Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000247
CDS Infomation

pacid=37437110 polypeptide=PGSC0003DMP400000187 locus=PGSC0003DMG400000079 ID=PGSC0003DMT400000247.v4.03 annot-version=v4.03
Sequence

ATGTATCCCATGAATCCTTACCAACGGAACCAAGTACCTTACAATCCTCATTATTATCCC
CACTTCGAATCGAATCCTCATCATCATATGAACATTGATCCAACTAGATCTACATTACCT
TATGAATCTTGGCCTTGTGGTGGTAGCAGCTATGGGCATCCTTATCCACCTCAGTGTCAC
AGTTGCTGTATCCATAACAATTCTCCGAGCCAGTGTGCATTTAGCCCTCCGTATCCTTAC
CTTCCACCACCTACATATCCTGTGATGTATCCTACTCATTATGTTCCTCCTCCACATTTT
AGTATGGAGCAGCCCCGATACGAGTATGAAAAGAATATGGGCAGAGATCATCACTGTTGT
GGTTGTTCAAATCATCAATGTGGTAGTAAGAAAGGAGGAGGGAGCAGTGTCAAAATAGAA
GAACATGGCCAGGATAAGAAAAACGAAAGTAACGAGTCATTGGTTCCTTTTGGGTTCAAG
AATTGTCCTTATCCAGTTGTGAGCTTACCACCTGATGACATGAAGAATAGGGAGCACATG
AAGCCTAATGGATCCAATTGTAAAGAGGAGGAGGAGAATCCGCAAGTTGTGAAGCCGTTT
GGCGATTTCAGGCCCTTCCAGCAACCAAATGTCTGGAATTTATGGCCTTCTCATTATGGG
AACAGCTCAGAATCACCAAAGCAAACGGGAGATTTACCCGGAAAACAACAAGATGATGAT
TCGATCAGGAAGCAGTTTCCATTTCCAATAATCTGGATGCCTTATAAGCCCGAGGAAGAC
GGAGAGAGAGTTGGTAAGGAAACTGAGTCTGGCCTCATTGCTGAGAAGGAGCCAACCTCC
CCCTCAAAATTAACCAAACCAATGTTACATGATTCTGAAGACAAGAGAAGCAGTTCTAAA
GAAAATGAAGTGATTAGCGGAAGTGAAATCCGTGGAAAGGGACTGAATAAAGGGACTGTT
GTGAAAATCATTCCTGTAAAGCAAGTGGAGCAGAATGAGATCTTTGATGGAAAAAAAGAG
GAGGCTTCCGAGAGGCATGAAAGTGATGCTAAACAGAAGAAAATTGCTCAAGAAGGTGGT
AAGAAACAGTCCCCTTCTCCTACAAAGTCATCGAAGTTGCCTCCTGTTTGTTTAAGGGTT
GATCCCCTTCCTAGGAAGAAAAGCAGTAATGGCAATTCTAGGTCTCCTAGTCCTCCTTGT
GGGAAAGGGAAATTAGTAGAATCGCGCAGTGAGAGCTCCAAACCTCCCATCCAATCAAAT
GAGAAGGAGAATGTTCAACTAGACAAATCATCAACAACAAGCATGCCAAAAAAAAGCACA
GAAGTGGAGCCAAGTAAAGGCAAGACAAAAGTTGTTGAGGTTGCCCAAGGGACATCTAAA
GAAGATAAACTTCAGGATCAATGTACTGTTTTCTCTGATCTGAAACGCCAGGCAAGGAGC
CAAACTGGTGAAGGCGATACTAGTAAAGCGGCAAATAAGCCAAAAGATGAACCTGATGCA
GTAGCTGCAAAAGCTCAGTCCAGCAATGAAGGACATCACAGAGGTGAGGCCAGAGAAGCA
GCCAATGTAGATGTGGGTGCAGGCAATGAGATGAAACGAGTAAAGAGGAGTCAACTGTCC
GATGATAAGGCAGCTACCATGATTCAGTCGGTATACCGAGGTTTCAACGTGCGGAGATGG
GAGCCTCTGAAGAAATTAAAGCAGATAGCCAAAATAGAGGAGCAGATGGCTGAGATCAAA
AAACGTATTCAGGATTTGGAGAGCTCAGCTGACAATGGAGTCGACAACAAACAGAGAACT
