Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000200
CDS Infomation

pacid=37438260 polypeptide=PGSC0003DMP400000148 locus=PGSC0003DMG400000059 ID=PGSC0003DMT400000200.v4.03 annot-version=v4.03
Sequence

ATGAGTAAGAGTGAAAATGTTCATGTAGTAATGCTACCATGGTCTGCATTTGGTCACCTT
ATTCCATTTTCCAATCTCTCCTTAGCCTTAGCTGAATTAGGAGGAATTCATGTTTCATTC
ATTTCTACTCCGAAAAACATCCAAAGACTCCCTAAAGTTTCTCCTAACTTAACACATCTT
GTAAAACTAGTGGAATTTCCATTGCCAAGTCTTGATGACAACACTCTTTTGCCTGAAGAC
GCCGAGGCTTCTGTTGATCTTCCTTTAGAAAAAATTCAGTACTTGAAAGTAGCTTATGAT
CTACTCCGAGAACCGATCAAAAAGTTCATTGCTGATCAAAAACCTGATTGGATTATTGTT
GACTTCTTTCAAAATTGGATAGTTGAGATTGCTGAAGCTTATAATATCCCTATCATCCAC
TTCAGTGTTTTCTCAGCTGCTTCAAGAGCTTTTTTGATTGCTGCTAGAGCTTCAGGACCA
ATGCCTGAAAGCCTCACATTACCTGTTTCTGAGAAGCTGCATTTTCCATCAACGTTGGCT
TATCGGAGTTATGAAGCAGCAGAGCTTTTCTCCTTGTCTTTCCAAGAAGACGCCTCAGGG
GAATCATACGCTCAACGTTCAGCCAAGGTATTGAGAGCATGTCGAGCTGTAGCTATACGT
AGCTGCAATGAATTCGAAGGTGATTACTTGGATGCGATGCATAAACTCATCTCTAAGCCT
ATAATCCCAATTGGATTACTATCACCACCATCATGTGTAGACCTCAACATCAATCGCGAT
CAATCGTGGCAGAGGATCTTAAAATGGCTCAATCAACAGAATTTCCAGTCAGTTTTATTC
GTAGGACTTGGGAGTGAGTGTAAACCAAGTAAAGATCAAGTATATGAAATAGCTCATGGG
ATTGAACTATCTAAGCTACCATTTTTATGGATATTACAAAAGCCTAAATGGAGTAGTACT
ACTTCAAATGATGTGGATCCTTTGCCTGAAGGATTCAGGGCTAGGAATGCAGAGAAAGGC
GTGGTGCACATTGGATGGGCGCGTCAAAAGGAAATTCTTGCACATTCTTCAATTGGAGGA
GCACTAGTTCAAGGGGGACTAGGTTCAATTGTTGAAACACTACAGCATGGACATGTACTT
GTTGTTTTGCCATTTGTGCATGATCAAGGGCTGAATGCAAGATTGATAGTAGAAAAAGGA
TTCGGAATTGAAGTGGAGAGAAATGAAGAAAACGGATCGTTTACTAGAAAGGATATAGCC
AAGGCATTGATGTACGCCATGGTTTCCGAGGAAGGTAAAGAGATGAGAGAAAGAGCAAGA
AAAGCTATTGATGTTTTTGGAGATATACAGCTTCAGACTTCTTACATTGTTAGCTTTGTT
GAGTATCTGAAAAATAAGGGAAATAAAACTATGTTTTGTTGCCCGCAAGGGCATGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000148
PEP Infomation

pacid=37438260 transcript=PGSC0003DMT400000200 locus=PGSC0003DMG400000059 ID=PGSC0003DMT400000200.v4.03 annot-version=v4.03
Sequence

