Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000249
CDS Infomation

pacid=37439676 polypeptide=PGSC0003DMP400000188 locus=PGSC0003DMG400000080 ID=PGSC0003DMT400000249.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGGGAACTCAAATTCTGGAGATCAACTTGATCTCTGCTCAATCCCTCAAAACC
CCAGTCGCTAACTTGCGCCGTATGCAAACTTATGCCATACTCTGGGTTGATTCATCAACC
AAGCTTCGTACCAAGATCGATCATCTCGGTGGCGAAAACCCTACATGGAACGACAAATTC
CTCTTCCGTGTTTCGCCGGAATTCATTTCAGGTGAAACCTCCGGTGTCTCTGTTGAAATC
TACGCCGTCGGTTACATCAAGGATTTTCTCATTGGTACTGTGCGTTTACTCATAAGTAGT
TGTCTTAAAGGAATTGCGAATCATGGAATTACTACTGCAACTCCGGCTTTCACTGCTGTA
CAAGTTAGGCGGCCTTCTGGAAGATTCCATGGAGTTTTGAATATTGCTGCTGCGGTGTAT
TGTAGTTCGGATTTTTCGTTGTTGAATGGATTATCTGCCATCTGCTTCGGGGATTTGATG
GAAGAAAAAGAGAATGGTAGTCGATGGCGGCGGCGACGTCTTAGCCGTGGAGGATCGAAG
CGGAGCGAGCCACCATCATCAGGCGGCGAATCTTACGATTTCTCCGACGGCACTGATTCG
ACAACTTCGTCGTCGTCTTCATCGGCGGTGTCAATGGCGTTGAAAAATTGCAACTGTGTA
CCAACAGTTACAGAGATGGCGGGAAAGAAAGATTTGAAATCAGACGGTGGAGGTTTGCTG
TGTGGATTGATGCTGCAGAAGAAGATCCCATTCTGTCCGTTTGATCAAAATTCAGCGTTC
TGGACTGAATCCTTTGAGAAGGAACCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400000188
PEP Infomation

pacid=37439676 transcript=PGSC0003DMT400000249 locus=PGSC0003DMG400000080 ID=PGSC0003DMT400000249.v4.03 annot-version=v4.03
Sequence

MEEGTQILEINLISAQSLKTPVANLRRMQTYAILWVDSSTKLRTKIDHLGGENPTWNDKF
LFRVSPEFISGETSGVSVEIYAVGYIKDFLIGTVRLLISSCLKGIANHGITTATPAFTAV
QVRRPSGRFHGVLNIAAAVYCSSDFSLLNGLSAICFGDLMEEKENGSRWRRRRLSRGGSK
RSEPPSSGGESYDFSDGTDSTTSSSSSSAVSMALKNCNCVPTVTEMAGKKDLKSDGGGLL
CGLMLQKKIPFCPFDQNSAFWTESFEKEP*

Transcript Sequence

Transcript ID

PGSC0003DMT400000249
Transcript Infomation

pacid=37439676 locus=PGSC0003DMG400000080 ID=PGSC0003DMT400000249.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGGGAACTCAAATTCTGGAGATCAACTTGATCTCTGCTCAATCCCTCAAAACC
CCAGTCGCTAACTTGCGCCGTATGCAAACTTATGCCATACTCTGGGTTGATTCATCAACC
AAGCTTCGTACCAAGATCGATCATCTCGGTGGCGAAAACCCTACATGGAACGACAAATTC
CTCTTCCGTGTTTCGCCGGAATTCATTTCAGGTGAAACCTCCGGTGTCTCTGTTGAAATC
TACGCCGTCGGTTACATCAAGGATTTTCTCATTGGTACTGTGCGTTTACTCATAAGTAGT
TGTCTTAAAGGAATTGCGAATCATGGAATTACTACTGCAACTCCGGCTTTCACTGCTGTA
CAAGTTAGGCGGCCTTCTGGAAGATTCCATGGAGTTTTGAATATTGCTGCTGCGGTGTAT
TGTAGTTCGGATTTTTCGTTGTTGAATGGATTATCTGCCATCTGCTTCGGGGATTTGATG
GAAGAAAAAGAGAATGGTAGTCGATGGCGGCGGCGACGTCTTAGCCGTGGAGGATCGAAG
CGGAGCGAGCCACCATCATCAGGCGGCGAATCTTACGATTTCTCCGACGGCACTGATTCG
ACAACTTCGTCGTCGTCTTCATCGGCGGTGTCAATGGCGTTGAAAAATTGCAACTGTGTA
CCAACAGTTACAGAGATGGCGGGAAAGAAAGATTTGAAATCAGACGGTGGAGGTTTGCTG
TGTGGATTGATGCTGCAGAAGAAGATCCCATTCTGTCCGTTTGATCAAAATTCAGCGTTC
TGGACTGAATCCTTTGAGAAGGAACCATAA