ATTATCACAGAAATCATAATGAGTCTTCTGCTGAAACTAGACGCTATTCAGGGGTTGCAT
CCAGCTGTTAGGGAATATAGAAAATCCGTAGCGAAGGAGATTGTTAGCCTGCAGGAGAAG
CTGGATCTTCTAAACTGTAAAAAGCAACCAGCAGAAAGTGAAGAGACTTTTACTGCCAAA
TCTAGTGAGGATACATGCACGGCGGTGGAAGACAACCCTTCCTTGCAGGGCCAAGAGGTG
CAAAAGTTGGAAAGGGATGATGATTTTACTAAGGGGGATGAAGGAATAAAGTTTGATGCA
GAAGGACTTTGTGAAGAGCAGCCTCTTTGTGCAACAGAGATGCTACCCGACTCCCATGAT
GTAGGCAATGCAGTACTAGAGGGAAAAGAAGAAAACAAGGACGTTGAGGAGGTAATGGAA
GGCGTTTCGGGCAGCAGTGCAGTGAAGACAGGAGATGGAGCATCAGTAAAACCTTTTGAA
TCTGAAGAAAAAACAGATAAGTTGCTTGATGAGAACACAGCAGTAGTTGAGAAATTAGAA
GAGCGTGGAGATGGTGTGGATGAGTTGGAAGAACTTCCTCGAGGAGTCCTTGATGAAGAG
ACCAGCATTAAAGGTTCTGCTGAAATCAGAAAAGACACAGTAGACCTTACTGCACTTACC
CTTGACGAAAAAGTCTCTGATACAGCGAGTCTAGAGCACCACCACTTGGAAGCATTGGGT
GAAACACCATTTATTTTGGGGACGGAGAATATGCACAGCAGCAATGGAGTAGAGGAAAAT
GCAGAAATTCTGGAAAGAGATGCAGCAGTACCAATTGACATTCCCAAACGAGAGAAAGAA
GATGCAAAACCATTAAGTGAAGATGCAAACATATCCGATGTGGATGACAAGGTTGGTATG
GAGAAGAATGAAAAAGAGCTTGATCAAGGCGGTAGTGCATCAGATGGTTTTTCAATACCA
TCACAGGAAGACGCAATCACCACAGAGCAGCCTACAGATACTACCAACGCAGAGGAATCA
GAAACAGTTGAGGTTCTGCAGGAGAAAATGCAAAATGCAGTTGACAAAGATATTGAAATC
CTTGATTCAGGAAAACCAGTAGAAAAATCGGTGGAACCTCAACTATCCACTGGTACCAAT
GACGAAGCTCGAGAGTACCATATTCAAGATAAGCAGAAAATTGGGGAGGAAAATAAGGAG
GTGCAAGGTGAGGAATTGCCAGTTCGTGATGATGCTGTCGTCTCTGAACCTAATAATGAA
GGAAAAGAGCGTAATGTGGTGGTTGAGCAGCGGCTTGTGGAGGAGAGCTTTGAGATGCAA
GGGAACGAACCAGTGGCTGCTGAACCAGAAACTGCCGATAATGCTGCACATGTGATCGAG
GAACCAGTGGATGGAACTAAAGCTACGGCTGCTCCAGCATCAGAAGCTGTAACTACCGAG
ACAGACCTGTCAAGGGAGAAAGAGCTTGGTGTAGCAGATGACCACAACACACATCGATCT
TGTGATGCCGTGGAAGGTAATTCTGTTGATACTTCCCATTCTTTTGGTTCTTCTACGCCT
ATTGAAGTACAAGTTATGGATGCAAACAAGCTTAAAGAATGGATGAAAGTGGACATGTCC
CCATCGTCACCTACTGCCAGCCAAGAATCCTGTGATAGTGATGCGCTGTCTGAGAGCGAT
AAAAAACTTATTGAGGAGAATGAAAAATTAAGGGAGATGATGGAGAAGTTAATTAAATCA
GGGAATGAACAACTGACTGCCATATCCAGTCTTTATGGAAGAGTTAAGGACCTGGAGAAG
AGATTGTCTAAGAAGAAGAAGCTAAAATTGAAACGAAATAGGGTACCAGCAGCTGGATCA
GCCTGTGTAAAGCCATTGAATGACTCACTTAGAAACAGGTCTGTGGGGTTGGCAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000187
PEP Infomation

