Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000440
CDS Infomation

pacid=37436021 polypeptide=PGSC0003DMP400000332 locus=PGSC0003DMG400000149 ID=PGSC0003DMT400000440.v4.03 annot-version=v4.03
Sequence

ATGGATGTTCTTTATACCATCTTCATCTCTATAGCTATTCTCTTGTTCATTTGTGTGACT
CCTTTATTAATTTTAATAGTAAGGATCTATGCTGGCAAGTCAATCAGAAACCCCAAATAT
GCACCAGTGGAGGGGACTGTGTTCCATCAGCTTTTATACTTCAACAGAGTCTATGATTAT
CAAACAGAATTGGCTAAAAAGACCCCTACTTTCCGGTTTCTGGCGCCGGAGCAGAGTGAA
ACATATACCACTGATTCAAGAAATATTGAGTACATTCTTAAGACAAACTTTAGTAAGTAC
TCTAAAGGAAAGCGAAATCAAGAGGTTATAATGGATTTGTTTGGTGAAGGGATTTTCGCG
GTGGATGGTGAGAAATGGAAGCAACAGAGAAAGCTTGCAAGTTTTGAGTTCTCAGCTAGA
GTATTGAGAGACTTTAGCTGCAAAGTTTTCAGAAAAGGAGCAACCAAGTTGGTGAGCAAG
GTTTCTGAGTTATCTCTTGCCAACCAAGTTTTTGATATGCAAGAACTGCTAATGAGATGT
TCCCTGGAATCAATATTCAAAGTTGGCTTTGGAGTTGATCTGAACTGCCTGGAAGGATCA
AGTGGAGATGATAACAAATTCATCAAGGCCTTTGATGATTCAAATGCATTGTCATATTGG
CGTTATGTCGATCCATTCTGGAAGCTTAAGAGATACTTCAACATCGGCTCTGAATTTCTT
CTGAAAAAGAACATCAAGTTCATTCAAGAATTCGTTGATGAATTGATTAGAACAAGGCGC
AAACAGCTAGAAATGAAACAAGATTCTATGGATAAGGAGGACATACTCTCAAGGTTTCTG
GTAGAGAGCAAGAAGGATCCAGAAAAAATGACTAATCGGTATCTCAGAGATATTATACTG
AATTTCATGCTTGCTGGCAAAGATAGTACTGCTAATACTCTTTCATGGTTTTTCTATGTG
CTTTGCAAGAACCCCTTAATCCAAATAAAGATTGTTGAGGAAATAAGAGAAGTTATTGAT
AATAACATGAAGGATAATGGAAGTGTGGATGATTTTGTAGCAAGTATTACAGAAGAGGTC
CTCGAGAAAATGCATTATCTTCATGCAACATTGACAGAGACCTTGAGGCTATACCCTGCT
GTCCCAGTGGATGGCAGGTGTGCAGATGCAGATGATGTTCTTCCTGATGGCTTTCACATC
AAGAAAGGGGATGGGGTTTATTATATGTCCTATGCAATGGGGAGGATGCCTTACGTTTGG
GGGGATGATGCTGAGGATTTCCGACCAGAAAGATGGTTGAAAGATGGGATTTTCCAGCCA
GAGTCACCATTCAAATTCATAGCATTTCATGCTGGTCCAAGATTATGTCTAGGCAAAGAT
TTTGCTTATCGGAAAATGAAGATAGTATCAATGGCTCTTCTCCATTTCTTCAGGTTCAAA
TTATCCGATGACACGAAAGAAGTAACTTATAGAACCATGTTTACACTCCACATCAAAGAA
GGGCTGCAGGTTCGTGCAGTTCCAAGAAGAGGATTAGTAGAAGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000332
PEP Infomation

pacid=37436021 transcript=PGSC0003DMT400000440 locus=PGSC0003DMG400000149 ID=PGSC0003DMT400000440.v4.03 annot-version=v4.03
Sequence

