Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000148
CDS Infomation

pacid=37437806 polypeptide=PGSC0003DMP400000109 locus=PGSC0003DMG400000043 ID=PGSC0003DMT400000148.v4.03 annot-version=v4.03
Sequence

ATGTCATGCAGAGAAAGTAAGCCAGAGAGACTTAATACAGACAGTGTGTCACCGTCAATT
CCAGCAAGTCCAGTTAATGATATTGTTGTGAGATCAGGATCTGTGACAGAAGGTTACAGC
GAACAAGTAAAGCTCAGGGGGGCTTTTACAGAATATCCCAGAGTTGCTTCTGACAATCAC
GGGATAATCTTATCTGGACTTCCCTCTGGTGGGACTTTACAGGCTAATTTTCCACTCATG
AGTTCAGATAGAAGTGCTGATAGCTGGGATGGCATACCGCGAATAAGTTCCTCAGTGGCT
TCACGTTTTTCATCAAGTTCATCTGTTGAAATGGTTGATGATTCCTTTTCAAAGACTGAA
AGGAACGAGACTGCATTAGATCCATCCGGACTGCGCTATTTCAATTTCGGTCCTCATCAG
TCGTCTGCTCCAAGTATAGCAGAGAGGGTGAATTATGAGCTAGCTGGAAGCATGAACGAT
GAACTCTATGATAGATATGAGCAGCATGTTGCAGAAGCAGAAACCGCTAGGCGGGAAGCT
TTTGAAGAATCAATCAAGCGTAGGAAAGCGGAAAAGGATGCAATTGAGGCTAGACGAAGG
GCAAAAGCATCAGAAACATTCTATGCTGATGAGTTGAGACGGAGGAGAGAAATAGAGGAA
GCACTTGCAAAAGACAAAGAAAAAGCTGATCAGATGAAAGCACAGCTAAACAAACTTCTG
AGAGATCTGCAAGCAGCTCAAGCACAGAACTCTTCACTGGAGAGTCAACTCTTAGATTCT
GACACTCAGGTACAAGAGTTGGAACAGAAAATGTTCTCTGCAGTTGACCTTTTGCAGAAG
TACAGGAAGGAGAGAGATGAATTGGAGGTGGAGCGTGATGATGCACTCAAATCAGCAGAG
GCACTGAGGGAACAGCACTCAGACGGGTCTTCATTTACATCTACATCTTCACTATTTGCT
GAATTTTATTTTCATGAAATTGAAGAAGCTACTCGGACTTTCGACCCAGCCTTGAAGATT
GGAGAAGGTGGTTATGGATGCATTTATAGAGGCCTCCTTCGCCACACTCAAGTGGCAGTA
AAGATGCTGCACCCTCATAGCTTGCAAGGGCCCTCAGAGTTCCAACAGGAGGTCAATATT
TTAAGCAAGTTGAGGCATCCAAATGTTGTCACTCTTATAGGAGCGTGTCCAGAAGCATGG
ACTCTTGTATATGAGTATCTTCCCAACGGAAGCCTAGAAGATCGTCTTACCTGCAAAGAT
AACACACCTCCACTGTCGTGGCAAACTCGAATCCGTGTAGCAGCAGAGCTCTGTTGTGCT
CTCATCTTCCTCCATTCCTGCACTGCTCGGGGCATAATTCATGGTGATCTAAAACCAGCA
AATGTTTTACTTGATGCGAACTTTGTGAGCAAGCTTAGTGACTTTGGAATTTGTCGAGTT
CTCTCAGAAGATGACTTTTCAGAAAATAGTACTACACTTTGTTACAGAACTGACCCAAAA
GGCACATTCGCATACATGGACCCTGAATTCCTCGAAACAGGAGAGCTTACTCGAAAGTCC
GATGTCTATTCATTTGGGATTATATTACTTAGGTTGTTAACTGGAAGATCTGCATTGGGG
ATAAAAAATGAAATCCAATATGCACTGGATAAAGGAAATTTGAAAAATTTGCTGGATCCA
ACTGCTGGAGACTGGCCATTTGTGCAAGCCAAACAGTTGGCTCACTTAGCTATGAGTTGT
TGTGAAAAGAACAGTAGGTGCCGGCCTGAACTTTCTTCAGAGGTGTGGAAGGTGCTTGAA
CCAATGAGAGCTTCATGTGGGGCATCATCTTTTAGAATGGATTCCGAAGAGCATTGTGAC
ATCCCATCCTATTTTATTTGTCCCATATTTCAGGAAATCATGCAAGATCCTGTAGTAGCA
GCGGATGGCTTCACATACGAAGCAGAAGCATTAAGAGGATGGTTAGACAGCGGGCATGAG
ACCTCCCCTATGACAAACCTCACGCTGTCCCATAAGAACCTTGTTCCTAACCATGCTCTC
CGTTCTGCAATTCAGGAGTGGCTGCAACAGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000109
PEP Infomation

