Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000219
CDS Infomation

pacid=37437973 polypeptide=PGSC0003DMP400000160 locus=PGSC0003DMG400000065 ID=PGSC0003DMT400000219.v4.03 annot-version=v4.03
Sequence

ATGCGGGCACTTCACTCATCATTCATAAAACCCCTCATTCGTCTTCATAGCCCATTTTCG
ACTCCCATTATTTCACCATCTCCACTTCGAAAACAATTTCTCTACTTGCACTCCTCCGCT
ACTACTTCACTCCAAAAGCTAACCGCCATGGCCGACAACAAGACGGCAGCCGTCGACGGC
AACTCTACCTCTGACCACGTCTCCGACGCTTGGTACTCCGTTCCCGAGCTCCGATTACGC
GATCACCGATTCACCGTTCCTCTCGATTACTCTATCGATCGCTGTTCCTCTACTAAAATC
ACAGTCTTCGCTCGTGAAGTAGTTGCTGTTGGTAAGGAGGAACAATCTCTGCCATATCTA
CTATATTTGCAAGGTGGACCAGGCTTTGAATGCCCAAGACCAACTGAAGCTGGAGGATGG
ATAAGCAGAGCATGTGAGGAGTACCGTATTGTTTTAATGGATCAGAGAGGAACAGGTCTA
TCAACACCATTAACACCATCATCTATGTCACAAGTGAAGTCTGCTGAGGATTTGGCTAAC
TACTTGAGACATTTCCGAGCTGATAATATAGTACATGATGCTGAGTTCATCCGAAAACGC
CTTGTCCCTGATGCTGGACCTTGGACAATACTTGGACAGAGTTTCGGAGGCTTTTGTGCA
GTTACCTACTTGAGTTTTGCTCCTCAAGGACTCAAACAAGCTCTTATAACTGGTGGGCTC
CCTCCAATTGGTGAAGGATGCACAGCTGATTCTGTTTATAAGGCAGGATTTGAGCAGCTT
GTTTGTCAGAACGAAAAATATTACAAGAGGTTTCCACAGGATATTGAAATTGTTCGTGAT
GTTGTAAATTATTTGGCAGAGTCAGGAGGCGGGGTACCTCTTCCATCTGGTGGCATCTTA
ACACCTCGAGGACTACAACTTCTTGGTCTCTCAGGTCTAGGGTCAAGTACTGGTTTTGAA
CGACTGCATTACCTGTTTGAGAGAGTCTGGGATCCTTTAATAGTTCAAGGAGCAAAAAGG
AGAATCAGTGACTACTTCTTGAATGCTTATGAGAGATGGATCGGATTTGATGCAAACCCT
TTATATGCTCTTTTGCATGAAAGCATATATTGCCAGGGTGCCTCATCCCTGTGGTCTGCT
CAGAGAATTAGGGCTCTAAATGACAACAAATTTGATGCAATTGAGGCAGCAAAAGTTGGC
CGCCCTGTACTTTTTACTGGAGAGGTGAGACACAATGTGGTCGTTTTTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400000160
PEP Infomation

pacid=37437973 transcript=PGSC0003DMT400000219 locus=PGSC0003DMG400000065 ID=PGSC0003DMT400000219.v4.03 annot-version=v4.03
Sequence

MRALHSSFIKPLIRLHSPFSTPIISPSPLRKQFLYLHSSATTSLQKLTAMADNKTAAVDG
NSTSDHVSDAWYSVPELRLRDHRFTVPLDYSIDRCSSTKITVFAREVVAVGKEEQSLPYL
LYLQGGPGFECPRPTEAGGWISRACEEYRIVLMDQRGTGLSTPLTPSSMSQVKSAEDLAN
YLRHFRADNIVHDAEFIRKRLVPDAGPWTILGQSFGGFCAVTYLSFAPQGLKQALITGGL
PPIGEGCTADSVYKAGFEQLVCQNEKYYKRFPQDIEIVRDVVNYLAESGGGVPLPSGGIL
TPRGLQLLGLSGLGSSTGFERLHYLFERVWDPLIVQGAKRRISDYFLNAYERWIGFDANP
LYALLHESIYCQGASSLWSAQRIRALNDNKFDAIEAAKVGRPVLFTGEVRHNVVVFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400000219
Transcript Infomation

pacid=37437973 locus=PGSC0003DMG400000065 ID=PGSC0003DMT400000219.v4.03 annot-version=v4.03
Sequence

ATGCGGGCACTTCACTCATCATTCATAAAACCCCTCATTCGTCTTCATAGCCCATTTTCG
ACTCCCATTATTTCACCATCTCCACTTCGAAAACAATTTCTCTACTTGCACTCCTCCGCT
ACTACTTCACTCCAAAAGCTAACCGCCATGGCCGACAACAAGACGGCAGCCGTCGACGGC
AACTCTACCTCTGACCACGTCTCCGACGCTTGGTACTCCGTTCCCGAGCTCCGATTACGC
GATCACCGATTCACCGTTCCTCTCGATTACTCTATCGATCGCTGTTCCTCTACTAAAATC
ACAGTCTTCGCTCGTGAAGTAGTTGCTGTTGGTAAGGAGGAACAATCTCTGCCATATCTA
CTATATTTGCAAGGTGGACCAGGCTTTGAATGCCCAAGACCAACTGAAGCTGGAGGATGG
ATAAGCAGAGCATGTGAGGAGTACCGTATTGTTTTAATGGATCAGAGAGGAACAGGTCTA
TCAACACCATTAACACCATCATCTATGTCACAAGTGAAGTCTGCTGAGGATTTGGCTAAC
TACTTGAGACATTTCCGAGCTGATAATATAGTACATGATGCTGAGTTCATCCGAAAACGC
CTTGTCCCTGATGCTGGACCTTGGACAATACTTGGACAGAGTTTCGGAGGCTTTTGTGCA
GTTACCTACTTGAGTTTTGCTCCTCAAGGACTCAAACAAGCTCTTATAACTGGTGGGCTC
CCTCCAATTGGTGAAGGATGCACAGCTGATTCTGTTTATAAGGCAGGATTTGAGCAGCTT
GTTTGTCAGAACGAAAAATATTACAAGAGGTTTCCACAGGATATTGAAATTGTTCGTGAT
GTTGTAAATTATTTGGCAGAGTCAGGAGGCGGGGTACCTCTTCCATCTGGTGGCATCTTA
ACACCTCGAGGACTACAACTTCTTGGTCTCTCAGGTCTAGGGTCAAGTACTGGTTTTGAA
CGACTGCATTACCTGTTTGAGAGAGTCTGGGATCCTTTAATAGTTCAAGGAGCAAAAAGG
AGAATCAGTGACTACTTCTTGAATGCTTATGAGAGATGGATCGGATTTGATGCAAACCCT
TTATATGCTCTTTTGCATGAAAGCATATATTGCCAGGGTGCCTCATCCCTGTGGTCTGCT
CAGAGAATTAGGGCTCTAAATGACAACAAATTTGATGCAATTGAGGCAGCAAAAGTTGGC
CGCCCTGTACTTTTTACTGGAGAGGTGAGACACAATGTGGTCGTTTTTGGTTAA