pacid=37437110 transcript=PGSC0003DMT400000247 locus=PGSC0003DMG400000079 ID=PGSC0003DMT400000247.v4.03 annot-version=v4.03
Sequence

MYPMNPYQRNQVPYNPHYYPHFESNPHHHMNIDPTRSTLPYESWPCGGSSYGHPYPPQCH
SCCIHNNSPSQCAFSPPYPYLPPPTYPVMYPTHYVPPPHFSMEQPRYEYEKNMGRDHHCC
GCSNHQCGSKKGGGSSVKIEEHGQDKKNESNESLVPFGFKNCPYPVVSLPPDDMKNREHM
KPNGSNCKEEEENPQVVKPFGDFRPFQQPNVWNLWPSHYGNSSESPKQTGDLPGKQQDDD
SIRKQFPFPIIWMPYKPEEDGERVGKETESGLIAEKEPTSPSKLTKPMLHDSEDKRSSSK
ENEVISGSEIRGKGLNKGTVVKIIPVKQVEQNEIFDGKKEEASERHESDAKQKKIAQEGG
KKQSPSPTKSSKLPPVCLRVDPLPRKKSSNGNSRSPSPPCGKGKLVESRSESSKPPIQSN
EKENVQLDKSSTTSMPKKSTEVEPSKGKTKVVEVAQGTSKEDKLQDQCTVFSDLKRQARS
QTGEGDTSKAANKPKDEPDAVAAKAQSSNEGHHRGEAREAANVDVGAGNEMKRVKRSQLS
DDKAATMIQSVYRGFNVRRWEPLKKLKQIAKIEEQMAEIKKRIQDLESSADNGVDNKQRT
IITEIIMSLLLKLDAIQGLHPAVREYRKSVAKEIVSLQEKLDLLNCKKQPAESEETFTAK
SSEDTCTAVEDNPSLQGQEVQKLERDDDFTKGDEGIKFDAEGLCEEQPLCATEMLPDSHD
VGNAVLEGKEENKDVEEVMEGVSGSSAVKTGDGASVKPFESEEKTDKLLDENTAVVEKLE
ERGDGVDELEELPRGVLDEETSIKGSAEIRKDTVDLTALTLDEKVSDTASLEHHHLEALG
ETPFILGTENMHSSNGVEENAEILERDAAVPIDIPKREKEDAKPLSEDANISDVDDKVGM
EKNEKELDQGGSASDGFSIPSQEDAITTEQPTDTTNAEESETVEVLQEKMQNAVDKDIEI
LDSGKPVEKSVEPQLSTGTNDEAREYHIQDKQKIGEENKEVQGEELPVRDDAVVSEPNNE
GKERNVVVEQRLVEESFEMQGNEPVAAEPETADNAAHVIEEPVDGTKATAAPASEAVTTE
TDLSREKELGVADDHNTHRSCDAVEGNSVDTSHSFGSSTPIEVQVMDANKLKEWMKVDMS
PSSPTASQESCDSDALSESDKKLIEENEKLREMMEKLIKSGNEQLTAISSLYGRVKDLEK
RLSKKKKLKLKRNRVPAAGSACVKPLNDSLRNRSVGLAM*

Transcript Sequence

Transcript ID

PGSC0003DMT400000247
Transcript Infomation

pacid=37437110 locus=PGSC0003DMG400000079 ID=PGSC0003DMT400000247.v4.03 annot-version=v4.03
Sequence

