Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000279
CDS Infomation

pacid=37441712 polypeptide=PGSC0003DMP400000212 locus=PGSC0003DMG400000093 ID=PGSC0003DMT400000279.v4.03 annot-version=v4.03
Sequence

ATGCCGGCGTTAGAGGAATTCAGGCAGATAGGAGAGGTAATTGGGAGTCTTAAAGCTCTA
ATGGTATTCCAAGATGACATACAAATAAATCAAAAACAATGTTGTTTGTTAGTGGATATG
CTCAAATGTGCCTACAAGACAATTGCAGAAACAATGAAACAGAACTTGAGATTTGAAGAG
AAGAATATTAAATGGAAAATTCTTGAGAACCCCTTAAGAGAGCTTCTCAGGGTGTTCAAA
GAAGCAGAACAGTACATCAAGCAATCCCTGGAAAATAAGGATTTTTGGGCAAAAGCCATA
GTTCTATATAAGAATACAGATTGTGTTGAATTTCACATCCACAATTTGCTCTCTTGTGTG
CCAATTGTCATCGAGGCCATAGAAATAGCAGGAGAGATTTCAGGTAGTGACCATGACGAG
ATACAGAAGAAGAGATTCATTTACTCGATGAAGTATCAGAAAGAGTGTAAGGACCCACGA
ATCTTCCAATGGAAATTCGGAGAACAGTACATGGTTTCTCAGAAGTTCTGCGAAAGGGTA
TGCTCAGTTTGGAATGAAGACAAGTGGATTTTGCAAAATAAAATTCGAGAGAAGAAGAAT
TTAGGTGCATGTACTTTGACAAAGCATGAGAAACGACTTGCTGATCTCCTCTTGAAAAAC
TTAAACGAGATGGAGATGGAGAGTGATCATAAGCTTTCACCTAGCTCACTTCTTGTAAAT
TCTAAGGATTACCAGGTAAGAAGACGATTAGGTAGTGGAAGTAAGTACAAGGAGATCCAA
TGGTTGGGGGAGACCTTTTGTTTAAGGCATTTGTTTGGGGATATTAAGCCCCTCATTCCA
GATATTTCGCAAGAACTGCATCTCTCTCATCCAAATATAATGCACATCTCCTGTGGTTTT
ACTGACGAAGAAAAGAGAGAATGTTTCTTAATCATGGAACTTATGAGCAAAGATTTATCT
AGTTGCATCAAAGAGATCTGTGGACCAAGAAAGCGTGTACCGTTTTCTCTTCCCGTTGCA
ATCGATTTACTCCTTCAGATTGCAAGAGGCATGGAATACCTACACTCAAAGAAAATCTAT
CATGGTGAATTGAGTCCTTCCAACGTCCTTGTCAAGGCGAGGAACGTATCTACAGAAGGG
TATTTACATGCAAAGGTTTGTGGATTTGGCTCATCGTGTTCTATCAACCTTCCTCAGAAA
GCTAATGTGAATCAAAATAATGGGACACTCCCATTCATTTGGTTTTCCCCAGAAGTCCTA
GCTGAACAAGAGCAGTCGGGGAATGGAGGAAACATCAAGTATACTGAGAAATCTGATGTG
TACAGTTTTGGGATGATATGTTTTGAGGTTTTAACAGGGAAAGTTCCATTTGAAGATAGT
CATCTACAAGGAGATAAAATGAGTAGAAATATAAGGGCAGGAGAGAGACCATTATTCCCA
TTTCACTCACCAAAATATGTGACTAGCTTGACAAAGAGGTGTTGGCATACTGATCCATAT
CAACGACCAAGTTTTTCATCCATCTGCAGGGTTCTACGCTATGTGAAGAGATTCTTGGTG
ATGAATCCTGAACACAGCCAACAAGACTCACCATTGCCACCAGTAGACTATGGAGAGATT
GAAACTGTCATCTTAAGGAGCTTCCCCTTCTTAGGAAATTCTGAATCTGATCCCCTGCCT
GTCACACAAATACCTTTCCACATGTTTGCATACAGGGTGACCGAGAAAGAAAAGTCAAGC
ACAATTCACAGAGACGTAAATTCTGAATCAGGAAGTGATGGAACTTCAGCATGTGGGGAT
GATCCTGTAACGGCAGATGATGCACTTCCATCACCAACCGAAAAGAAGAATATTGCATCT
CCCGAGATTTTGACCAAGAGACTTTCAATTAGGAAACCTGCTGATATCAAAGTCGGCAAG
CAACCAGGAACACCAAGGGGAAGGACGGTAAGACCTCCAAACATACGTACTATAAGGCAA
AATTCTGAAAGTCAGTTAATGATGATGAACAGCCCAAGAACACGGAGATCATCTGGCCAT
GCATCAGATTCGGAGCTTCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000212
PEP Infomation

pacid=37441712 transcript=PGSC0003DMT400000279 locus=PGSC0003DMG400000093 ID=PGSC0003DMT400000279.v4.03 annot-version=v4.03
Sequence

