Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000186
CDS Infomation

pacid=37439459 polypeptide=PGSC0003DMP400000138 locus=PGSC0003DMG401000056 ID=PGSC0003DMT400000186.v4.03 annot-version=v4.03
Sequence

ATGTCTGTGTACGATGCGGCGTTTGTGAACAGTGAGTTATCGAAGAACACTTCGATATTT
GGATTGAAATTGTGGGTGGTGATTGGGATCTTTGTTGGAGCTGTATTTGTTCTCATACTC
TTCCTTCTGTCACTCTGTATCACCGCTTCTCGCCGCCGCACTACCACCCAAAAAGGCAAA
CTCCACCGTCCTATCAATTCTGAGCTTACCCCAGTTGTCTCCAAGGAAATCCAAGAGATT
GTCCACCATGACACCGCCCCAGATCACCGCCCCATTGTCCTTCAGGCTGTGCCAGAAATA
CAGATCAACATGGGGAAGGTGGAGCACAGAGTGGTGTTTTCAGACAAGATGCCTGGGGCA
TCAAGCGGTGAGAGTAGGGCGACTAGTGGGGCTGAAACGGGGTCGTTAGGGAATAGTGGG
CAATTGCCAGAAGTATCACATTTAGGGTGGGGAAGGTGGTATACGCTGAGAGAGCTCGAG
GCTGCCACTAATTGCTTGTCTGATGAGAATGTGATAGGAGAAGGCGGGTATGGAATTGTG
TATCAAGGTGTATTGACTGATGGCACCAGAGTAGCTGTTAAAAATCTCTTGAATAACAGG
GGTCAAGCAGAGAAGGAGTTTAAAGTGGAGGTAGAAGCTATTGGGCGTGTAAGACACAAG
AATCTCGTGAGGCTGCTTGGCTACTGTGTTGAAGGAGCTTACAGGATGCTTGTCTATGAG
TATGTAGATAATGGAACTTTGGAGCAATGGATTCACGGAGATGTTGGGGATGTCAGTCCT
TTGACATGGGATAACAGAATGACTATAATAGTGGGAACAGCAAAAGCTTTAGCATATCTT
CACGAGGGTCTGGAACCTAAAGTTGTTCATCGAGATGTAAAATCCAGCAACGTACTCCTC
GATCGCCAGTGGCATCCAAAGCTGTCCGACTTTGGGCTTGCTAAACTCCTCAATGCAGAG
AGGAGTTATGTGACAACTCGTGTAATGGGAACATTTGGTTATGTTGCACCAGAATATGCT
TGTACCGGCATGCTTAATGAGAAGAGTGACATTTATAGCTTTGGAATACTTATCATGGAG
ATAATTACTGGGAGAACTCCTGTTGATTATGGTAGACCAAAAGGCGAGACTAATTTGGTG
GAGTGGTTAAAAATGATGGTTGGGAATCGAAAATCTGAGGAAGTGGTTGATCCTAAGTTG
CCTGAAATGCCTTCTTCAAAAGGACTCAAGCGTGCTCTTTTGGTTGCTCTTCGGTGTGTT
GATCCTGATGCTCAAAAGAGGCCTAAAATGGGACACATTATCCACATGCTAGAGGCGGAT
GACCTGCTGGTTCGTGATGAACGTCGTATTGGTAGAGAAAGAGAATCGTCTAATTCCCAC
CGTGACTACAAACAAGACAACCAAGCTGGTCCCAAGTTATCCAGAAAACAATATGGTGAT
GGAGCACCAGAAACTAGTGAAGGAGATAGTAGTAGAAACCATAATTTGCCATCTAGTTGG
AGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000138
PEP Infomation

pacid=37439459 transcript=PGSC0003DMT400000186 locus=PGSC0003DMG401000056 ID=PGSC0003DMT400000186.v4.03 annot-version=v4.03
Sequence

