Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000225
CDS Infomation

pacid=37440315 polypeptide=PGSC0003DMP400000165 locus=PGSC0003DMG400000068 ID=PGSC0003DMT400000225.v4.03 annot-version=v4.03
Sequence

ATGAGAGTAAATCTTAGAGCATCACTGAAGCTAACTTCACATTCTTTTTCACCCCATATT
CATTCAGCATGTACTATACGATCGTCATCTTCTTTTTCTACTGCACAAAAAGAGAAGACC
TTCTTCGAACCCGCTAACAAAGACCAAATGATTACACGGTTATGTAACGAAAACAAATTC
AACGAAGCCCTTCAAATTCTTTGCGAGCAAAGGCAATTGAAAGAAGCCATTCAATTGCTA
GAACGTCCTGAAACCCGTCCGTCAGCTACAGTCTTTTCGACCCTTTTGCGGATATGCATC
GATAACCGGGCTCTTGAAGAAGGAAAGAGAGTTCATAAAAGTATGAAATGTTCAGGTTTT
AGACCTGGGGTTGTCATTTCTAATCGGATTCTTGATTTTTACTGTAAATGTGATAAACCC
TTTGATGCACACAACTTGTTTGTTGAAATGCCTGAGAGGGATTTGTGTTCATGGAATATT
ATGGTTTCTGGGTTCGCTAAATTGGGTTTGATCGATGAAGCTAGGAAATTGTTCGATGAA
ATGCCTGAGAAAGATAATTTTTCTTGGACCGCCATGATCTCGGGTTATGTGAGGCAGAAT
AAGCCTGAATGTGCATTAGAATTGTATAGAGTGATGCAGAGGGATGAGAATGTTAAGTGT
AATAAGTTTACTATTTCGAGTGCTCTTGCTGCTTCTGCTTCTGTTCAGTCTTTACGTTTG
GGAAAGGAGATTCATGGTCATATTGTGAGAACTGGTTTGGATTCTGATGCGGTTGTTTGG
AGTGCTTTGAGTGATATGTATGGAAAATGTGGGAGCGTGGATGAAGCAAGGCATATTTTT
GATAGGACAAAAGATAAGGATGTTGTTTCGTGGACGGCTATGATTGATAGATACTTTGGA
GATGGGAGGTGGGAGGAAGGTTATTTGTTGTTTTCATGTTTGATGGAATCGGGAATTAGG
CCTAATGATTTTACCTTTGCTGGAGTTTTGAATGCATGTGCACACCAAACGACAGAACAT
TTTGGAAAACAAGTACATGGGTACATGACGCGTATTGGCTTTGATCCTCTTTCCTTTGCA
GCAAGTACCTTAGTTCATATGTATGCCAAGTGTGGGAGCGTAGATAGTGCATACAAGGTA
TTTAAGCGGCTCCCGAGGCCTGATGTAGTTTCTTGGACCTCACTGATTAATGGTTATGCT
CAAAACGGCCAACCTAGTGAAGCTCTTCAGTTATTCGACTTGTTGCTTAAATCTGGCACT
CAGCCTGATCATATTACATTTGTTGGGGTTCTTTCTGCTTGCACTCATGCAGGTTTAGTT
GATAAAGGGCTTGAATATTTCTACTCTATAAAGGACAAGCATTGTCTAACCCATACTTCT
GACCACTATGCTTGTGTGATTGATCTCCTGAGCCGATTTGGCAGATTTAAGGAGGCTGAA
GAGATTATTAGTCAGATGCCAATGAAACCTGACAAGTTTTTGTGGGCTTCCTTGCTTGGA
GGATGCAGAGTCCATGGAAATGTTGAACTAGCAAAGAGAGCAGCTGAAGCACTATTTGAA
ATTGAGCCCGAGAATGCAGCTACTTATGTCACCATTGCAAACGTATATGCCACTGCTGGT
AAATGGACTGAAGTGGCAAAAATCAGACAAGTCATGGAAGAGAAAGGTGTGGTGAAGAAG
CCTGGTATAAGTTGGATCAATTTACTGAGAAAAGACTACGTTTTCTTGGTCGGCGATAAA
TCACATCCTAGATCAAAGGAAATATACGAGTTTTTAGGGGAGCTTTGGAGGAGAATGAAA
GAAGAGGGATATGTCCCTGACATAGACAATGTGCTACATGATGTGGAAGAGGAACAGAAG
GAGGAAAATCTTTCCTATCACAGTGAAAAGCTCGCAGTTGCCTTTGGAATTATAGCAACT
CCGCCTGGAACACAGATAAAGGTTTTTAAGAATCTAAGGACATGTGTTGATTGTCACACT
GCGATTAAATATATCTCTAAAATAGAAGAGAGAAGAATTATTGTGCGAGATTCCAGTCGG
TTTCACTGTTTTGAAGGTGGGAGTTGTTCATGCAAGGACTATTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000165
PEP Infomation