MPALEEFRQIGEVIGSLKALMVFQDDIQINQKQCCLLVDMLKCAYKTIAETMKQNLRFEE
KNIKWKILENPLRELLRVFKEAEQYIKQSLENKDFWAKAIVLYKNTDCVEFHIHNLLSCV
PIVIEAIEIAGEISGSDHDEIQKKRFIYSMKYQKECKDPRIFQWKFGEQYMVSQKFCERV
CSVWNEDKWILQNKIREKKNLGACTLTKHEKRLADLLLKNLNEMEMESDHKLSPSSLLVN
SKDYQVRRRLGSGSKYKEIQWLGETFCLRHLFGDIKPLIPDISQELHLSHPNIMHISCGF
TDEEKRECFLIMELMSKDLSSCIKEICGPRKRVPFSLPVAIDLLLQIARGMEYLHSKKIY
HGELSPSNVLVKARNVSTEGYLHAKVCGFGSSCSINLPQKANVNQNNGTLPFIWFSPEVL
AEQEQSGNGGNIKYTEKSDVYSFGMICFEVLTGKVPFEDSHLQGDKMSRNIRAGERPLFP
FHSPKYVTSLTKRCWHTDPYQRPSFSSICRVLRYVKRFLVMNPEHSQQDSPLPPVDYGEI
ETVILRSFPFLGNSESDPLPVTQIPFHMFAYRVTEKEKSSTIHRDVNSESGSDGTSACGD
DPVTADDALPSPTEKKNIASPEILTKRLSIRKPADIKVGKQPGTPRGRTVRPPNIRTIRQ
NSESQLMMMNSPRTRRSSGHASDSELP*

Transcript Sequence

Transcript ID

PGSC0003DMT400000279
Transcript Infomation

pacid=37441712 locus=PGSC0003DMG400000093 ID=PGSC0003DMT400000279.v4.03 annot-version=v4.03
Sequence

ATGCCGGCGTTAGAGGAATTCAGGCAGATAGGAGAGGTAATTGGGAGTCTTAAAGCTCTA
ATGGTATTCCAAGATGACATACAAATAAATCAAAAACAATGTTGTTTGTTAGTGGATATG
CTCAAATGTGCCTACAAGACAATTGCAGAAACAATGAAACAGAACTTGAGATTTGAAGAG
AAGAATATTAAATGGAAAATTCTTGAGAACCCCTTAAGAGAGCTTCTCAGGGTGTTCAAA
GAAGCAGAACAGTACATCAAGCAATCCCTGGAAAATAAGGATTTTTGGGCAAAAGCCATA
GTTCTATATAAGAATACAGATTGTGTTGAATTTCACATCCACAATTTGCTCTCTTGTGTG
CCAATTGTCATCGAGGCCATAGAAATAGCAGGAGAGATTTCAGGTAGTGACCATGACGAG
ATACAGAAGAAGAGATTCATTTACTCGATGAAGTATCAGAAAGAGTGTAAGGACCCACGA
ATCTTCCAATGGAAATTCGGAGAACAGTACATGGTTTCTCAGAAGTTCTGCGAAAGGGTA
TGCTCAGTTTGGAATGAAGACAAGTGGATTTTGCAAAATAAAATTCGAGAGAAGAAGAAT
TTAGGTGCATGTACTTTGACAAAGCATGAGAAACGACTTGCTGATCTCCTCTTGAAAAAC
TTAAACGAGATGGAGATGGAGAGTGATCATAAGCTTTCACCTAGCTCACTTCTTGTAAAT
TCTAAGGATTACCAGGTAAGAAGACGATTAGGTAGTGGAAGTAAGTACAAGGAGATCCAA
TGGTTGGGGGAGACCTTTTGTTTAAGGCATTTGTTTGGGGATATTAAGCCCCTCATTCCA
GATATTTCGCAAGAACTGCATCTCTCTCATCCAAATATAATGCACATCTCCTGTGGTTTT
ACTGACGAAGAAAAGAGAGAATGTTTCTTAATCATGGAACTTATGAGCAAAGATTTATCT
AGTTGCATCAAAGAGATCTGTGGACCAAGAAAGCGTGTACCGTTTTCTCTTCCCGTTGCA
ATCGATTTACTCCTTCAGATTGCAAGAGGCATGGAATACCTACACTCAAAGAAAATCTAT
CATGGTGAATTGAGTCCTTCCAACGTCCTTGTCAAGGCGAGGAACGTATCTACAGAAGGG
TATTTACATGCAAAGGTTTGTGGATTTGGCTCATCGTGTTCTATCAACCTTCCTCAGAAA
GCTAATGTGAATCAAAATAATGGGACACTCCCATTCATTTGGTTTTCCCCAGAAGTCCTA
GCTGAACAAGAGCAGTCGGGGAATGGAGGAAACATCAAGTATACTGAGAAATCTGATGTG
TACAGTTTTGGGATGATATGTTTTGAGGTTTTAACAGGGAAAGTTCCATTTGAAGATAGT
CATCTACAAGGAGATAAAATGAGTAGAAATATAAGGGCAGGAGAGAGACCATTATTCCCA
TTTCACTCACCAAAATATGTGACTAGCTTGACAAAGAGGTGTTGGCATACTGATCCATAT
CAACGACCAAGTTTTTCATCCATCTGCAGGGTTCTACGCTATGTGAAGAGATTCTTGGTG
ATGAATCCTGAACACAGCCAACAAGACTCACCATTGCCACCAGTAGACTATGGAGAGATT
GAAACTGTCATCTTAAGGAGCTTCCCCTTCTTAGGAAATTCTGAATCTGATCCCCTGCCT
GTCACACAAATACCTTTCCACATGTTTGCATACAGGGTGACCGAGAAAGAAAAGTCAAGC
ACAATTCACAGAGACGTAAATTCTGAATCAGGAAGTGATGGAACTTCAGCATGTGGGGAT
GATCCTGTAACGGCAGATGATGCACTTCCATCACCAACCGAAAAGAAGAATATTGCATCT
CCCGAGATTTTGACCAAGAGACTTTCAATTAGGAAACCTGCTGATATCAAAGTCGGCAAG
CAACCAGGAACACCAAGGGGAAGGACGGTAAGACCTCCAAACATACGTACTATAAGGCAA
AATTCTGAAAGTCAGTTAATGATGATGAACAGCCCAAGAACACGGAGATCATCTGGCCAT
GCATCAGATTCGGAGCTTCCTTAA