MSKSENVHVVMLPWSAFGHLIPFSNLSLALAELGGIHVSFISTPKNIQRLPKVSPNLTHL
VKLVEFPLPSLDDNTLLPEDAEASVDLPLEKIQYLKVAYDLLREPIKKFIADQKPDWIIV
DFFQNWIVEIAEAYNIPIIHFSVFSAASRAFLIAARASGPMPESLTLPVSEKLHFPSTLA
YRSYEAAELFSLSFQEDASGESYAQRSAKVLRACRAVAIRSCNEFEGDYLDAMHKLISKP
IIPIGLLSPPSCVDLNINRDQSWQRILKWLNQQNFQSVLFVGLGSECKPSKDQVYEIAHG
IELSKLPFLWILQKPKWSSTTSNDVDPLPEGFRARNAEKGVVHIGWARQKEILAHSSIGG
ALVQGGLGSIVETLQHGHVLVVLPFVHDQGLNARLIVEKGFGIEVERNEENGSFTRKDIA
KALMYAMVSEEGKEMRERARKAIDVFGDIQLQTSYIVSFVEYLKNKGNKTMFCCPQGHG*

Transcript Sequence

Transcript ID

PGSC0003DMT400000200
Transcript Infomation

pacid=37438260 locus=PGSC0003DMG400000059 ID=PGSC0003DMT400000200.v4.03 annot-version=v4.03
Sequence

ATGAGTAAGAGTGAAAATGTTCATGTAGTAATGCTACCATGGTCTGCATTTGGTCACCTT
ATTCCATTTTCCAATCTCTCCTTAGCCTTAGCTGAATTAGGAGGAATTCATGTTTCATTC
ATTTCTACTCCGAAAAACATCCAAAGACTCCCTAAAGTTTCTCCTAACTTAACACATCTT
GTAAAACTAGTGGAATTTCCATTGCCAAGTCTTGATGACAACACTCTTTTGCCTGAAGAC
GCCGAGGCTTCTGTTGATCTTCCTTTAGAAAAAATTCAGTACTTGAAAGTAGCTTATGAT
CTACTCCGAGAACCGATCAAAAAGTTCATTGCTGATCAAAAACCTGATTGGATTATTGTT
GACTTCTTTCAAAATTGGATAGTTGAGATTGCTGAAGCTTATAATATCCCTATCATCCAC
TTCAGTGTTTTCTCAGCTGCTTCAAGAGCTTTTTTGATTGCTGCTAGAGCTTCAGGACCA
ATGCCTGAAAGCCTCACATTACCTGTTTCTGAGAAGCTGCATTTTCCATCAACGTTGGCT
TATCGGAGTTATGAAGCAGCAGAGCTTTTCTCCTTGTCTTTCCAAGAAGACGCCTCAGGG
GAATCATACGCTCAACGTTCAGCCAAGGTATTGAGAGCATGTCGAGCTGTAGCTATACGT
AGCTGCAATGAATTCGAAGGTGATTACTTGGATGCGATGCATAAACTCATCTCTAAGCCT
ATAATCCCAATTGGATTACTATCACCACCATCATGTGTAGACCTCAACATCAATCGCGAT
CAATCGTGGCAGAGGATCTTAAAATGGCTCAATCAACAGAATTTCCAGTCAGTTTTATTC
GTAGGACTTGGGAGTGAGTGTAAACCAAGTAAAGATCAAGTATATGAAATAGCTCATGGG
ATTGAACTATCTAAGCTACCATTTTTATGGATATTACAAAAGCCTAAATGGAGTAGTACT
ACTTCAAATGATGTGGATCCTTTGCCTGAAGGATTCAGGGCTAGGAATGCAGAGAAAGGC
GTGGTGCACATTGGATGGGCGCGTCAAAAGGAAATTCTTGCACATTCTTCAATTGGAGGA
GCACTAGTTCAAGGGGGACTAGGTTCAATTGTTGAAACACTACAGCATGGACATGTACTT
GTTGTTTTGCCATTTGTGCATGATCAAGGGCTGAATGCAAGATTGATAGTAGAAAAAGGA
TTCGGAATTGAAGTGGAGAGAAATGAAGAAAACGGATCGTTTACTAGAAAGGATATAGCC
AAGGCATTGATGTACGCCATGGTTTCCGAGGAAGGTAAAGAGATGAGAGAAAGAGCAAGA
AAAGCTATTGATGTTTTTGGAGATATACAGCTTCAGACTTCTTACATTGTTAGCTTTGTT
GAGTATCTGAAAAATAAGGGAAATAAAACTATGTTTTGTTGCCCGCAAGGGCATGGTTGA