pacid=37440315 transcript=PGSC0003DMT400000225 locus=PGSC0003DMG400000068 ID=PGSC0003DMT400000225.v4.03 annot-version=v4.03
Sequence

MRVNLRASLKLTSHSFSPHIHSACTIRSSSSFSTAQKEKTFFEPANKDQMITRLCNENKF
NEALQILCEQRQLKEAIQLLERPETRPSATVFSTLLRICIDNRALEEGKRVHKSMKCSGF
RPGVVISNRILDFYCKCDKPFDAHNLFVEMPERDLCSWNIMVSGFAKLGLIDEARKLFDE
MPEKDNFSWTAMISGYVRQNKPECALELYRVMQRDENVKCNKFTISSALAASASVQSLRL
GKEIHGHIVRTGLDSDAVVWSALSDMYGKCGSVDEARHIFDRTKDKDVVSWTAMIDRYFG
DGRWEEGYLLFSCLMESGIRPNDFTFAGVLNACAHQTTEHFGKQVHGYMTRIGFDPLSFA
ASTLVHMYAKCGSVDSAYKVFKRLPRPDVVSWTSLINGYAQNGQPSEALQLFDLLLKSGT
QPDHITFVGVLSACTHAGLVDKGLEYFYSIKDKHCLTHTSDHYACVIDLLSRFGRFKEAE
EIISQMPMKPDKFLWASLLGGCRVHGNVELAKRAAEALFEIEPENAATYVTIANVYATAG
KWTEVAKIRQVMEEKGVVKKPGISWINLLRKDYVFLVGDKSHPRSKEIYEFLGELWRRMK
EEGYVPDIDNVLHDVEEEQKEENLSYHSEKLAVAFGIIATPPGTQIKVFKNLRTCVDCHT
AIKYISKIEERRIIVRDSSRFHCFEGGSCSCKDYW*

Transcript Sequence

Transcript ID

PGSC0003DMT400000225
Transcript Infomation

pacid=37440315 locus=PGSC0003DMG400000068 ID=PGSC0003DMT400000225.v4.03 annot-version=v4.03
Sequence