ATGTATCCCATGAATCCTTACCAACGGAACCAAGTACCTTACAATCCTCATTATTATCCC
CACTTCGAATCGAATCCTCATCATCATATGAACATTGATCCAACTAGATCTACATTACCT
TATGAATCTTGGCCTTGTGGTGGTAGCAGCTATGGGCATCCTTATCCACCTCAGTGTCAC
AGTTGCTGTATCCATAACAATTCTCCGAGCCAGTGTGCATTTAGCCCTCCGTATCCTTAC
CTTCCACCACCTACATATCCTGTGATGTATCCTACTCATTATGTTCCTCCTCCACATTTT
AGTATGGAGCAGCCCCGATACGAGTATGAAAAGAATATGGGCAGAGATCATCACTGTTGT
GGTTGTTCAAATCATCAATGTGGTAGTAAGAAAGGAGGAGGGAGCAGTGTCAAAATAGAA
GAACATGGCCAGGATAAGAAAAACGAAAGTAACGAGTCATTGGTTCCTTTTGGGTTCAAG
AATTGTCCTTATCCAGTTGTGAGCTTACCACCTGATGACATGAAGAATAGGGAGCACATG
AAGCCTAATGGATCCAATTGTAAAGAGGAGGAGGAGAATCCGCAAGTTGTGAAGCCGTTT
GGCGATTTCAGGCCCTTCCAGCAACCAAATGTCTGGAATTTATGGCCTTCTCATTATGGG
AACAGCTCAGAATCACCAAAGCAAACGGGAGATTTACCCGGAAAACAACAAGATGATGAT
TCGATCAGGAAGCAGTTTCCATTTCCAATAATCTGGATGCCTTATAAGCCCGAGGAAGAC
GGAGAGAGAGTTGGTAAGGAAACTGAGTCTGGCCTCATTGCTGAGAAGGAGCCAACCTCC
CCCTCAAAATTAACCAAACCAATGTTACATGATTCTGAAGACAAGAGAAGCAGTTCTAAA
GAAAATGAAGTGATTAGCGGAAGTGAAATCCGTGGAAAGGGACTGAATAAAGGGACTGTT
GTGAAAATCATTCCTGTAAAGCAAGTGGAGCAGAATGAGATCTTTGATGGAAAAAAAGAG
GAGGCTTCCGAGAGGCATGAAAGTGATGCTAAACAGAAGAAAATTGCTCAAGAAGGTGGT
AAGAAACAGTCCCCTTCTCCTACAAAGTCATCGAAGTTGCCTCCTGTTTGTTTAAGGGTT
GATCCCCTTCCTAGGAAGAAAAGCAGTAATGGCAATTCTAGGTCTCCTAGTCCTCCTTGT
GGGAAAGGGAAATTAGTAGAATCGCGCAGTGAGAGCTCCAAACCTCCCATCCAATCAAAT
GAGAAGGAGAATGTTCAACTAGACAAATCATCAACAACAAGCATGCCAAAAAAAAGCACA
GAAGTGGAGCCAAGTAAAGGCAAGACAAAAGTTGTTGAGGTTGCCCAAGGGACATCTAAA
GAAGATAAACTTCAGGATCAATGTACTGTTTTCTCTGATCTGAAACGCCAGGCAAGGAGC
CAAACTGGTGAAGGCGATACTAGTAAAGCGGCAAATAAGCCAAAAGATGAACCTGATGCA
GTAGCTGCAAAAGCTCAGTCCAGCAATGAAGGACATCACAGAGGTGAGGCCAGAGAAGCA
GCCAATGTAGATGTGGGTGCAGGCAATGAGATGAAACGAGTAAAGAGGAGTCAACTGTCC
GATGATAAGGCAGCTACCATGATTCAGTCGGTATACCGAGGTTTCAACGTGCGGAGATGG
GAGCCTCTGAAGAAATTAAAGCAGATAGCCAAAATAGAGGAGCAGATGGCTGAGATCAAA
AAACGTATTCAGGATTTGGAGAGCTCAGCTGACAATGGAGTCGACAACAAACAGAGAACT
ATTATCACAGAAATCATAATGAGTCTTCTGCTGAAACTAGACGCTATTCAGGGGTTGCAT
