Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000293
CDS Infomation

pacid=37437487 polypeptide=PGSC0003DMP400000222 locus=PGSC0003DMG400000098 ID=PGSC0003DMT400000293.v4.03 annot-version=v4.03
Sequence

ATGGAACCCAAATTTCTTCTTTCCTCGACAACAAGACCCTTTGCTCCAAATGGAGCTTTT
CCCTTTTCAGTTTCCCAAAAATCATCTTTTATTCAGAAAACTAGAATTTGTCCAGTGACC
CATCTGGCTATATCAGCAGAGCATTTTGGAAAGACTCAAATTTTGGGCAAAAGTTTATCT
TTTGGAGTGAAGAATGAATCTTTATGTAATTTAAGGAAACCCCAGGTAGAAAAGACTCCA
TTTTGGGGCAAAAGTCTATCTTTTAGACAAAAGAATGAATCTTCAGGTAATTTGAGGAAG
GTGCCCAATTTTTCTATTAGAGCAGCTGGTACTGTGAAGAGAAGGAAAGAGCTTCCTTTT
GATAATGTGATTCAAAGGGATAAGAAGCTGAAATTGGTTATGAAGATTAGAAAGATTCTA
GTGAGTCAGCCTGATAGAATTATGTCGCTTCGTGAATTGGGTAGGTATAGAAGAGCATTG
GGTCTGGAGAAGAAAAGGAGATTTATCGGTTTATTGAAGAAATTTCCTGGAGTGTTTGAG
ATTGCAGAAGAAGGGGCTTACTCACTTAAGTTCAAAATGACACCTGAGGCGGAGAGGCTT
TACTTGGAAGAAATGAAGATTAGGAATGAAATGGAGGATTTGTTGGTTATCAAGTTGAGG
AAACTATTGATGATGTCTTTGGACAAACGGATTCTGTTGGAGAAGATTGCACATCTGAAG
ACTGACTTAGGGCTTCCGTTGGAATTTCAAGATACAATCTGCAGGCGATATCCACAATAT
TTCAAGGTAGTTCCAACTGGACGAGGGCCGGCTCTGGAGTTAACTCACTGGGACCCTGAG
CTTGCTGTGTCTGCTGCGCAGATTGCAGAAGAGGAGAATAGGCAAAGAGAGTTGGAAGAG
AAGGATTTGATCATCGATAGACCACCAAGGTTCAATAGGGTGAAGTTGCCTAAGGGTCTT
AAACTTTCAAAAGGTGAGATGAGAAAGATTAGTCAGTTTAGAGATATGCCTTACATTTCT
CCTTACGAGGATTTTTCTGAAATAAGGCCTGGTACTCCGGACAAAGAAAAACACGCATGT
GCTGTGGTTCATGAACTTCTGAGCCTCACAGTTGAGAAAAGGACTCTTGTTGATCACCTT
ACTCATTTTAGGGAAGAATTTAGATTCTCACAACAGCTAAGAGGCATGCTGATAAGGCAT
CCTGATATGTTCTATGTCTCTTTGAAGGGGGAGCGAGACTCAGTTTTTCTCCGTGAAGCT
TATCAGGATTCACACTTGATAGAAAAGAACAGGTTATTGCTCATCAAGGAAAAGCTTCGC
TCCCTTGTTTCCATTTCAAGATCCCGGAGAATCACTCCACAAACTGATTCTGATGAAACA
GAAAAAACTGAGTCCAAATATGGAACTGATGCTGAGGAAGGTGAAGATTGGTCCGACATT
GATAACTTAGGGAGTGATGGATTAGATGAAGATGATGAAGATGATGATGATGACTGGAGT
GATGATGGTGATGATATACCTCCAGACTTCAGTGATGATGAAGGTACCGTTAACCTTGAA
GAGGGCAAACTGACTACACAAGTTAATGGTGCAATGAAGAAGGAAAACAAGGTTCTGGAC
CCTGTTTTTCCAGATGGCCGGCCTCGTGAACGCTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000222
PEP Infomation

pacid=37437487 transcript=PGSC0003DMT400000293 locus=PGSC0003DMG400000098 ID=PGSC0003DMT400000293.v4.03 annot-version=v4.03
Sequence

