Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000376
CDS Infomation

pacid=37436354 polypeptide=PGSC0003DMP400000290 locus=PGSC0003DMG400000131 ID=PGSC0003DMT400000376.v4.03 annot-version=v4.03
Sequence

ATGGCGACTCCTGAGGAAGCTAAGCTCCACCAGTTTCTTCAATGGCTAGAGTTAAACAGA
GCAGAACTACGTGGTTGCAGAATCAAATACAGTGAATCCAGTAAAGGGTTTGGAATTTTC
TCATCTAATCATGCATCTGATGGGATACTACTGGTGGTTCCATTAGATTTGGCTATAACT
CCAATGAGTGTACTTCAAGATCCTCTTCTTGGACCTGAATGTAGGGCAATGTTTGAGGAA
GGGGAAGTAGATGATAGACTCTTGATTACCTTATTTCTAACCGTGGAGCACCTACGAGAA
AACTCTTCATGGAAGCCGTACTTTGATATGCTTCCAACCACATTCGGAAATCCACTTTGG
TTTTCTGAAGACGAGCTTTTAGAGCTTAAGGGAACCACATTGTATCGGGCTGCTCAGTTG
CAGAAAAAAACATTGCAGTCTTTATTTGATGAAAAGGTGAAGAGGTTGGCTACGAAGCTT
TTAACTCTTGATGGACATCCAGAAAGAGATGTGAAGTTTGAAGACTTCCTTTGGGCAAAC
TCCATATTTTGGAGTCGAGCACTAAATATCCCTTTTCCGCGCTGCTATATATTTCCTATG
GATTCAGAAGGACAAGATAGTGACATTTCTAGCAAAATCGTCAATTCTGCAACACAAACT
AATGGTTGTGGCGGTTTATCTAATGGAGAGTCTGCAAAAGTACCCGAATATGATGCACTC
CAAGATAAAGTTGCTTCTGCTGCTTCCATTTCACAAGGAGAGATAGTTTGGGTGGAAGGT
CTAGTCCCAGGCATTGATTTTTGCAACCATGATTTCAAAGCTGCAGCAACATGGGAAGTT
GATGGAACAGGAGCAACAACTGGAGTTCCTTTCTCCATGTACCTTCTTTCTGCTGGAGAA
AATCCTTCCCTGATTGAGAAAGAGATATCAATTAGCTATGGGAACAAGGGAAATGAGGAA
CTGCTGTACCTGTATGGATTCGTCATGAATGATAATCCTGATGACTACCTCATGGTTCAT
TATCCGGTGGAAGCTATTCAAAACGTTGATTTCTCAGATTCCAAAGCTCAACTTCTTGAA
GCACAGAAAGCTGAATTGAGATGTCTCTTACCCCGAAGTTTGCTAAATCGTGGATTTTTC
CCTCCATCCAACTCATCTGAGGAAGATAAAGATAAACCCGTCAGTAGTCAAGTTTGCAAT
TATAGTTGGAGTGGTCAGCGAAAGACGCCCTCTTACGTGCATAATCTAGTTTTTCCTGCA
AACTTCTTGAATGCATTGAGAACCTTAGCAATGAAAGAAAATGAACTTTATCGTGTTTCT
TCCCTACTTGAGGAGCTTGTTGGATCTGGAGGAGAAAGGCAGCCAACTGACACAGAAGTT
CAAGCAGCAATATGGGAGGCTTGTGGAGATTCTGGAGCTTTACAACTTCTTGTTGATCTG
CTTAACATGAAGATGTTGGATCTAGAAGAGGGTTCAGGAACAGAGGAGAATGACACTGAA
TTACTTGAAAAAGCTTGCACCGCAGAAACCCCAGAAGATTGCAAAGAATCCAGGACCAGT
GACATTGCTCAGAATCATTTGCTGAGTAGAAATAAGCAATCTAGCATAATATACCGGCGG
GGGCAGAAACAACTAACTCGTCTCTTCGTTAAGGAAGCAGAGCACGCGTTGCAATTAGCA
TTGACTGAGGAACTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400000290
PEP Infomation

pacid=37436354 transcript=PGSC0003DMT400000376 locus=PGSC0003DMG400000131 ID=PGSC0003DMT400000376.v4.03 annot-version=v4.03
Sequence