MDVLYTIFISIAILLFICVTPLLILIVRIYAGKSIRNPKYAPVEGTVFHQLLYFNRVYDY
QTELAKKTPTFRFLAPEQSETYTTDSRNIEYILKTNFSKYSKGKRNQEVIMDLFGEGIFA
VDGEKWKQQRKLASFEFSARVLRDFSCKVFRKGATKLVSKVSELSLANQVFDMQELLMRC
SLESIFKVGFGVDLNCLEGSSGDDNKFIKAFDDSNALSYWRYVDPFWKLKRYFNIGSEFL
LKKNIKFIQEFVDELIRTRRKQLEMKQDSMDKEDILSRFLVESKKDPEKMTNRYLRDIIL
NFMLAGKDSTANTLSWFFYVLCKNPLIQIKIVEEIREVIDNNMKDNGSVDDFVASITEEV
LEKMHYLHATLTETLRLYPAVPVDGRCADADDVLPDGFHIKKGDGVYYMSYAMGRMPYVW
GDDAEDFRPERWLKDGIFQPESPFKFIAFHAGPRLCLGKDFAYRKMKIVSMALLHFFRFK
LSDDTKEVTYRTMFTLHIKEGLQVRAVPRRGLVEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400000440
Transcript Infomation

pacid=37436021 locus=PGSC0003DMG400000149 ID=PGSC0003DMT400000440.v4.03 annot-version=v4.03
Sequence

ATGGATGTTCTTTATACCATCTTCATCTCTATAGCTATTCTCTTGTTCATTTGTGTGACT
CCTTTATTAATTTTAATAGTAAGGATCTATGCTGGCAAGTCAATCAGAAACCCCAAATAT
GCACCAGTGGAGGGGACTGTGTTCCATCAGCTTTTATACTTCAACAGAGTCTATGATTAT
CAAACAGAATTGGCTAAAAAGACCCCTACTTTCCGGTTTCTGGCGCCGGAGCAGAGTGAA
ACATATACCACTGATTCAAGAAATATTGAGTACATTCTTAAGACAAACTTTAGTAAGTAC
TCTAAAGGAAAGCGAAATCAAGAGGTTATAATGGATTTGTTTGGTGAAGGGATTTTCGCG
GTGGATGGTGAGAAATGGAAGCAACAGAGAAAGCTTGCAAGTTTTGAGTTCTCAGCTAGA
GTATTGAGAGACTTTAGCTGCAAAGTTTTCAGAAAAGGAGCAACCAAGTTGGTGAGCAAG
GTTTCTGAGTTATCTCTTGCCAACCAAGTTTTTGATATGCAAGAACTGCTAATGAGATGT
TCCCTGGAATCAATATTCAAAGTTGGCTTTGGAGTTGATCTGAACTGCCTGGAAGGATCA
AGTGGAGATGATAACAAATTCATCAAGGCCTTTGATGATTCAAATGCATTGTCATATTGG
CGTTATGTCGATCCATTCTGGAAGCTTAAGAGATACTTCAACATCGGCTCTGAATTTCTT
CTGAAAAAGAACATCAAGTTCATTCAAGAATTCGTTGATGAATTGATTAGAACAAGGCGC
AAACAGCTAGAAATGAAACAAGATTCTATGGATAAGGAGGACATACTCTCAAGGTTTCTG
GTAGAGAGCAAGAAGGATCCAGAAAAAATGACTAATCGGTATCTCAGAGATATTATACTG
AATTTCATGCTTGCTGGCAAAGATAGTACTGCTAATACTCTTTCATGGTTTTTCTATGTG
CTTTGCAAGAACCCCTTAATCCAAATAAAGATTGTTGAGGAAATAAGAGAAGTTATTGAT
AATAACATGAAGGATAATGGAAGTGTGGATGATTTTGTAGCAAGTATTACAGAAGAGGTC
CTCGAGAAAATGCATTATCTTCATGCAACATTGACAGAGACCTTGAGGCTATACCCTGCT
GTCCCAGTGGATGGCAGGTGTGCAGATGCAGATGATGTTCTTCCTGATGGCTTTCACATC
AAGAAAGGGGATGGGGTTTATTATATGTCCTATGCAATGGGGAGGATGCCTTACGTTTGG
GGGGATGATGCTGAGGATTTCCGACCAGAAAGATGGTTGAAAGATGGGATTTTCCAGCCA
GAGTCACCATTCAAATTCATAGCATTTCATGCTGGTCCAAGATTATGTCTAGGCAAAGAT
TTTGCTTATCGGAAAATGAAGATAGTATCAATGGCTCTTCTCCATTTCTTCAGGTTCAAA
TTATCCGATGACACGAAAGAAGTAACTTATAGAACCATGTTTACACTCCACATCAAAGAA
GGGCTGCAGGTTCGTGCAGTTCCAAGAAGAGGATTAGTAGAAGCATGA