MEPKFLLSSTTRPFAPNGAFPFSVSQKSSFIQKTRICPVTHLAISAEHFGKTQILGKSLS
FGVKNESLCNLRKPQVEKTPFWGKSLSFRQKNESSGNLRKVPNFSIRAAGTVKRRKELPF
DNVIQRDKKLKLVMKIRKILVSQPDRIMSLRELGRYRRALGLEKKRRFIGLLKKFPGVFE
IAEEGAYSLKFKMTPEAERLYLEEMKIRNEMEDLLVIKLRKLLMMSLDKRILLEKIAHLK
TDLGLPLEFQDTICRRYPQYFKVVPTGRGPALELTHWDPELAVSAAQIAEEENRQRELEE
KDLIIDRPPRFNRVKLPKGLKLSKGEMRKISQFRDMPYISPYEDFSEIRPGTPDKEKHAC
AVVHELLSLTVEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGERDSVFLREA
YQDSHLIEKNRLLLIKEKLRSLVSISRSRRITPQTDSDETEKTESKYGTDAEEGEDWSDI
DNLGSDGLDEDDEDDDDDWSDDGDDIPPDFSDDEGTVNLEEGKLTTQVNGAMKKENKVLD
PVFPDGRPRERW*

Transcript Sequence

Transcript ID

PGSC0003DMT400000293
Transcript Infomation

pacid=37437487 locus=PGSC0003DMG400000098 ID=PGSC0003DMT400000293.v4.03 annot-version=v4.03
Sequence

ATGGAACCCAAATTTCTTCTTTCCTCGACAACAAGACCCTTTGCTCCAAATGGAGCTTTT
CCCTTTTCAGTTTCCCAAAAATCATCTTTTATTCAGAAAACTAGAATTTGTCCAGTGACC
CATCTGGCTATATCAGCAGAGCATTTTGGAAAGACTCAAATTTTGGGCAAAAGTTTATCT
TTTGGAGTGAAGAATGAATCTTTATGTAATTTAAGGAAACCCCAGGTAGAAAAGACTCCA
TTTTGGGGCAAAAGTCTATCTTTTAGACAAAAGAATGAATCTTCAGGTAATTTGAGGAAG
GTGCCCAATTTTTCTATTAGAGCAGCTGGTACTGTGAAGAGAAGGAAAGAGCTTCCTTTT
GATAATGTGATTCAAAGGGATAAGAAGCTGAAATTGGTTATGAAGATTAGAAAGATTCTA
GTGAGTCAGCCTGATAGAATTATGTCGCTTCGTGAATTGGGTAGGTATAGAAGAGCATTG
GGTCTGGAGAAGAAAAGGAGATTTATCGGTTTATTGAAGAAATTTCCTGGAGTGTTTGAG
ATTGCAGAAGAAGGGGCTTACTCACTTAAGTTCAAAATGACACCTGAGGCGGAGAGGCTT
TACTTGGAAGAAATGAAGATTAGGAATGAAATGGAGGATTTGTTGGTTATCAAGTTGAGG
AAACTATTGATGATGTCTTTGGACAAACGGATTCTGTTGGAGAAGATTGCACATCTGAAG
ACTGACTTAGGGCTTCCGTTGGAATTTCAAGATACAATCTGCAGGCGATATCCACAATAT
TTCAAGGTAGTTCCAACTGGACGAGGGCCGGCTCTGGAGTTAACTCACTGGGACCCTGAG
CTTGCTGTGTCTGCTGCGCAGATTGCAGAAGAGGAGAATAGGCAAAGAGAGTTGGAAGAG
AAGGATTTGATCATCGATAGACCACCAAGGTTCAATAGGGTGAAGTTGCCTAAGGGTCTT
AAACTTTCAAAAGGTGAGATGAGAAAGATTAGTCAGTTTAGAGATATGCCTTACATTTCT
CCTTACGAGGATTTTTCTGAAATAAGGCCTGGTACTCCGGACAAAGAAAAACACGCATGT
GCTGTGGTTCATGAACTTCTGAGCCTCACAGTTGAGAAAAGGACTCTTGTTGATCACCTT
ACTCATTTTAGGGAAGAATTTAGATTCTCACAACAGCTAAGAGGCATGCTGATAAGGCAT
CCTGATATGTTCTATGTCTCTTTGAAGGGGGAGCGAGACTCAGTTTTTCTCCGTGAAGCT
TATCAGGATTCACACTTGATAGAAAAGAACAGGTTATTGCTCATCAAGGAAAAGCTTCGC
TCCCTTGTTTCCATTTCAAGATCCCGGAGAATCACTCCACAAACTGATTCTGATGAAACA
GAAAAAACTGAGTCCAAATATGGAACTGATGCTGAGGAAGGTGAAGATTGGTCCGACATT
GATAACTTAGGGAGTGATGGATTAGATGAAGATGATGAAGATGATGATGATGACTGGAGT
GATGATGGTGATGATATACCTCCAGACTTCAGTGATGATGAAGGTACCGTTAACCTTGAA
GAGGGCAAACTGACTACACAAGTTAATGGTGCAATGAAGAAGGAAAACAAGGTTCTGGAC
CCTGTTTTTCCAGATGGCCGGCCTCGTGAACGCTGGTGA