pacid=37437806 transcript=PGSC0003DMT400000148 locus=PGSC0003DMG400000043 ID=PGSC0003DMT400000148.v4.03 annot-version=v4.03
Sequence

MSCRESKPERLNTDSVSPSIPASPVNDIVVRSGSVTEGYSEQVKLRGAFTEYPRVASDNH
GIILSGLPSGGTLQANFPLMSSDRSADSWDGIPRISSSVASRFSSSSSVEMVDDSFSKTE
RNETALDPSGLRYFNFGPHQSSAPSIAERVNYELAGSMNDELYDRYEQHVAEAETARREA
FEESIKRRKAEKDAIEARRRAKASETFYADELRRRREIEEALAKDKEKADQMKAQLNKLL
RDLQAAQAQNSSLESQLLDSDTQVQELEQKMFSAVDLLQKYRKERDELEVERDDALKSAE
ALREQHSDGSSFTSTSSLFAEFYFHEIEEATRTFDPALKIGEGGYGCIYRGLLRHTQVAV
KMLHPHSLQGPSEFQQEVNILSKLRHPNVVTLIGACPEAWTLVYEYLPNGSLEDRLTCKD
NTPPLSWQTRIRVAAELCCALIFLHSCTARGIIHGDLKPANVLLDANFVSKLSDFGICRV
LSEDDFSENSTTLCYRTDPKGTFAYMDPEFLETGELTRKSDVYSFGIILLRLLTGRSALG
IKNEIQYALDKGNLKNLLDPTAGDWPFVQAKQLAHLAMSCCEKNSRCRPELSSEVWKVLE
PMRASCGASSFRMDSEEHCDIPSYFICPIFQEIMQDPVVAADGFTYEAEALRGWLDSGHE
TSPMTNLTLSHKNLVPNHALRSAIQEWLQQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400000148
Transcript Infomation

pacid=37437806 locus=PGSC0003DMG400000043 ID=PGSC0003DMT400000148.v4.03 annot-version=v4.03
Sequence

