTTGCATTGAGAAGGATGTGGATGGATTCCACCCACTAAAT
ATTGGCCAGCTTGCGATGCGAGGTAGAGAGCCCTTATTTGTCCCCTGTACACCCAAAGGA
TGCATTGAGCTTCTTCACCGGTACAATGTGGAAATCAAGGGGAAAAAGGCGGTTGTCATT
GGCAGGAGCAATATAGTTGGAATGCCTGCTGCCTTGCTGCTGCAGAGGGAAGATGCCACC
GTCAGCATTGTTCATTCCAGAACCAAGAACCCAGAGGAGATCACAAGACAAGCAGATATC
ATAATAGCAGCTGTAGGGAAACCAAACATGGTTAGAGGTAGCTGGATCAAGCCTGGGGCC
GTAATTATTGATGTCGGGATTAATCCTGTGGAGGATGCTACAAATCCTCGAGGCTATCGA
CTAGTTGGAGATGTTTGTTATGAGGAGGCCATCAAGGTTGCTTCAGCTATTACTCCTGTT
CCTGGAGGAGTTGGGCCCATGACTATAGCAATGCTTCTCTCCAATACTTTGTTATCAGCA
AAGCGAATCAACAACTTCAAGTGA