MATPEEAKLHQFLQWLELNRAELRGCRIKYSESSKGFGIFSSNHASDGILLVVPLDLAIT
PMSVLQDPLLGPECRAMFEEGEVDDRLLITLFLTVEHLRENSSWKPYFDMLPTTFGNPLW
FSEDELLELKGTTLYRAAQLQKKTLQSLFDEKVKRLATKLLTLDGHPERDVKFEDFLWAN
SIFWSRALNIPFPRCYIFPMDSEGQDSDISSKIVNSATQTNGCGGLSNGESAKVPEYDAL
QDKVASAASISQGEIVWVEGLVPGIDFCNHDFKAAATWEVDGTGATTGVPFSMYLLSAGE
NPSLIEKEISISYGNKGNEELLYLYGFVMNDNPDDYLMVHYPVEAIQNVDFSDSKAQLLE
AQKAELRCLLPRSLLNRGFFPPSNSSEEDKDKPVSSQVCNYSWSGQRKTPSYVHNLVFPA
NFLNALRTLAMKENELYRVSSLLEELVGSGGERQPTDTEVQAAIWEACGDSGALQLLVDL
LNMKMLDLEEGSGTEENDTELLEKACTAETPEDCKESRTSDIAQNHLLSRNKQSSIIYRR
GQKQLTRLFVKEAEHALQLALTEEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400000376
Transcript Infomation

pacid=37436354 locus=PGSC0003DMG400000131 ID=PGSC0003DMT400000376.v4.03 annot-version=v4.03
Sequence

ATGGCGACTCCTGAGGAAGCTAAGCTCCACCAGTTTCTTCAATGGCTAGAGTTAAACAGA
GCAGAACTACGTGGTTGCAGAATCAAATACAGTGAATCCAGTAAAGGGTTTGGAATTTTC
TCATCTAATCATGCATCTGATGGGATACTACTGGTGGTTCCATTAGATTTGGCTATAACT
CCAATGAGTGTACTTCAAGATCCTCTTCTTGGACCTGAATGTAGGGCAATGTTTGAGGAA
GGGGAAGTAGATGATAGACTCTTGATTACCTTATTTCTAACCGTGGAGCACCTACGAGAA
AACTCTTCATGGAAGCCGTACTTTGATATGCTTCCAACCACATTCGGAAATCCACTTTGG
TTTTCTGAAGACGAGCTTTTAGAGCTTAAGGGAACCACATTGTATCGGGCTGCTCAGTTG
CAGAAAAAAACATTGCAGTCTTTATTTGATGAAAAGGTGAAGAGGTTGGCTACGAAGCTT
TTAACTCTTGATGGACATCCAGAAAGAGATGTGAAGTTTGAAGACTTCCTTTGGGCAAAC
TCCATATTTTGGAGTCGAGCACTAAATATCCCTTTTCCGCGCTGCTATATATTTCCTATG
GATTCAGAAGGACAAGATAGTGACATTTCTAGCAAAATCGTCAATTCTGCAACACAAACT
AATGGTTGTGGCGGTTTATCTAATGGAGAGTCTGCAAAAGTACCCGAATATGATGCACTC
CAAGATAAAGTTGCTTCTGCTGCTTCCATTTCACAAGGAGAGATAGTTTGGGTGGAAGGT
CTAGTCCCAGGCATTGATTTTTGCAACCATGATTTCAAAGCTGCAGCAACATGGGAAGTT
GATGGAACAGGAGCAACAACTGGAGTTCCTTTCTCCATGTACCTTCTTTCTGCTGGAGAA
AATCCTTCCCTGATTGAGAAAGAGATATCAATTAGCTATGGGAACAAGGGAAATGAGGAA
CTGCTGTACCTGTATGGATTCGTCATGAATGATAATCCTGATGACTACCTCATGGTTCAT
TATCCGGTGGAAGCTATTCAAAACGTTGATTTCTCAGATTCCAAAGCTCAACTTCTTGAA
GCACAGAAAGCTGAATTGAGATGTCTCTTACCCCGAAGTTTGCTAAATCGTGGATTTTTC
CCTCCATCCAACTCATCTGAGGAAGATAAAGATAAACCCGTCAGTAGTCAAGTTTGCAAT
TATAGTTGGAGTGGTCAGCGAAAGACGCCCTCTTACGTGCATAATCTAGTTTTTCCTGCA
AACTTCTTGAATGCATTGAGAACCTTAGCAATGAAAGAAAATGAACTTTATCGTGTTTCT
TCCCTACTTGAGGAGCTTGTTGGATCTGGAGGAGAAAGGCAGCCAACTGACACAGAAGTT
CAAGCAGCAATATGGGAGGCTTGTGGAGATTCTGGAGCTTTACAACTTCTTGTTGATCTG
CTTAACATGAAGATGTTGGATCTAGAAGAGGGTTCAGGAACAGAGGAGAATGACACTGAA
TTACTTGAAAAAGCTTGCACCGCAGAAACCCCAGAAGATTGCAAAGAATCCAGGACCAGT
GACATTGCTCAGAATCATTTGCTGAGTAGAAATAAGCAATCTAGCATAATATACCGGCGG
GGGCAGAAACAACTAACTCGTCTCTTCGTTAAGGAAGCAGAGCACGCGTTGCAATTAGCA
TTGACTGAGGAACTCTAG