ATGAGAGTAAATCTTAGAGCATCACTGAAGCTAACTTCACATTCTTTTTCACCCCATATT
CATTCAGCATGTACTATACGATCGTCATCTTCTTTTTCTACTGCACAAAAAGAGAAGACC
TTCTTCGAACCCGCTAACAAAGACCAAATGATTACACGGTTATGTAACGAAAACAAATTC
AACGAAGCCCTTCAAATTCTTTGCGAGCAAAGGCAATTGAAAGAAGCCATTCAATTGCTA
GAACGTCCTGAAACCCGTCCGTCAGCTACAGTCTTTTCGACCCTTTTGCGGATATGCATC
GATAACCGGGCTCTTGAAGAAGGAAAGAGAGTTCATAAAAGTATGAAATGTTCAGGTTTT
AGACCTGGGGTTGTCATTTCTAATCGGATTCTTGATTTTTACTGTAAATGTGATAAACCC
TTTGATGCACACAACTTGTTTGTTGAAATGCCTGAGAGGGATTTGTGTTCATGGAATATT
ATGGTTTCTGGGTTCGCTAAATTGGGTTTGATCGATGAAGCTAGGAAATTGTTCGATGAA
ATGCCTGAGAAAGATAATTTTTCTTGGACCGCCATGATCTCGGGTTATGTGAGGCAGAAT
AAGCCTGAATGTGCATTAGAATTGTATAGAGTGATGCAGAGGGATGAGAATGTTAAGTGT
AATAAGTTTACTATTTCGAGTGCTCTTGCTGCTTCTGCTTCTGTTCAGTCTTTACGTTTG
GGAAAGGAGATTCATGGTCATATTGTGAGAACTGGTTTGGATTCTGATGCGGTTGTTTGG
AGTGCTTTGAGTGATATGTATGGAAAATGTGGGAGCGTGGATGAAGCAAGGCATATTTTT
GATAGGACAAAAGATAAGGATGTTGTTTCGTGGACGGCTATGATTGATAGATACTTTGGA
GATGGGAGGTGGGAGGAAGGTTATTTGTTGTTTTCATGTTTGATGGAATCGGGAATTAGG
CCTAATGATTTTACCTTTGCTGGAGTTTTGAATGCATGTGCACACCAAACGACAGAACAT
TTTGGAAAACAAGTACATGGGTACATGACGCGTATTGGCTTTGATCCTCTTTCCTTTGCA
GCAAGTACCTTAGTTCATATGTATGCCAAGTGTGGGAGCGTAGATAGTGCATACAAGGTA
TTTAAGCGGCTCCCGAGGCCTGATGTAGTTTCTTGGACCTCACTGATTAATGGTTATGCT
CAAAACGGCCAACCTAGTGAAGCTCTTCAGTTATTCGACTTGTTGCTTAAATCTGGCACT
CAGCCTGATCATATTACATTTGTTGGGGTTCTTTCTGCTTGCACTCATGCAGGTTTAGTT
GATAAAGGGCTTGAATATTTCTACTCTATAAAGGACAAGCATTGTCTAACCCATACTTCT
GACCACTATGCTTGTGTGATTGATCTCCTGAGCCGATTTGGCAGATTTAAGGAGGCTGAA
GAGATTATTAGTCAGATGCCAATGAAACCTGACAAGTTTTTGTGGGCTTCCTTGCTTGGA
GGATGCAGAGTCCATGGAAATGTTGAACTAGCAAAGAGAGCAGCTGAAGCACTATTTGAA
ATTGAGCCCGAGAATGCAGCTACTTATGTCACCATTGCAAACGTATATGCCACTGCTGGT
AAATGGACTGAAGTGGCAAAAATCAGACAAGTCATGGAAGAGAAAGGTGTGGTGAAGAAG
CCTGGTATAAGTTGGATCAATTTACTGAGAAAAGACTACGTTTTCTTGGTCGGCGATAAA
TCACATCCTAGATCAAAGGAAATATACGAGTTTTTAGGGGAGCTTTGGAGGAGAATGAAA
GAAGAGGGATATGTCCCTGACATAGACAATGTGCTACATGATGTGGAAGAGGAACAGAAG
GAGGAAAATCTTTCCTATCACAGTGAAAAGCTCGCAGTTGCCTTTGGAATTATAGCAACT
CCGCCTGGAACACAGATAAAGGTTTTTAAGAATCTAAGGACATGTGTTGATTGTCACACT
GCGATTAAATATATCTCTAAAATAGAAGAGAGAAGAATTATTGTGCGAGATTCCAGTCGG
TTTCACTGTTTTGAAGGTGGGAGTTGTTCATGCAAGGACTATTGGTGA