CCAGCTGTTAGGGAATATAGAAAATCCGTAGCGAAGGAGATTGTTAGCCTGCAGGAGAAG
CTGGATCTTCTAAACTGTAAAAAGCAACCAGCAGAAAGTGAAGAGACTTTTACTGCCAAA
TCTAGTGAGGATACATGCACGGCGGTGGAAGACAACCCTTCCTTGCAGGGCCAAGAGGTG
CAAAAGTTGGAAAGGGATGATGATTTTACTAAGGGGGATGAAGGAATAAAGTTTGATGCA
GAAGGACTTTGTGAAGAGCAGCCTCTTTGTGCAACAGAGATGCTACCCGACTCCCATGAT
GTAGGCAATGCAGTACTAGAGGGAAAAGAAGAAAACAAGGACGTTGAGGAGGTAATGGAA
GGCGTTTCGGGCAGCAGTGCAGTGAAGACAGGAGATGGAGCATCAGTAAAACCTTTTGAA
TCTGAAGAAAAAACAGATAAGTTGCTTGATGAGAACACAGCAGTAGTTGAGAAATTAGAA
GAGCGTGGAGATGGTGTGGATGAGTTGGAAGAACTTCCTCGAGGAGTCCTTGATGAAGAG
ACCAGCATTAAAGGTTCTGCTGAAATCAGAAAAGACACAGTAGACCTTACTGCACTTACC
CTTGACGAAAAAGTCTCTGATACAGCGAGTCTAGAGCACCACCACTTGGAAGCATTGGGT
GAAACACCATTTATTTTGGGGACGGAGAATATGCACAGCAGCAATGGAGTAGAGGAAAAT
GCAGAAATTCTGGAAAGAGATGCAGCAGTACCAATTGACATTCCCAAACGAGAGAAAGAA
GATGCAAAACCATTAAGTGAAGATGCAAACATATCCGATGTGGATGACAAGGTTGGTATG
GAGAAGAATGAAAAAGAGCTTGATCAAGGCGGTAGTGCATCAGATGGTTTTTCAATACCA
TCACAGGAAGACGCAATCACCACAGAGCAGCCTACAGATACTACCAACGCAGAGGAATCA
GAAACAGTTGAGGTTCTGCAGGAGAAAATGCAAAATGCAGTTGACAAAGATATTGAAATC
CTTGATTCAGGAAAACCAGTAGAAAAATCGGTGGAACCTCAACTATCCACTGGTACCAAT
GACGAAGCTCGAGAGTACCATATTCAAGATAAGCAGAAAATTGGGGAGGAAAATAAGGAG
GTGCAAGGTGAGGAATTGCCAGTTCGTGATGATGCTGTCGTCTCTGAACCTAATAATGAA
GGAAAAGAGCGTAATGTGGTGGTTGAGCAGCGGCTTGTGGAGGAGAGCTTTGAGATGCAA
GGGAACGAACCAGTGGCTGCTGAACCAGAAACTGCCGATAATGCTGCACATGTGATCGAG
GAACCAGTGGATGGAACTAAAGCTACGGCTGCTCCAGCATCAGAAGCTGTAACTACCGAG
ACAGACCTGTCAAGGGAGAAAGAGCTTGGTGTAGCAGATGACCACAACACACATCGATCT
TGTGATGCCGTGGAAGGTAATTCTGTTGATACTTCCCATTCTTTTGGTTCTTCTACGCCT
ATTGAAGTACAAGTTATGGATGCAAACAAGCTTAAAGAATGGATGAAAGTGGACATGTCC
CCATCGTCACCTACTGCCAGCCAAGAATCCTGTGATAGTGATGCGCTGTCTGAGAGCGAT
AAAAAACTTATTGAGGAGAATGAAAAATTAAGGGAGATGATGGAGAAGTTAATTAAATCA
GGGAATGAACAACTGACTGCCATATCCAGTCTTTATGGAAGAGTTAAGGACCTGGAGAAG
AGATTGTCTAAGAAGAAGAAGCTAAAATTGAAACGAAATAGGGTACCAGCAGCTGGATCA
GCCTGTGTAAAGCCATTGAATGACTCACTTAGAAACAGGTCTGTGGGGTTGGCAATGTAA