MSVYDAAFVNSELSKNTSIFGLKLWVVIGIFVGAVFVLILFLLSLCITASRRRTTTQKGK
LHRPINSELTPVVSKEIQEIVHHDTAPDHRPIVLQAVPEIQINMGKVEHRVVFSDKMPGA
SSGESRATSGAETGSLGNSGQLPEVSHLGWGRWYTLRELEAATNCLSDENVIGEGGYGIV
YQGVLTDGTRVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYE
YVDNGTLEQWIHGDVGDVSPLTWDNRMTIIVGTAKALAYLHEGLEPKVVHRDVKSSNVLL
DRQWHPKLSDFGLAKLLNAERSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIME
IITGRTPVDYGRPKGETNLVEWLKMMVGNRKSEEVVDPKLPEMPSSKGLKRALLVALRCV
DPDAQKRPKMGHIIHMLEADDLLVRDERRIGRERESSNSHRDYKQDNQAGPKLSRKQYGD
GAPETSEGDSSRNHNLPSSWR*

Transcript Sequence

Transcript ID

PGSC0003DMT400000186
Transcript Infomation

pacid=37439459 locus=PGSC0003DMG401000056 ID=PGSC0003DMT400000186.v4.03 annot-version=v4.03
Sequence

ATGTCTGTGTACGATGCGGCGTTTGTGAACAGTGAGTTATCGAAGAACACTTCGATATTT
GGATTGAAATTGTGGGTGGTGATTGGGATCTTTGTTGGAGCTGTATTTGTTCTCATACTC
TTCCTTCTGTCACTCTGTATCACCGCTTCTCGCCGCCGCACTACCACCCAAAAAGGCAAA
CTCCACCGTCCTATCAATTCTGAGCTTACCCCAGTTGTCTCCAAGGAAATCCAAGAGATT
GTCCACCATGACACCGCCCCAGATCACCGCCCCATTGTCCTTCAGGCTGTGCCAGAAATA
CAGATCAACATGGGGAAGGTGGAGCACAGAGTGGTGTTTTCAGACAAGATGCCTGGGGCA
TCAAGCGGTGAGAGTAGGGCGACTAGTGGGGCTGAAACGGGGTCGTTAGGGAATAGTGGG
CAATTGCCAGAAGTATCACATTTAGGGTGGGGAAGGTGGTATACGCTGAGAGAGCTCGAG
GCTGCCACTAATTGCTTGTCTGATGAGAATGTGATAGGAGAAGGCGGGTATGGAATTGTG
TATCAAGGTGTATTGACTGATGGCACCAGAGTAGCTGTTAAAAATCTCTTGAATAACAGG
GGTCAAGCAGAGAAGGAGTTTAAAGTGGAGGTAGAAGCTATTGGGCGTGTAAGACACAAG
AATCTCGTGAGGCTGCTTGGCTACTGTGTTGAAGGAGCTTACAGGATGCTTGTCTATGAG
TATGTAGATAATGGAACTTTGGAGCAATGGATTCACGGAGATGTTGGGGATGTCAGTCCT
TTGACATGGGATAACAGAATGACTATAATAGTGGGAACAGCAAAAGCTTTAGCATATCTT
CACGAGGGTCTGGAACCTAAAGTTGTTCATCGAGATGTAAAATCCAGCAACGTACTCCTC
GATCGCCAGTGGCATCCAAAGCTGTCCGACTTTGGGCTTGCTAAACTCCTCAATGCAGAG
AGGAGTTATGTGACAACTCGTGTAATGGGAACATTTGGTTATGTTGCACCAGAATATGCT
TGTACCGGCATGCTTAATGAGAAGAGTGACATTTATAGCTTTGGAATACTTATCATGGAG
ATAATTACTGGGAGAACTCCTGTTGATTATGGTAGACCAAAAGGCGAGACTAATTTGGTG
GAGTGGTTAAAAATGATGGTTGGGAATCGAAAATCTGAGGAAGTGGTTGATCCTAAGTTG
CCTGAAATGCCTTCTTCAAAAGGACTCAAGCGTGCTCTTTTGGTTGCTCTTCGGTGTGTT
GATCCTGATGCTCAAAAGAGGCCTAAAATGGGACACATTATCCACATGCTAGAGGCGGAT
GACCTGCTGGTTCGTGATGAACGTCGTATTGGTAGAGAAAGAGAATCGTCTAATTCCCAC
CGTGACTACAAACAAGACAACCAAGCTGGTCCCAAGTTATCCAGAAAACAATATGGTGAT
GGAGCACCAGAAACTAGTGAAGGAGATAGTAGTAGAAACCATAATTTGCCATCTAGTTGG
AGATAG