ATGTCATGCAGAGAAAGTAAGCCAGAGAGACTTAATACAGACAGTGTGTCACCGTCAATT
CCAGCAAGTCCAGTTAATGATATTGTTGTGAGATCAGGATCTGTGACAGAAGGTTACAGC
GAACAAGTAAAGCTCAGGGGGGCTTTTACAGAATATCCCAGAGTTGCTTCTGACAATCAC
GGGATAATCTTATCTGGACTTCCCTCTGGTGGGACTTTACAGGCTAATTTTCCACTCATG
AGTTCAGATAGAAGTGCTGATAGCTGGGATGGCATACCGCGAATAAGTTCCTCAGTGGCT
TCACGTTTTTCATCAAGTTCATCTGTTGAAATGGTTGATGATTCCTTTTCAAAGACTGAA
AGGAACGAGACTGCATTAGATCCATCCGGACTGCGCTATTTCAATTTCGGTCCTCATCAG
TCGTCTGCTCCAAGTATAGCAGAGAGGGTGAATTATGAGCTAGCTGGAAGCATGAACGAT
GAACTCTATGATAGATATGAGCAGCATGTTGCAGAAGCAGAAACCGCTAGGCGGGAAGCT
TTTGAAGAATCAATCAAGCGTAGGAAAGCGGAAAAGGATGCAATTGAGGCTAGACGAAGG
GCAAAAGCATCAGAAACATTCTATGCTGATGAGTTGAGACGGAGGAGAGAAATAGAGGAA
GCACTTGCAAAAGACAAAGAAAAAGCTGATCAGATGAAAGCACAGCTAAACAAACTTCTG
AGAGATCTGCAAGCAGCTCAAGCACAGAACTCTTCACTGGAGAGTCAACTCTTAGATTCT
GACACTCAGGTACAAGAGTTGGAACAGAAAATGTTCTCTGCAGTTGACCTTTTGCAGAAG
TACAGGAAGGAGAGAGATGAATTGGAGGTGGAGCGTGATGATGCACTCAAATCAGCAGAG
GCACTGAGGGAACAGCACTCAGACGGGTCTTCATTTACATCTACATCTTCACTATTTGCT
GAATTTTATTTTCATGAAATTGAAGAAGCTACTCGGACTTTCGACCCAGCCTTGAAGATT
GGAGAAGGTGGTTATGGATGCATTTATAGAGGCCTCCTTCGCCACACTCAAGTGGCAGTA
AAGATGCTGCACCCTCATAGCTTGCAAGGGCCCTCAGAGTTCCAACAGGAGGTCAATATT
TTAAGCAAGTTGAGGCATCCAAATGTTGTCACTCTTATAGGAGCGTGTCCAGAAGCATGG
ACTCTTGTATATGAGTATCTTCCCAACGGAAGCCTAGAAGATCGTCTTACCTGCAAAGAT
AACACACCTCCACTGTCGTGGCAAACTCGAATCCGTGTAGCAGCAGAGCTCTGTTGTGCT
CTCATCTTCCTCCATTCCTGCACTGCTCGGGGCATAATTCATGGTGATCTAAAACCAGCA
AATGTTTTACTTGATGCGAACTTTGTGAGCAAGCTTAGTGACTTTGGAATTTGTCGAGTT
CTCTCAGAAGATGACTTTTCAGAAAATAGTACTACACTTTGTTACAGAACTGACCCAAAA
GGCACATTCGCATACATGGACCCTGAATTCCTCGAAACAGGAGAGCTTACTCGAAAGTCC
GATGTCTATTCATTTGGGATTATATTACTTAGGTTGTTAACTGGAAGATCTGCATTGGGG
ATAAAAAATGAAATCCAATATGCACTGGATAAAGGAAATTTGAAAAATTTGCTGGATCCA
ACTGCTGGAGACTGGCCATTTGTGCAAGCCAAACAGTTGGCTCACTTAGCTATGAGTTGT
TGTGAAAAGAACAGTAGGTGCCGGCCTGAACTTTCTTCAGAGGTGTGGAAGGTGCTTGAA
CCAATGAGAGCTTCATGTGGGGCATCATCTTTTAGAATGGATTCCGAAGAGCATTGTGAC
ATCCCATCCTATTTTATTTGTCCCATATTTCAGGAAATCATGCAAGATCCTGTAGTAGCA
GCGGATGGCTTCACATACGAAGCAGAAGCATTAAGAGGATGGTTAGACAGCGGGCATGAG
ACCTCCCCTATGACAAACCTCACGCTGTCCCATAAGAACCTTGTTCCTAACCATGCTCTC
CGTTCTGCAATTCAGGAGTGGCTGCAACAGAATTGA