Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000391
CDS Infomation

pacid=37439191 polypeptide=PGSC0003DMP400000304 locus=PGSC0003DMG400000140 ID=PGSC0003DMT400000391.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAGAAAATCCATTTTCACCTCCCCTAACACCCCTTCCTGTTTTTCCGACCACC
TACCTCATACCCCCACCCCCACCACCCTCCTCCAACCATCACCATTCTCATTCTCCTCTC
ATCCCACCATTCATAGCTGCTGCTTTTGCCTTAACTTTCTTCATTGTTGCTGCTATCATT
TACCGCAAAGTGTCACGCAACAGGACTGTTCCTGCAGATCTGAAGTCACCTCCACCACCT
CACAAGTTTACCTACTCAGTCCTCCGTCGTGCTACGGGGTCATTTACAGCTGCTAATCGT
CTTGGACAAGGTGGATTTGGGTCTGTTTACAAAGGTGTTCTTCCATCTGGACAGGAGGTA
GCTGTGAAGCTCATGGATGCTTCCGGCTCCCTCCAGGGCGAGAGAGAGTTTCACAATGAA
CTCACTCTCGCCTCGAGGATAGACACTACGTCTTGCCACTACGTAGTGCCTATCCTCGGA
TTCTCCTCCGATGAACATAGTTATAAACACCACTGTTCTAGTCGGCGGAGGAGAAGATTA
GTTCTTGTTTATGAGTATATGCGTAATGGGAGTCTGCAAGATGCTTTGTTAGATCGAAAG
TGTCCTGAGTTAATGCAATGGAGAAAGAGATTTGATATTATAAGTTCCATTGCAAAGGGT
GTTGAGTATCTTCATTACTCGTGTGATCCTCCTATAGTACATGGGGATATCAAGCCCTCT
AATATATTGTTGGATTACCATTTTGATGCAAAAATAGCTGACTTTGGCCTTGCACAGTCT
TTGATTAAAGATGATCAAGTTGTCGAGTCTTTCATTGAAGATGACGAGAAAGTTGAAAAG
GGGGCAAAAGGAGAAGTTTTTGAGAATGTGGAGGAAAATGGGTCGATTCTTGAAGGAAAT
GAGAGTGTGGTCACAGATGAGGTTGTGATCAATGTGGATCAGTTGCCGGAGAGTTGTTGT
GTGAGAGTGTTGGATGGGGAAGTGGGAGGGGTGTCACCTGAGGTGGGAGTTCCATCAGAG
GGGATCGAAAAGACTAGTGTTTCTGAGGGTTTTTTCGACGGGGTTAGTGTGGATAGTGGA
GTTTTGAAAGGGATTGGGAGGGGAACTAGTCAATCAGGTAGAGATTGGTGGTGGAAACAG
GACAATGTGAATGGTGGATCAGATTCTGGTAGGATTAAGGACTATGTGATGGAATGGATT
GGTAGTGAGATCAGAAAAGAGAGGCCTAAGAAGGATTGGATCGCAACCACGAGTGCAGCA
GAAGACATTGCCAAAGGGGGGCAACAGAAGCAAAGAAAGAAGCTTGAATGGTGGGCATCT
TTGGATGAGGAGAGAACGAAGAGAGAAAAGAAGAATAGGAAGCCAAGAGAATGGTGGAAG
GAAGAGTTCTGTGAGGAGTTAGCCAAGAAAAAGAAGAAAAGGGATCTCAAAAGTGGAGAA
ATGTGGTGGCAAAGGGATGAAGAGGTAGCGCCAGAAAGAAAGAGGAGGAAAAGCAAGGGA
AGTAGGAGCAGCATTGATTGGTGGCTTGATAGTTTCAGTGGCGAGTTTCGGATTGGAAGA
CGAAGTAGTCAAGATTTTGCCAGTGGAGATATTCCTAAGAGTGGAGGTGTGAGTAGTACC
CCTAGTATGAGAGGAACAGTTTGTTACATCGCTCCAGAGTATGGCGGTGGAGGGCAGCTC
TCAGAGAAATGCGACGTGTACAGTTTTGGCGTTTTGTTATTGGTTTTGGTCTCAGGGAGA
AGGCCACTCCAAGTTACAGCTTCTCCTATGTCAGAATTTGAGAGGGCTAATCTGGTTTCA
TGGGCTAGGCAGCTTGCTCATTCAGGCAAGCTTTTGGATCTTGTTGATCCCAATATTCAG
TTACTTGATAGAGAACAAGCATTGCTTTGCATCACTATTGCACTACTCTGTTTACAGAGA
TCACCTAACAAGCGCCCAACAATGAAAGAGATTGTTGGGATGCTTTGTGGGGACTCTGAG
CCACCCCATTTGCCGTTTGAGTTTTCCCCTTCACCACCCTCCAATTTCCCTTTCAAGTCA
CGGAAAAAGGCCCGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000304
PEP Infomation

pacid=37439191 transcript=PGSC0003DMT400000391 locus=PGSC0003DMG400000140 ID=PGSC0003DMT400000391.v4.03 annot-version=v4.03
Sequence

MPPENPFSPPLTPLPVFPTTYLIPPPPPPSSNHHHSHSPLIPPFIAAAFALTFFIVAAII
YRKVSRNRTVPADLKSPPPPHKFTYSVLRRATGSFTAANRLGQGGFGSVYKGVLPSGQEV
AVKLMDASGSLQGEREFHNELTLASRIDTTSCHYVVPILGFSSDEHSYKHHCSSRRRRRL
VLVYEYMRNGSLQDALLDRKCPELMQWRKRFDIISSIAKGVEYLHYSCDPPIVHGDIKPS
NILLDYHFDAKIADFGLAQSLIKDDQVVESFIEDDEKVEKGAKGEVFENVEENGSILEGN
ESVVTDEVVINVDQLPESCCVRVLDGEVGGVSPEVGVPSEGIEKTSVSEGFFDGVSVDSG
VLKGIGRGTSQSGRDWWWKQDNVNGGSDSGRIKDYVMEWIGSEIRKERPKKDWIATTSAA
EDIAKGGQQKQRKKLEWWASLDEERTKREKKNRKPREWWKEEFCEELAKKKKKRDLKSGE
MWWQRDEEVAPERKRRKSKGSRSSIDWWLDSFSGEFRIGRRSSQDFASGDIPKSGGVSST
PSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVSGRRPLQVTASPMSEFERANLVS
WARQLAHSGKLLDLVDPNIQLLDREQALLCITIALLCLQRSPNKRPTMKEIVGMLCGDSE
PPHLPFEFSPSPPSNFPFKSRKKAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400000391
Transcript Infomation

pacid=37439191 locus=PGSC0003DMG400000140 ID=PGSC0003DMT400000391.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAGAAAATCCATTTTCACCTCCCCTAACACCCCTTCCTGTTTTTCCGACCACC
TACCTCATACCCCCACCCCCACCACCCTCCTCCAACCATCACCATTCTCATTCTCCTCTC
ATCCCACCATTCATAGCTGCTGCTTTTGCCTTAACTTTCTTCATTGTTGCTGCTATCATT
TACCGCAAAGTGTCACGCAACAGGACTGTTCCTGCAGATCTGAAGTCACCTCCACCACCT
CACAAGTTTACCTACTCAGTCCTCCGTCGTGCTACGGGGTCATTTACAGCTGCTAATCGT
CTTGGACAAGGTGGATTTGGGTCTGTTTACAAAGGTGTTCTTCCATCTGGACAGGAGGTA
GCTGTGAAGCTCATGGATGCTTCCGGCTCCCTCCAGGGCGAGAGAGAGTTTCACAATGAA
CTCACTCTCGCCTCGAGGATAGACACTACGTCTTGCCACTACGTAGTGCCTATCCTCGGA
TTCTCCTCCGATGAACATAGTTATAAACACCACTGTTCTAGTCGGCGGAGGAGAAGATTA
GTTCTTGTTTATGAGTATATGCGTAATGGGAGTCTGCAAGATGCTTTGTTAGATCGAAAG
TGTCCTGAGTTAATGCAATGGAGAAAGAGATTTGATATTATAAGTTCCATTGCAAAGGGT
GTTGAGTATCTTCATTACTCGTGTGATCCTCCTATAGTACATGGGGATATCAAGCCCTCT
AATATATTGTTGGATTACCATTTTGATGCAAAAATAGCTGACTTTGGCCTTGCACAGTCT
TTGATTAAAGATGATCAAGTTGTCGAGTCTTTCATTGAAGATGACGAGAAAGTTGAAAAG
GGGGCAAAAGGAGAAGTTTTTGAGAATGTGGAGGAAAATGGGTCGATTCTTGAAGGAAAT
GAGAGTGTGGTCACAGATGAGGTTGTGATCAATGTGGATCAGTTGCCGGAGAGTTGTTGT
GTGAGAGTGTTGGATGGGGAAGTGGGAGGGGTGTCACCTGAGGTGGGAGTTCCATCAGAG
GGGATCGAAAAGACTAGTGTTTCTGAGGGTTTTTTCGACGGGGTTAGTGTGGATAGTGGA
GTTTTGAAAGGGATTGGGAGGGGAACTAGTCAATCAGGTAGAGATTGGTGGTGGAAACAG
GACAATGTGAATGGTGGATCAGATTCTGGTAGGATTAAGGACTATGTGATGGAATGGATT
GGTAGTGAGATCAGAAAAGAGAGGCCTAAGAAGGATTGGATCGCAACCACGAGTGCAGCA
GAAGACATTGCCAAAGGGGGGCAACAGAAGCAAAGAAAGAAGCTTGAATGGTGGGCATCT
TTGGATGAGGAGAGAACGAAGAGAGAAAAGAAGAATAGGAAGCCAAGAGAATGGTGGAAG
GAAGAGTTCTGTGAGGAGTTAGCCAAGAAAAAGAAGAAAAGGGATCTCAAAAGTGGAGAA
ATGTGGTGGCAAAGGGATGAAGAGGTAGCGCCAGAAAGAAAGAGGAGGAAAAGCAAGGGA
AGTAGGAGCAGCATTGATTGGTGGCTTGATAGTTTCAGTGGCGAGTTTCGGATTGGAAGA
CGAAGTAGTCAAGATTTTGCCAGTGGAGATATTCCTAAGAGTGGAGGTGTGAGTAGTACC
CCTAGTATGAGAGGAACAGTTTGTTACATCGCTCCAGAGTATGGCGGTGGAGGGCAGCTC
TCAGAGAAATGCGACGTGTACAGTTTTGGCGTTTTGTTATTGGTTTTGGTCTCAGGGAGA
AGGCCACTCCAAGTTACAGCTTCTCCTATGTCAGAATTTGAGAGGGCTAATCTGGTTTCA
TGGGCTAGGCAGCTTGCTCATTCAGGCAAGCTTTTGGATCTTGTTGATCCCAATATTCAG
TTACTTGATAGAGAACAAGCATTGCTTTGCATCACTATTGCACTACTCTGTTTACAGAGA
TCACCTAACAAGCGCCCAACAATGAAAGAGATTGTTGGGATGCTTTGTGGGGACTCTGAG
CCACCCCATTTGCCGTTTGAGTTTTCCCCTTCACCACCCTCCAATTTCCCTTTCAAGTCA
CGGAAAAAGGCCCGGTGA